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Iron in PDB 6g5b: Heme-Carbene Complex in Myoglobin H64V/V68A Containing An N- Methylhistidine As the Proximal Ligand, 1.6 Angstrom Resolution

Protein crystallography data

The structure of Heme-Carbene Complex in Myoglobin H64V/V68A Containing An N- Methylhistidine As the Proximal Ligand, 1.6 Angstrom Resolution, PDB code: 6g5b was solved by M.Tinzl, T.Hayashi, T.Mori, D.Hilvert, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.79 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 39.873, 47.981, 77.426, 90.00, 90.00, 90.00
R / Rfree (%) 17.4 / 21.5

Iron Binding Sites:

The binding sites of Iron atom in the Heme-Carbene Complex in Myoglobin H64V/V68A Containing An N- Methylhistidine As the Proximal Ligand, 1.6 Angstrom Resolution (pdb code 6g5b). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Heme-Carbene Complex in Myoglobin H64V/V68A Containing An N- Methylhistidine As the Proximal Ligand, 1.6 Angstrom Resolution, PDB code: 6g5b:

Iron binding site 1 out of 1 in 6g5b

Go back to Iron Binding Sites List in 6g5b
Iron binding site 1 out of 1 in the Heme-Carbene Complex in Myoglobin H64V/V68A Containing An N- Methylhistidine As the Proximal Ligand, 1.6 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Heme-Carbene Complex in Myoglobin H64V/V68A Containing An N- Methylhistidine As the Proximal Ligand, 1.6 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1201

b:17.6
occ:1.00
FE A:HEM1201 0.0 17.6 1.0
C2 A:EEE1202 1.9 21.3 1.0
ND A:HEM1201 2.0 20.6 1.0
NA A:HEM1201 2.0 17.3 1.0
NC A:HEM1201 2.0 14.6 1.0
NB A:HEM1201 2.1 18.2 1.0
NE2 A:MHS1093 2.3 16.2 1.0
C4D A:HEM1201 3.0 22.9 1.0
C1A A:HEM1201 3.0 21.0 1.0
C1D A:HEM1201 3.0 17.2 1.0
C1B A:HEM1201 3.1 15.5 1.0
C4A A:HEM1201 3.1 16.9 1.0
C4C A:HEM1201 3.1 14.4 1.0
CE1 A:MHS1093 3.1 15.4 1.0
C1 A:EEE1202 3.1 22.7 1.0
C4B A:HEM1201 3.1 15.7 1.0
C1C A:HEM1201 3.1 16.8 1.0
CD2 A:MHS1093 3.3 19.4 1.0
CHA A:HEM1201 3.4 18.6 1.0
CHB A:HEM1201 3.4 16.3 1.0
CHD A:HEM1201 3.4 19.0 1.0
O2 A:EEE1202 3.5 23.9 1.0
CHC A:HEM1201 3.5 14.9 1.0
O1 A:EEE1202 4.1 21.5 1.0
ND1 A:MHS1093 4.2 14.5 1.0
C3D A:HEM1201 4.2 25.9 1.0
C2A A:HEM1201 4.2 21.6 1.0
C2D A:HEM1201 4.2 21.3 1.0
C3A A:HEM1201 4.3 22.6 1.0
C2B A:HEM1201 4.3 12.2 1.0
C3B A:HEM1201 4.3 16.7 1.0
C3C A:HEM1201 4.3 16.6 1.0
C2C A:HEM1201 4.3 16.4 1.0
CG A:MHS1093 4.4 20.0 1.0
O A:HOH1421 4.7 37.6 1.0
C3 A:EEE1202 4.9 23.4 1.0
CD1 A:LEU1089 5.0 20.6 1.0

Reference:

T.Hayashi, M.Tinzl, T.Mori, U.Krengel, J.Proppe, J.Soetbeer, D.Klose, G.Jeschke, M.Reiher, D.Hilvert. Capture and Characterization of A Reactive Haem-Carbenoid Complex in An Artificial Metalloenzyme Nat Catal V. 1 2018.
ISSN: ISSN 2520-1158
DOI: 10.1038/S41929-018-0105-6
Page generated: Tue Aug 6 18:53:35 2024

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