Iron in PDB 6ecj: Human Cytochrome C G41T

The structure of Human Cytochrome C G41T, PDB code: 6ecj was solved by M.Fellner, G.N.L.Jameson, E.C.Ledgerwood, S.M.Wilbanks, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	65.06 / 2.70
Space group	P 2 21 21
Cell size a, b, c (Å), α, β, γ (°)	65.060, 76.170, 232.830, 90.00, 90.00, 90.00
R / Rfree (%)	21.5 / 24.9

The binding sites of Iron atom in the Human Cytochrome C G41T (pdb code 6ecj). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the Human Cytochrome C G41T, PDB code: 6ecj:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Iron binding site 1 out of 8 in the Human Cytochrome C G41T


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Human Cytochrome C G41T within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:11.2 occ:1.00 FE A:HEM201 0.0 11.2 1.0 NC A:HEM201 2.0 15.7 1.0 NB A:HEM201 2.0 19.1 1.0 ND A:HEM201 2.0 12.7 1.0 NA A:HEM201 2.0 14.0 1.0 NE2 A:HIS18 2.5 8.5 1.0 SD A:MET80 2.8 23.1 1.0 CD2 A:HIS18 3.0 9.8 1.0 C1C A:HEM201 3.0 14.8 1.0 C1D A:HEM201 3.0 11.9 1.0 C4B A:HEM201 3.1 14.8 1.0 C4C A:HEM201 3.1 11.8 1.0 C1B A:HEM201 3.1 14.7 1.0 C4A A:HEM201 3.1 13.4 1.0 C4D A:HEM201 3.1 12.0 1.0 C1A A:HEM201 3.1 15.6 1.0 CG A:MET80 3.3 16.5 1.0 CHC A:HEM201 3.4 15.3 1.0 CHD A:HEM201 3.4 12.0 1.0 CHB A:HEM201 3.4 16.6 1.0 CHA A:HEM201 3.4 11.4 1.0 CE A:MET80 3.4 16.8 1.0 CE1 A:HIS18 3.7 13.4 1.0 CB A:MET80 4.2 15.9 1.0 C2D A:HEM201 4.3 14.2 1.0 C3D A:HEM201 4.3 14.9 1.0 C2C A:HEM201 4.3 11.2 1.0 C3B A:HEM201 4.3 16.5 1.0 C3A A:HEM201 4.3 14.6 1.0 C3C A:HEM201 4.3 11.4 1.0 C2B A:HEM201 4.3 17.6 1.0 C2A A:HEM201 4.3 17.0 1.0 CG A:HIS18 4.3 12.8 1.0 ND1 A:HIS18 4.6 16.0 1.0 OH A:TYR67 4.9 17.4 1.0

Iron binding site 2 out of 8 in the Human Cytochrome C G41T


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Human Cytochrome C G41T within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe201 b:11.2 occ:1.00 FE B:HEM201 0.0 11.2 1.0 NB B:HEM201 2.0 14.2 1.0 NC B:HEM201 2.0 15.4 1.0 NA B:HEM201 2.0 12.9 1.0 ND B:HEM201 2.0 10.0 1.0 NE2 B:HIS18 2.5 10.4 1.0 SD B:MET80 2.8 11.0 1.0 CD2 B:HIS18 3.0 11.7 1.0 C4B B:HEM201 3.0 14.3 1.0 C1B B:HEM201 3.0 14.2 1.0 C4A B:HEM201 3.0 13.6 1.0 C1C B:HEM201 3.1 12.2 1.0 C1D B:HEM201 3.1 10.3 1.0 C4C B:HEM201 3.1 12.0 1.0 C1A B:HEM201 3.1 11.9 1.0 C4D B:HEM201 3.1 10.1 1.0 CG B:MET80 3.3 10.4 1.0 CHC B:HEM201 3.4 13.2 1.0 CHB B:HEM201 3.4 14.7 1.0 CHD B:HEM201 3.4 12.7 1.0 CHA B:HEM201 3.4 10.4 1.0 CE B:MET80 3.5 13.2 1.0 CE1 B:HIS18 3.7 18.6 1.0 CB B:MET80 4.2 12.0 1.0 C2B B:HEM201 4.3 14.1 1.0 C3B B:HEM201 4.3 15.3 1.0 C3A B:HEM201 4.3 16.4 1.0 C2A B:HEM201 4.3 12.4 1.0 C2D B:HEM201 4.3 9.4 1.0 C2C B:HEM201 4.3 15.1 1.0 C3C B:HEM201 4.3 12.8 1.0 C3D B:HEM201 4.3 10.2 1.0 CG B:HIS18 4.3 15.3 1.0 ND1 B:HIS18 4.6 19.6 1.0 OH B:TYR67 4.9 8.4 1.0

Iron binding site 3 out of 8 in the Human Cytochrome C G41T


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Human Cytochrome C G41T within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe201 b:8.3 occ:1.00 FE C:HEM201 0.0 8.3 1.0 NC C:HEM201 2.0 11.2 1.0 NB C:HEM201 2.0 9.8 1.0 ND C:HEM201 2.0 10.4 1.0 NA C:HEM201 2.0 8.7 1.0 NE2 C:HIS18 2.5 7.5 1.0 SD C:MET80 2.8 13.9 1.0 CD2 C:HIS18 3.0 8.7 1.0 C4B C:HEM201 3.0 9.8 1.0 C1C C:HEM201 3.0 11.6 1.0 C1D C:HEM201 3.0 10.7 1.0 C4D C:HEM201 3.0 9.5 1.0 C4C C:HEM201 3.1 10.2 1.0 C1B C:HEM201 3.1 9.5 1.0 C1A C:HEM201 3.1 10.7 1.0 C4A C:HEM201 3.1 9.0 1.0 CG C:MET80 3.3 8.7 1.0 CHC C:HEM201 3.4 11.3 1.0 CHD C:HEM201 3.4 10.0 1.0 CHA C:HEM201 3.4 10.7 1.0 CHB C:HEM201 3.4 10.7 1.0 CE C:MET80 3.5 10.7 1.0 CE1 C:HIS18 3.7 12.7 1.0 CB C:MET80 4.2 8.8 1.0 C3B C:HEM201 4.3 10.4 1.0 C2C C:HEM201 4.3 12.0 1.0 C3D C:HEM201 4.3 10.1 1.0 C2D C:HEM201 4.3 10.9 1.0 C2B C:HEM201 4.3 13.9 1.0 C3C C:HEM201 4.3 10.4 1.0 C3A C:HEM201 4.3 9.4 1.0 C2A C:HEM201 4.3 10.8 1.0 CG C:HIS18 4.3 10.9 1.0 ND1 C:HIS18 4.6 15.6 1.0 OH C:TYR67 4.9 9.2 1.0

Iron binding site 4 out of 8 in the Human Cytochrome C G41T


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Human Cytochrome C G41T within 5.0Å range: probe atom residue distance (Å) B Occ D:Fe201 b:8.4 occ:1.00 FE D:HEM201 0.0 8.4 1.0 NC D:HEM201 2.0 10.6 1.0 NB D:HEM201 2.0 11.4 1.0 NA D:HEM201 2.0 12.8 1.0 ND D:HEM201 2.0 11.1 1.0 NE2 D:HIS18 2.5 10.0 1.0 SD D:MET80 2.8 13.0 1.0 CD2 D:HIS18 3.0 10.8 1.0 C1C D:HEM201 3.0 11.1 1.0 C4B D:HEM201 3.0 10.3 1.0 C4C D:HEM201 3.0 11.5 1.0 C1D D:HEM201 3.1 9.6 1.0 C1B D:HEM201 3.1 9.5 1.0 C4A D:HEM201 3.1 12.1 1.0 C1A D:HEM201 3.1 11.8 1.0 C4D D:HEM201 3.1 11.0 1.0 CG D:MET80 3.3 9.5 1.0 CHC D:HEM201 3.4 10.6 1.0 CHD D:HEM201 3.4 12.7 1.0 CHB D:HEM201 3.4 11.3 1.0 CHA D:HEM201 3.4 9.5 1.0 CE D:MET80 3.4 10.6 1.0 CE1 D:HIS18 3.7 15.0 1.0 CB D:MET80 4.2 11.0 1.0 C2C D:HEM201 4.3 13.6 1.0 C3B D:HEM201 4.3 13.5 1.0 C2D D:HEM201 4.3 10.8 1.0 C3C D:HEM201 4.3 11.7 1.0 C2B D:HEM201 4.3 12.8 1.0 C3A D:HEM201 4.3 14.1 1.0 C2A D:HEM201 4.3 10.4 1.0 C3D D:HEM201 4.3 11.6 1.0 CG D:HIS18 4.3 11.9 1.0 ND1 D:HIS18 4.6 17.4 1.0 OH D:TYR67 4.9 9.1 1.0

Iron binding site 5 out of 8 in the Human Cytochrome C G41T


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Human Cytochrome C G41T within 5.0Å range: probe atom residue distance (Å) B Occ E:Fe201 b:16.3 occ:1.00 FE E:HEM201 0.0 16.3 1.0 ND E:HEM201 2.0 18.3 1.0 NA E:HEM201 2.0 20.0 1.0 NC E:HEM201 2.0 23.5 1.0 NB E:HEM201 2.0 20.6 1.0 NE2 E:HIS18 2.5 13.4 1.0 SD E:MET80 2.8 26.4 1.0 CD2 E:HIS18 3.0 17.1 1.0 C1A E:HEM201 3.0 21.2 1.0 C1D E:HEM201 3.0 17.5 1.0 C4A E:HEM201 3.0 22.6 1.0 C4D E:HEM201 3.1 20.6 1.0 C4B E:HEM201 3.1 20.3 1.0 C1C E:HEM201 3.1 20.7 1.0 C4C E:HEM201 3.1 19.8 1.0 C1B E:HEM201 3.1 21.2 1.0 CG E:MET80 3.3 19.0 1.0 CHC E:HEM201 3.4 21.8 1.0 CHA E:HEM201 3.4 22.1 1.0 CHD E:HEM201 3.4 18.6 1.0 CHB E:HEM201 3.4 23.1 1.0 CE E:MET80 3.5 16.1 1.0 CE1 E:HIS18 3.7 22.1 1.0 CB E:MET80 4.2 18.1 1.0 C2A E:HEM201 4.3 23.4 1.0 C3A E:HEM201 4.3 22.4 1.0 C2D E:HEM201 4.3 18.3 1.0 C3D E:HEM201 4.3 18.3 1.0 C2C E:HEM201 4.3 19.2 1.0 C3B E:HEM201 4.3 21.8 1.0 C2B E:HEM201 4.3 22.7 1.0 C3C E:HEM201 4.3 21.8 1.0 CG E:HIS18 4.3 21.6 1.0 ND1 E:HIS18 4.6 23.5 1.0 OH E:TYR67 4.9 20.3 1.0

Iron binding site 6 out of 8 in the Human Cytochrome C G41T


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Human Cytochrome C G41T within 5.0Å range: probe atom residue distance (Å) B Occ F:Fe201 b:19.0 occ:1.00 FE F:HEM201 0.0 19.0 1.0 ND F:HEM201 2.0 21.4 1.0 NB F:HEM201 2.0 24.9 1.0 NA F:HEM201 2.0 26.2 1.0 NC F:HEM201 2.0 33.1 1.0 NE2 F:HIS18 2.5 17.7 1.0 SD F:MET80 2.8 34.9 1.0 C1D F:HEM201 3.0 23.5 1.0 C4D F:HEM201 3.1 23.6 1.0 C4B F:HEM201 3.1 26.4 1.0 C1A F:HEM201 3.1 23.8 1.0 C4A F:HEM201 3.1 27.6 1.0 C1C F:HEM201 3.1 27.9 1.0 C1B F:HEM201 3.1 24.1 1.0 C4C F:HEM201 3.1 23.9 1.0 CD2 F:HIS18 3.1 20.4 1.0 CG F:MET80 3.3 25.1 1.0 CHC F:HEM201 3.4 26.1 1.0 CHA F:HEM201 3.4 21.3 1.0 CHD F:HEM201 3.4 23.7 1.0 CHB F:HEM201 3.4 26.5 1.0 CE F:MET80 3.5 28.5 1.0 CE1 F:HIS18 3.7 24.3 1.0 CB F:MET80 4.1 25.1 1.0 C2D F:HEM201 4.3 25.5 1.0 C3D F:HEM201 4.3 24.0 1.0 C3A F:HEM201 4.3 27.1 1.0 C2A F:HEM201 4.3 21.9 1.0 C3B F:HEM201 4.3 26.1 1.0 C2B F:HEM201 4.3 22.9 1.0 C2C F:HEM201 4.3 28.6 1.0 C3C F:HEM201 4.3 26.6 1.0 CG F:HIS18 4.4 23.1 1.0 ND1 F:HIS18 4.6 22.1 1.0 OH F:TYR67 4.8 18.8 1.0

Iron binding site 7 out of 8 in the Human Cytochrome C G41T


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Human Cytochrome C G41T within 5.0Å range: probe atom residue distance (Å) B Occ G:Fe201 b:24.5 occ:1.00 FE G:HEM201 0.0 24.5 1.0 ND G:HEM201 2.0 26.1 1.0 NC G:HEM201 2.0 35.0 1.0 NB G:HEM201 2.0 27.8 1.0 NA G:HEM201 2.1 31.7 1.0 NE2 G:HIS18 2.5 26.6 1.0 SD G:MET80 2.8 35.1 1.0 CD2 G:HIS18 3.0 29.3 1.0 C1C G:HEM201 3.0 33.9 1.0 C1D G:HEM201 3.0 28.4 1.0 C4D G:HEM201 3.0 27.9 1.0 C4B G:HEM201 3.1 27.4 1.0 C4C G:HEM201 3.1 30.7 1.0 C1A G:HEM201 3.1 29.5 1.0 C4A G:HEM201 3.1 28.3 1.0 C1B G:HEM201 3.1 29.7 1.0 CG G:MET80 3.2 26.4 1.0 CHC G:HEM201 3.4 31.7 1.0 CHA G:HEM201 3.4 26.7 1.0 CHD G:HEM201 3.4 30.5 1.0 CHB G:HEM201 3.4 26.6 1.0 CE G:MET80 3.5 23.7 1.0 CE1 G:HIS18 3.7 35.8 1.0 CB G:MET80 4.1 27.6 1.0 C2D G:HEM201 4.3 28.6 1.0 C3D G:HEM201 4.3 29.1 1.0 C2C G:HEM201 4.3 32.0 1.0 C2A G:HEM201 4.3 27.7 1.0 C3A G:HEM201 4.3 27.3 1.0 C3C G:HEM201 4.3 33.5 1.0 C3B G:HEM201 4.3 32.2 1.0 C2B G:HEM201 4.3 32.9 1.0 CG G:HIS18 4.3 32.0 1.0 ND1 G:HIS18 4.6 34.2 1.0 OH G:TYR67 4.8 32.0 1.0

Iron binding site 8 out of 8 in the Human Cytochrome C G41T


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Human Cytochrome C G41T within 5.0Å range: probe atom residue distance (Å) B Occ H:Fe201 b:51.5 occ:0.69 FE H:HEM201 0.0 51.5 0.7 ND H:HEM201 2.0 55.4 0.7 NC H:HEM201 2.0 55.9 0.7 NB H:HEM201 2.1 59.6 0.7 NA H:HEM201 2.1 62.1 0.7 NE2 H:HIS18 2.6 52.6 0.7 SD H:MET80 3.0 66.8 0.7 C1D H:HEM201 3.0 52.8 0.7 C4D H:HEM201 3.0 58.6 0.7 C4C H:HEM201 3.1 52.3 0.7 C1C H:HEM201 3.1 53.3 0.7 C4B H:HEM201 3.1 55.9 0.7 C1A H:HEM201 3.1 62.2 0.7 C4A H:HEM201 3.1 62.2 0.7 C1B H:HEM201 3.1 58.1 0.7 CD2 H:HIS18 3.2 58.8 0.7 CHC H:HEM201 3.4 52.5 0.7 CHD H:HEM201 3.4 51.5 0.7 CHA H:HEM201 3.4 59.5 0.7 CHB H:HEM201 3.4 61.5 0.7 CG H:MET80 3.5 54.3 0.7 CE H:MET80 3.6 52.0 0.7 CE1 H:HIS18 3.6 57.0 0.7 C2D H:HEM201 4.2 57.0 0.7 C3D H:HEM201 4.2 58.6 0.7 C2A H:HEM201 4.3 64.4 0.7 C3A H:HEM201 4.3 65.8 0.7 C2C H:HEM201 4.3 50.6 0.7 C3C H:HEM201 4.3 48.3 0.7 C3B H:HEM201 4.3 59.7 0.7 C2B H:HEM201 4.3 59.7 0.7 CG H:HIS18 4.3 59.1 0.7 CB H:MET80 4.4 52.5 0.7 ND1 H:HIS18 4.5 57.7 0.7

M.Fellner, M.Fellner, G.N.L.Jameson, E.C.Ledgerwood, S.M.Wilbanks. N/A N/A.