Atomistry » Iron » PDB 6cdh-6cww » 6cdq
Atomistry »
  Iron »
    PDB 6cdh-6cww »
      6cdq »

Iron in PDB 6cdq: Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound.

Enzymatic activity of Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound.

All present enzymatic activity of Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound.:
1.11.1.21;

Protein crystallography data

The structure of Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound., PDB code: 6cdq was solved by P.C.Loewen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 174.10 / 1.92
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 100.531, 114.896, 174.099, 90.00, 90.00, 90.00
R / Rfree (%) 16.6 / 19.9

Other elements in 6cdq:

The structure of Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound. also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Sodium (Na) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound. (pdb code 6cdq). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound., PDB code: 6cdq:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 6cdq

Go back to Iron Binding Sites List in 6cdq
Iron binding site 1 out of 2 in the Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe801

b:21.2
occ:1.00
FE A:HEM801 0.0 21.2 1.0
ND A:HEM801 1.9 18.6 1.0
NE2 A:HIS279 2.0 22.7 1.0
NA A:HEM801 2.0 18.9 1.0
NB A:HEM801 2.0 18.8 1.0
NC A:HEM801 2.1 17.7 1.0
O A:HOH915 2.6 32.1 1.0
C1D A:HEM801 3.0 18.2 1.0
C4D A:HEM801 3.0 18.1 1.0
CE1 A:HIS279 3.0 22.9 1.0
C1A A:HEM801 3.0 18.3 1.0
C4A A:HEM801 3.0 20.7 1.0
CD2 A:HIS279 3.0 21.0 1.0
C4C A:HEM801 3.0 18.8 1.0
C1B A:HEM801 3.0 20.2 1.0
C4B A:HEM801 3.0 19.9 1.0
C1C A:HEM801 3.1 17.8 1.0
CHB A:HEM801 3.4 20.3 1.0
CHA A:HEM801 3.4 19.1 1.0
CHD A:HEM801 3.4 19.2 1.0
CHC A:HEM801 3.4 18.0 1.0
O1 A:OXY808 4.0 46.4 1.0
ND1 A:HIS279 4.1 22.5 1.0
CG A:HIS279 4.2 22.1 1.0
C2D A:HEM801 4.2 19.0 1.0
C3D A:HEM801 4.2 18.7 1.0
C3A A:HEM801 4.2 20.5 1.0
C2A A:HEM801 4.2 19.8 1.0
C3C A:HEM801 4.3 19.0 1.0
C2B A:HEM801 4.3 20.9 1.0
C2C A:HEM801 4.3 18.4 1.0
C3B A:HEM801 4.3 19.6 1.0
NE1 A:TRP111 4.3 20.4 1.0
O1 A:OXY804 4.4 40.7 1.0
CD1 A:TRP111 4.6 22.2 1.0
O2 A:OXY808 4.9 42.5 1.0

Iron binding site 2 out of 2 in 6cdq

Go back to Iron Binding Sites List in 6cdq
Iron binding site 2 out of 2 in the Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of the W202F Variant of Catalase-Peroxidase From B. Pseudomallei with Inh Bound. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe801

b:18.7
occ:1.00
FE B:HEM801 0.0 18.7 1.0
ND B:HEM801 1.9 16.8 1.0
NA B:HEM801 2.0 17.9 1.0
NE2 B:HIS279 2.0 20.1 1.0
NB B:HEM801 2.0 16.2 1.0
NC B:HEM801 2.1 17.3 1.0
O B:HOH1199 2.5 32.5 1.0
C1D B:HEM801 2.9 15.4 1.0
C4D B:HEM801 3.0 16.3 1.0
C4B B:HEM801 3.0 16.9 1.0
CD2 B:HIS279 3.0 19.3 1.0
C1A B:HEM801 3.0 17.9 1.0
C4C B:HEM801 3.0 17.9 1.0
CE1 B:HIS279 3.0 19.7 1.0
C1B B:HEM801 3.0 17.6 1.0
C4A B:HEM801 3.1 19.0 1.0
C1C B:HEM801 3.1 17.6 1.0
CHD B:HEM801 3.4 17.4 1.0
CHA B:HEM801 3.4 17.3 1.0
CHB B:HEM801 3.4 17.3 1.0
CHC B:HEM801 3.4 17.9 1.0
O2 B:OXY807 4.0 37.9 1.0
ND1 B:HIS279 4.1 18.2 1.0
CG B:HIS279 4.2 21.0 1.0
C2D B:HEM801 4.2 16.1 1.0
C3D B:HEM801 4.2 17.4 1.0
O1 B:OXY807 4.3 51.4 1.0
C2A B:HEM801 4.3 18.0 1.0
C3C B:HEM801 4.3 16.7 1.0
C2C B:HEM801 4.3 15.5 1.0
C3B B:HEM801 4.3 16.6 1.0
C3A B:HEM801 4.3 18.3 1.0
C2B B:HEM801 4.3 17.1 1.0
NE1 B:TRP111 4.3 18.8 1.0
CD1 B:TRP111 4.5 18.1 1.0
O1 B:OXY804 4.7 33.5 1.0

Reference:

P.C.Loewen, P.C.Loewen. N/A N/A.
Page generated: Tue Aug 6 14:57:30 2024

Last articles

Mg in 4Y52
Mg in 4Y30
Mg in 4Y2V
Mg in 4Y2X
Mg in 4Y2Y
Mg in 4Y2U
Mg in 4Y2T
Mg in 4Y2Q
Mg in 4Y2R
Mg in 4Y2S
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy