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Iron in PDB 6f17: Structure of Mb Nmh H64V, V68A Mutant Resting State

Protein crystallography data

The structure of Structure of Mb Nmh H64V, V68A Mutant Resting State, PDB code: 6f17 was solved by M.Tinzl, T.Hayashi, T.Mori, D.Hilvert, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.16 / 1.45
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 39.592, 47.259, 76.200, 90.00, 90.00, 90.00
R / Rfree (%) 18.4 / 21.7

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Mb Nmh H64V, V68A Mutant Resting State (pdb code 6f17). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of Mb Nmh H64V, V68A Mutant Resting State, PDB code: 6f17:

Iron binding site 1 out of 1 in 6f17

Go back to Iron Binding Sites List in 6f17
Iron binding site 1 out of 1 in the Structure of Mb Nmh H64V, V68A Mutant Resting State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Mb Nmh H64V, V68A Mutant Resting State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:15.8
occ:1.00
FE A:HEM201 0.0 15.8 1.0
ND A:HEM201 2.0 18.5 1.0
NA A:HEM201 2.0 17.1 1.0
NC A:HEM201 2.0 13.4 1.0
NB A:HEM201 2.0 16.4 1.0
NE2 A:MHS93 2.2 13.7 1.0
O A:HOH396 2.2 21.9 1.0
C4D A:HEM201 3.0 28.7 1.0
C1A A:HEM201 3.0 23.7 1.0
C1D A:HEM201 3.0 17.2 1.0
C4B A:HEM201 3.0 12.5 1.0
C4A A:HEM201 3.0 17.1 1.0
C1C A:HEM201 3.1 13.4 1.0
C4C A:HEM201 3.1 15.6 1.0
C1B A:HEM201 3.1 14.2 1.0
CE1 A:MHS93 3.1 15.4 1.0
CD2 A:MHS93 3.2 15.9 1.0
CHA A:HEM201 3.4 29.1 1.0
CHC A:HEM201 3.4 12.9 1.0
CHD A:HEM201 3.4 15.0 1.0
CHB A:HEM201 3.5 15.6 1.0
O A:HOH389 4.1 18.1 1.0
C3D A:HEM201 4.2 33.1 1.0
C3A A:HEM201 4.3 23.4 1.0
C2D A:HEM201 4.3 25.7 1.0
C2A A:HEM201 4.3 23.3 1.0
C2C A:HEM201 4.3 13.6 1.0
C3B A:HEM201 4.3 14.0 1.0
C3C A:HEM201 4.3 14.2 1.0
C2B A:HEM201 4.3 12.3 1.0
ND1 A:MHS93 4.3 15.5 1.0
CG A:MHS93 4.4 17.4 1.0

Reference:

T.Hayashi, M.Tinzl, T.Mori, U.Krengel, J.Proppe, J.Soetbeer, D.Klose, G.Jeschke, M.Reiher, D.Hilvert. Capture and Characterization of A Reactive Haem-Carbenoid Complex in An Artificial Metalloenzyme Nat Catal V. 1 2018.
ISSN: ISSN 2520-1158
DOI: 10.1038/S41929-018-0105-6
Page generated: Sun Dec 13 16:25:31 2020

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