Iron in PDB 6gmf: Structure of Cytochrome P450 CYP109Q5 From Chondromyces Apiculatus

The structure of Structure of Cytochrome P450 CYP109Q5 From Chondromyces Apiculatus, PDB code: 6gmf was solved by G.Grogan, P.Dubiel, M.Sharma, J.Klenk, B.Hauer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.71 / 1.55
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	44.690, 55.020, 74.800, 90.00, 91.67, 90.00
R / Rfree (%)	18.5 / 22

The binding sites of Iron atom in the Structure of Cytochrome P450 CYP109Q5 From Chondromyces Apiculatus (pdb code 6gmf). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of Cytochrome P450 CYP109Q5 From Chondromyces Apiculatus, PDB code: 6gmf:

Iron binding site 1 out of 1 in the Structure of Cytochrome P450 CYP109Q5 From Chondromyces Apiculatus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Cytochrome P450 CYP109Q5 From Chondromyces Apiculatus within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe501 b:15.7 occ:1.00 FE A:HEM501 0.0 15.7 1.0 ND A:HEM501 1.9 14.5 1.0 NA A:HEM501 2.0 15.5 1.0 NB A:HEM501 2.0 13.7 1.0 NC A:HEM501 2.1 15.3 1.0 O A:HOH673 2.2 21.0 1.0 SG A:CYS343 2.3 16.1 1.0 C4D A:HEM501 2.9 14.9 1.0 C1D A:HEM501 3.0 15.4 1.0 C4B A:HEM501 3.0 13.8 1.0 C1B A:HEM501 3.0 14.2 1.0 C1A A:HEM501 3.0 14.1 1.0 C4A A:HEM501 3.1 13.7 1.0 C1C A:HEM501 3.1 13.4 1.0 C4C A:HEM501 3.1 14.4 1.0 CB A:CYS343 3.3 14.6 1.0 CHC A:HEM501 3.3 14.5 1.0 CHA A:HEM501 3.4 15.5 1.0 CHB A:HEM501 3.4 13.8 1.0 CHD A:HEM501 3.4 13.8 1.0 CA A:CYS343 4.0 14.6 1.0 O A:ALA233 4.2 19.6 1.0 C2B A:HEM501 4.2 13.5 1.0 C3D A:HEM501 4.2 15.8 1.0 C2D A:HEM501 4.2 15.6 1.0 C3B A:HEM501 4.2 14.3 1.0 C3A A:HEM501 4.3 13.5 1.0 C2A A:HEM501 4.3 14.4 1.0 C3C A:HEM501 4.3 14.8 1.0 C2C A:HEM501 4.3 14.4 1.0 CB A:ALA233 4.7 16.1 1.0 N A:GLY345 4.7 17.0 1.0 C A:CYS343 4.7 15.1 1.0 N A:ILE344 4.8 17.3 1.0 C A:ALA233 4.9 17.8 1.0

J.M.Klenk, P.Dubiel, M.Sharma, G.Grogan, B.Hauer. Characterization and Structure-Guided Engineering of the Novel Versatile Terpene Monooxygenase CYP109Q5 From Chondromyces Apiculatus DSM436. Microb Biotechnol V. 12 377 2019.
ISSN: ISSN 1751-7915
PubMed: 30592153
DOI: 10.1111/1751-7915.13354