Atomistry » Iron » PDB 6bpt-6cd3 » 6c76
Atomistry »
  Iron »
    PDB 6bpt-6cd3 »
      6c76 »

Iron in PDB 6c76: Structure of Iron Containing Alcohol Dehydrogenase From Thermococcus Thioreducens in An Orthorhombic Crystal Form

Protein crystallography data

The structure of Structure of Iron Containing Alcohol Dehydrogenase From Thermococcus Thioreducens in An Orthorhombic Crystal Form, PDB code: 6c76 was solved by S.B.Larson, A.Mcpherson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.04 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 48.920, 111.978, 142.081, 90.00, 90.00, 90.00
R / Rfree (%) 15.4 / 20.4

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Iron Containing Alcohol Dehydrogenase From Thermococcus Thioreducens in An Orthorhombic Crystal Form (pdb code 6c76). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of Iron Containing Alcohol Dehydrogenase From Thermococcus Thioreducens in An Orthorhombic Crystal Form, PDB code: 6c76:

Iron binding site 1 out of 1 in 6c76

Go back to Iron Binding Sites List in 6c76
Iron binding site 1 out of 1 in the Structure of Iron Containing Alcohol Dehydrogenase From Thermococcus Thioreducens in An Orthorhombic Crystal Form


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Iron Containing Alcohol Dehydrogenase From Thermococcus Thioreducens in An Orthorhombic Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe401

b:65.3
occ:1.00
H5N A:NAP402 1.9 32.9 1.0
NE2 A:HIS260 2.4 43.3 1.0
NE2 A:HIS272 2.4 35.3 1.0
OD2 A:ASP193 2.5 36.5 1.0
NE2 A:HIS197 2.5 29.5 1.0
OD1 A:ASP193 2.5 41.0 1.0
CG A:ASP193 2.8 33.9 1.0
C5N A:NAP402 2.9 31.3 1.0
HD2 A:HIS272 3.1 34.9 1.0
CD2 A:HIS260 3.2 36.5 1.0
CD2 A:HIS272 3.2 33.6 1.0
HD2 A:HIS260 3.2 37.2 1.0
CD2 A:HIS197 3.3 27.0 1.0
CE1 A:HIS197 3.3 28.7 1.0
H6N A:NAP402 3.4 32.1 1.0
CE1 A:HIS260 3.4 41.8 1.0
HD2 A:HIS197 3.4 26.9 1.0
HE1 A:HIS197 3.5 28.4 1.0
CE1 A:HIS272 3.6 42.4 1.0
C6N A:NAP402 3.6 32.3 1.0
HE1 A:HIS260 3.7 41.5 1.0
HE1 A:HIS272 3.9 40.4 1.0
OD1 A:ASN276 4.0 41.2 1.0
C4N A:NAP402 4.0 35.5 1.0
H4N A:NAP402 4.1 32.8 1.0
O A:HOH633 4.3 41.3 1.0
CB A:ASP193 4.3 27.8 1.0
ND1 A:HIS197 4.3 27.4 1.0
CG A:HIS197 4.3 24.1 1.0
CG A:HIS260 4.4 33.6 1.0
CG A:HIS272 4.4 37.1 1.0
ND1 A:HIS260 4.5 40.7 1.0
ND1 A:HIS272 4.6 42.2 1.0
HB3 A:ASP193 4.6 28.1 1.0
HD13 A:LEU256 4.6 30.8 1.0
HA A:ASP193 4.7 24.2 1.0
HA A:ALA143 4.7 21.0 1.0
HB2 A:ASP193 4.8 28.2 1.0
CG A:ASN276 4.8 36.0 1.0
O A:ASP193 4.9 21.5 1.0
N1N A:NAP402 4.9 31.4 1.0
H2D A:NAP402 5.0 31.5 1.0
HD12 A:LEU256 5.0 30.7 1.0
CA A:ASP193 5.0 24.1 1.0

Reference:

S.B.Larson, J.A.Jones, A.Mcpherson. The Structure of An Iron-Containing Alcohol Dehydrogenase From A Hyperthermophilic Archaeon in Two Chemical States. Acta Crystallogr F Struct V. 75 217 2019BIOL Commun.
ISSN: ESSN 2053-230X
PubMed: 30950821
DOI: 10.1107/S2053230X19001201
Page generated: Sun Dec 13 16:22:07 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy