Iron in PDB 6cvc: Mycobacterium Marinum Cytochrome P450 CYP124A1 in the Substrate-Free Form

Protein crystallography data

The structure of Mycobacterium Marinum Cytochrome P450 CYP124A1 in the Substrate-Free Form, PDB code: 6cvc was solved by S.A.Child, J.B.Bruning, S.G.Bell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.19 / 2.20
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 98.776, 72.359, 65.602, 90.00, 109.72, 90.00
R / Rfree (%) 20.4 / 25.4

Iron Binding Sites:

The binding sites of Iron atom in the Mycobacterium Marinum Cytochrome P450 CYP124A1 in the Substrate-Free Form (pdb code 6cvc). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Mycobacterium Marinum Cytochrome P450 CYP124A1 in the Substrate-Free Form, PDB code: 6cvc:

Iron binding site 1 out of 1 in 6cvc

Go back to Iron Binding Sites List in 6cvc
Iron binding site 1 out of 1 in the Mycobacterium Marinum Cytochrome P450 CYP124A1 in the Substrate-Free Form


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Mycobacterium Marinum Cytochrome P450 CYP124A1 in the Substrate-Free Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:14.8
occ:1.00
FE A:HEM501 0.0 14.8 1.0
NC A:HEM501 2.0 8.3 1.0
ND A:HEM501 2.0 14.3 1.0
NB A:HEM501 2.0 10.8 1.0
NA A:HEM501 2.1 12.2 1.0
SG A:CYS379 2.3 17.1 1.0
O A:HOH674 2.7 34.9 1.0
C4C A:HEM501 3.0 9.4 1.0
C1D A:HEM501 3.1 11.3 1.0
C1C A:HEM501 3.1 12.6 1.0
C1B A:HEM501 3.1 11.0 1.0
C4A A:HEM501 3.1 14.2 1.0
C4B A:HEM501 3.1 10.0 1.0
C4D A:HEM501 3.1 13.3 1.0
C1A A:HEM501 3.1 12.4 1.0
CHD A:HEM501 3.4 13.6 1.0
CHB A:HEM501 3.4 14.0 1.0
CHC A:HEM501 3.4 9.2 1.0
CB A:CYS379 3.4 13.7 1.0
CHA A:HEM501 3.5 12.0 1.0
O A:ALA267 3.9 20.4 1.0
CA A:CYS379 4.1 11.0 1.0
C3C A:HEM501 4.3 11.1 1.0
C2D A:HEM501 4.3 14.6 1.0
C2C A:HEM501 4.3 10.7 1.0
C3D A:HEM501 4.3 13.4 1.0
C2B A:HEM501 4.3 12.9 1.0
C3A A:HEM501 4.3 15.1 1.0
C3B A:HEM501 4.3 13.9 1.0
C2A A:HEM501 4.3 11.2 1.0
C A:ALA267 4.8 17.9 1.0
C A:CYS379 4.8 15.5 1.0
N A:LEU380 4.8 15.6 1.0
N A:GLY381 5.0 15.4 1.0

Reference:

S.A.Child, J.B.Bruning, S.G.Bell. A Comparison of the Steroid Binding Cytochrome P450S From Mycobacterium Marinum and Mycobacterium Tuberculosis To Be Published.
Page generated: Sun Dec 13 16:23:31 2020

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