Iron in PDB 6hit: The Crystal Structure of Haemoglobin From Atlantic Cod
Protein crystallography data
The structure of The Crystal Structure of Haemoglobin From Atlantic Cod, PDB code: 6hit
was solved by
R.Helland,
E.K.Bjorkeng,
U.Rothweiler,
M.O.Sydnes,
D.M.Pampanin,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
50.00 /
2.50
|
|
Space group
|
P 21 21 21
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
62.691,
103.257,
199.352,
90.00,
90.00,
90.00
|
|
R / Rfree (%)
|
23.2 /
30.1
|
Iron Binding Sites:
The binding sites of Iron atom in the The Crystal Structure of Haemoglobin From Atlantic Cod
(pdb code 6hit). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the
The Crystal Structure of Haemoglobin From Atlantic Cod, PDB code: 6hit:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Iron binding site 1 out
of 8 in 6hit
Go back to
Iron Binding Sites List in 6hit
Iron binding site 1 out
of 8 in the The Crystal Structure of Haemoglobin From Atlantic Cod
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of The Crystal Structure of Haemoglobin From Atlantic Cod within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe201
b:38.4
occ:1.00
|
FE
|
A:HEM201
|
0.0
|
38.4
|
1.0
|
|
ND
|
A:HEM201
|
1.9
|
39.5
|
1.0
|
|
NA
|
A:HEM201
|
2.0
|
37.0
|
1.0
|
|
NC
|
A:HEM201
|
2.1
|
37.8
|
1.0
|
|
NB
|
A:HEM201
|
2.1
|
37.4
|
1.0
|
|
NE2
|
A:HIS89
|
2.3
|
34.8
|
1.0
|
|
C1D
|
A:HEM201
|
2.9
|
36.1
|
1.0
|
|
C4D
|
A:HEM201
|
2.9
|
37.2
|
1.0
|
|
C1A
|
A:HEM201
|
3.0
|
37.8
|
1.0
|
|
C4A
|
A:HEM201
|
3.0
|
38.4
|
1.0
|
|
C4B
|
A:HEM201
|
3.0
|
35.6
|
1.0
|
|
C4C
|
A:HEM201
|
3.1
|
39.1
|
1.0
|
|
C1B
|
A:HEM201
|
3.1
|
36.1
|
1.0
|
|
C1C
|
A:HEM201
|
3.1
|
38.7
|
1.0
|
|
CD2
|
A:HIS89
|
3.1
|
36.6
|
1.0
|
|
CE1
|
A:HIS89
|
3.3
|
37.8
|
1.0
|
|
CHD
|
A:HEM201
|
3.4
|
36.9
|
1.0
|
|
CHA
|
A:HEM201
|
3.4
|
38.6
|
1.0
|
|
CHB
|
A:HEM201
|
3.4
|
36.7
|
1.0
|
|
CHC
|
A:HEM201
|
3.4
|
36.3
|
1.0
|
|
C3A
|
A:HEM201
|
4.2
|
37.6
|
1.0
|
|
C2A
|
A:HEM201
|
4.2
|
41.2
|
1.0
|
|
C2D
|
A:HEM201
|
4.2
|
37.9
|
1.0
|
|
NE2
|
A:HIS60
|
4.2
|
44.8
|
1.0
|
|
C3D
|
A:HEM201
|
4.2
|
38.5
|
1.0
|
|
C3C
|
A:HEM201
|
4.3
|
40.8
|
1.0
|
|
C2C
|
A:HEM201
|
4.3
|
40.7
|
1.0
|
|
C2B
|
A:HEM201
|
4.3
|
36.3
|
1.0
|
|
C3B
|
A:HEM201
|
4.3
|
37.0
|
1.0
|
|
CG
|
A:HIS89
|
4.3
|
35.6
|
1.0
|
|
ND1
|
A:HIS89
|
4.4
|
33.8
|
1.0
|
|
CE1
|
A:HIS60
|
4.5
|
49.9
|
1.0
|
|
CG1
|
A:ILE64
|
5.0
|
42.9
|
1.0
|
|
Iron binding site 2 out
of 8 in 6hit
Go back to
Iron Binding Sites List in 6hit
Iron binding site 2 out
of 8 in the The Crystal Structure of Haemoglobin From Atlantic Cod
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of The Crystal Structure of Haemoglobin From Atlantic Cod within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe201
b:65.3
occ:1.00
|
FE
|
B:HEM201
|
0.0
|
65.3
|
1.0
|
|
ND
|
B:HEM201
|
1.9
|
70.3
|
1.0
|
|
NA
|
B:HEM201
|
2.0
|
77.2
|
1.0
|
|
NC
|
B:HEM201
|
2.1
|
73.4
|
1.0
|
|
NB
|
B:HEM201
|
2.1
|
64.7
|
1.0
|
|
NE2
|
B:HIS93
|
2.2
|
72.6
|
1.0
|
|
C1D
|
B:HEM201
|
2.9
|
74.8
|
1.0
|
|
C4D
|
B:HEM201
|
2.9
|
71.3
|
1.0
|
|
C1A
|
B:HEM201
|
3.0
|
75.0
|
1.0
|
|
C4B
|
B:HEM201
|
3.0
|
64.4
|
1.0
|
|
C4A
|
B:HEM201
|
3.1
|
77.0
|
1.0
|
|
C1B
|
B:HEM201
|
3.1
|
63.1
|
1.0
|
|
C4C
|
B:HEM201
|
3.1
|
70.3
|
1.0
|
|
C1C
|
B:HEM201
|
3.1
|
67.9
|
1.0
|
|
CE1
|
B:HIS93
|
3.1
|
76.9
|
1.0
|
|
CD2
|
B:HIS93
|
3.2
|
77.8
|
1.0
|
|
CHD
|
B:HEM201
|
3.4
|
71.8
|
1.0
|
|
CHA
|
B:HEM201
|
3.4
|
74.0
|
1.0
|
|
CHB
|
B:HEM201
|
3.4
|
68.7
|
1.0
|
|
CHC
|
B:HEM201
|
3.4
|
65.4
|
1.0
|
|
NE2
|
B:HIS64
|
4.1
|
77.0
|
1.0
|
|
C2D
|
B:HEM201
|
4.2
|
74.1
|
1.0
|
|
C3D
|
B:HEM201
|
4.2
|
74.5
|
1.0
|
|
C2A
|
B:HEM201
|
4.2
|
81.8
|
1.0
|
|
ND1
|
B:HIS93
|
4.3
|
75.4
|
1.0
|
|
C3A
|
B:HEM201
|
4.3
|
81.7
|
1.0
|
|
C2B
|
B:HEM201
|
4.3
|
63.9
|
1.0
|
|
C2C
|
B:HEM201
|
4.3
|
69.7
|
1.0
|
|
C3C
|
B:HEM201
|
4.3
|
74.0
|
1.0
|
|
C3B
|
B:HEM201
|
4.3
|
66.2
|
1.0
|
|
CG
|
B:HIS93
|
4.3
|
69.8
|
1.0
|
|
CE1
|
B:HIS64
|
4.6
|
77.4
|
1.0
|
|
CG1
|
B:ILE68
|
4.7
|
60.8
|
1.0
|
|
Iron binding site 3 out
of 8 in 6hit
Go back to
Iron Binding Sites List in 6hit
Iron binding site 3 out
of 8 in the The Crystal Structure of Haemoglobin From Atlantic Cod
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of The Crystal Structure of Haemoglobin From Atlantic Cod within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe201
b:36.6
occ:1.00
|
FE
|
C:HEM201
|
0.0
|
36.6
|
1.0
|
|
ND
|
C:HEM201
|
1.9
|
35.6
|
1.0
|
|
NA
|
C:HEM201
|
2.0
|
35.2
|
1.0
|
|
NB
|
C:HEM201
|
2.1
|
33.4
|
1.0
|
|
NC
|
C:HEM201
|
2.1
|
34.6
|
1.0
|
|
NE2
|
C:HIS89
|
2.2
|
31.5
|
1.0
|
|
C1D
|
C:HEM201
|
2.9
|
32.4
|
1.0
|
|
C4D
|
C:HEM201
|
2.9
|
36.0
|
1.0
|
|
C4A
|
C:HEM201
|
3.0
|
34.6
|
1.0
|
|
C1A
|
C:HEM201
|
3.0
|
36.2
|
1.0
|
|
C1B
|
C:HEM201
|
3.0
|
34.0
|
1.0
|
|
C4C
|
C:HEM201
|
3.0
|
34.7
|
1.0
|
|
C4B
|
C:HEM201
|
3.1
|
37.1
|
1.0
|
|
C1C
|
C:HEM201
|
3.1
|
34.3
|
1.0
|
|
CE1
|
C:HIS89
|
3.1
|
30.5
|
1.0
|
|
CD2
|
C:HIS89
|
3.2
|
33.4
|
1.0
|
|
CHD
|
C:HEM201
|
3.4
|
33.9
|
1.0
|
|
CHB
|
C:HEM201
|
3.4
|
33.6
|
1.0
|
|
CHA
|
C:HEM201
|
3.4
|
35.1
|
1.0
|
|
CHC
|
C:HEM201
|
3.5
|
34.1
|
1.0
|
|
C2D
|
C:HEM201
|
4.2
|
33.3
|
1.0
|
|
C3D
|
C:HEM201
|
4.2
|
36.3
|
1.0
|
|
C3A
|
C:HEM201
|
4.2
|
37.2
|
1.0
|
|
C2A
|
C:HEM201
|
4.2
|
40.6
|
1.0
|
|
ND1
|
C:HIS89
|
4.2
|
29.2
|
1.0
|
|
C3C
|
C:HEM201
|
4.3
|
34.8
|
1.0
|
|
C2B
|
C:HEM201
|
4.3
|
35.8
|
1.0
|
|
CG
|
C:HIS89
|
4.3
|
30.1
|
1.0
|
|
C2C
|
C:HEM201
|
4.3
|
33.5
|
1.0
|
|
NE2
|
C:HIS60
|
4.3
|
41.5
|
1.0
|
|
C3B
|
C:HEM201
|
4.3
|
37.4
|
1.0
|
|
CD1
|
C:ILE64
|
4.4
|
35.2
|
1.0
|
|
CG1
|
C:ILE64
|
4.5
|
33.5
|
1.0
|
|
Iron binding site 4 out
of 8 in 6hit
Go back to
Iron Binding Sites List in 6hit
Iron binding site 4 out
of 8 in the The Crystal Structure of Haemoglobin From Atlantic Cod
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of The Crystal Structure of Haemoglobin From Atlantic Cod within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe201
b:41.8
occ:1.00
|
FE
|
D:HEM201
|
0.0
|
41.8
|
1.0
|
|
ND
|
D:HEM201
|
1.9
|
46.4
|
1.0
|
|
NA
|
D:HEM201
|
2.0
|
45.3
|
1.0
|
|
NE2
|
D:HIS93
|
2.1
|
44.8
|
1.0
|
|
NB
|
D:HEM201
|
2.1
|
41.8
|
1.0
|
|
NC
|
D:HEM201
|
2.1
|
47.3
|
1.0
|
|
CE1
|
D:HIS93
|
2.9
|
46.2
|
1.0
|
|
C4D
|
D:HEM201
|
2.9
|
46.6
|
1.0
|
|
C1D
|
D:HEM201
|
2.9
|
48.4
|
1.0
|
|
C4B
|
D:HEM201
|
3.0
|
43.6
|
1.0
|
|
C1A
|
D:HEM201
|
3.0
|
38.4
|
1.0
|
|
CD1
|
D:ILE68
|
3.0
|
65.8
|
1.0
|
|
C1C
|
D:HEM201
|
3.1
|
43.5
|
1.0
|
|
C4A
|
D:HEM201
|
3.1
|
44.4
|
1.0
|
|
C4C
|
D:HEM201
|
3.1
|
48.3
|
1.0
|
|
C1B
|
D:HEM201
|
3.1
|
44.8
|
1.0
|
|
CD2
|
D:HIS93
|
3.2
|
42.6
|
1.0
|
|
CHC
|
D:HEM201
|
3.4
|
44.8
|
1.0
|
|
CHA
|
D:HEM201
|
3.4
|
39.4
|
1.0
|
|
CHD
|
D:HEM201
|
3.4
|
49.2
|
1.0
|
|
CHB
|
D:HEM201
|
3.5
|
43.4
|
1.0
|
|
CG1
|
D:ILE68
|
3.6
|
72.2
|
1.0
|
|
ND1
|
D:HIS93
|
4.1
|
46.6
|
1.0
|
|
NE2
|
D:HIS64
|
4.1
|
47.8
|
1.0
|
|
C3D
|
D:HEM201
|
4.2
|
50.3
|
1.0
|
|
C2D
|
D:HEM201
|
4.2
|
52.6
|
1.0
|
|
C2A
|
D:HEM201
|
4.2
|
44.7
|
1.0
|
|
C2C
|
D:HEM201
|
4.2
|
45.3
|
1.0
|
|
CG
|
D:HIS93
|
4.3
|
44.1
|
1.0
|
|
C3A
|
D:HEM201
|
4.3
|
40.3
|
1.0
|
|
C3C
|
D:HEM201
|
4.3
|
47.4
|
1.0
|
|
C3B
|
D:HEM201
|
4.3
|
45.2
|
1.0
|
|
C2B
|
D:HEM201
|
4.3
|
46.3
|
1.0
|
|
CE1
|
D:HIS64
|
4.8
|
54.4
|
1.0
|
|
CB
|
D:ILE68
|
5.0
|
60.1
|
1.0
|
|
Iron binding site 5 out
of 8 in 6hit
Go back to
Iron Binding Sites List in 6hit
Iron binding site 5 out
of 8 in the The Crystal Structure of Haemoglobin From Atlantic Cod
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of The Crystal Structure of Haemoglobin From Atlantic Cod within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe201
b:71.1
occ:1.00
|
FE
|
E:HEM201
|
0.0
|
71.1
|
1.0
|
|
ND
|
E:HEM201
|
1.9
|
84.4
|
1.0
|
|
NA
|
E:HEM201
|
2.0
|
88.0
|
1.0
|
|
NE2
|
E:HIS89
|
2.1
|
57.0
|
1.0
|
|
NC
|
E:HEM201
|
2.1
|
73.9
|
1.0
|
|
NB
|
E:HEM201
|
2.1
|
79.8
|
1.0
|
|
C4D
|
E:HEM201
|
2.9
|
80.5
|
1.0
|
|
C1D
|
E:HEM201
|
2.9
|
80.6
|
1.0
|
|
C1A
|
E:HEM201
|
3.0
|
85.3
|
1.0
|
|
CE1
|
E:HIS89
|
3.0
|
59.5
|
1.0
|
|
C4B
|
E:HEM201
|
3.0
|
73.8
|
1.0
|
|
C4A
|
E:HEM201
|
3.1
|
94.8
|
1.0
|
|
C4C
|
E:HEM201
|
3.1
|
69.6
|
1.0
|
|
C1B
|
E:HEM201
|
3.1
|
82.5
|
1.0
|
|
CD2
|
E:HIS89
|
3.1
|
57.2
|
1.0
|
|
C1C
|
E:HEM201
|
3.1
|
72.1
|
1.0
|
|
CHA
|
E:HEM201
|
3.4
|
82.1
|
1.0
|
|
CHD
|
E:HEM201
|
3.4
|
75.1
|
1.0
|
|
CHC
|
E:HEM201
|
3.4
|
68.2
|
1.0
|
|
CHB
|
E:HEM201
|
3.5
|
88.9
|
1.0
|
|
ND1
|
E:HIS89
|
4.2
|
57.3
|
1.0
|
|
C3D
|
E:HEM201
|
4.2
|
86.7
|
1.0
|
|
C2D
|
E:HEM201
|
4.2
|
83.6
|
1.0
|
|
CG
|
E:HIS89
|
4.2
|
57.0
|
1.0
|
|
C2A
|
E:HEM201
|
4.2
|
95.5
|
1.0
|
|
C3A
|
E:HEM201
|
4.2
|
96.1
|
1.0
|
|
C3C
|
E:HEM201
|
4.3
|
73.3
|
1.0
|
|
C2C
|
E:HEM201
|
4.3
|
73.3
|
1.0
|
|
C2B
|
E:HEM201
|
4.3
|
76.8
|
1.0
|
|
C3B
|
E:HEM201
|
4.3
|
72.8
|
1.0
|
|
NE2
|
E:HIS60
|
4.4
|
89.2
|
1.0
|
|
CE1
|
E:HIS60
|
4.8
|
87.2
|
1.0
|
|
CG1
|
E:ILE64
|
4.8
|
85.7
|
1.0
|
|
Iron binding site 6 out
of 8 in 6hit
Go back to
Iron Binding Sites List in 6hit
Iron binding site 6 out
of 8 in the The Crystal Structure of Haemoglobin From Atlantic Cod
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of The Crystal Structure of Haemoglobin From Atlantic Cod within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe201
b:49.4
occ:1.00
|
FE
|
F:HEM201
|
0.0
|
49.4
|
1.0
|
|
ND
|
F:HEM201
|
1.9
|
52.6
|
1.0
|
|
NA
|
F:HEM201
|
2.0
|
49.0
|
1.0
|
|
NC
|
F:HEM201
|
2.1
|
48.6
|
1.0
|
|
NB
|
F:HEM201
|
2.1
|
51.1
|
1.0
|
|
NE2
|
F:HIS93
|
2.2
|
61.6
|
1.0
|
|
C4D
|
F:HEM201
|
2.9
|
50.6
|
1.0
|
|
C1D
|
F:HEM201
|
2.9
|
49.9
|
1.0
|
|
C1A
|
F:HEM201
|
3.0
|
52.7
|
1.0
|
|
C4A
|
F:HEM201
|
3.0
|
48.2
|
1.0
|
|
C4C
|
F:HEM201
|
3.0
|
49.0
|
1.0
|
|
C4B
|
F:HEM201
|
3.0
|
51.6
|
1.0
|
|
C1C
|
F:HEM201
|
3.1
|
55.6
|
1.0
|
|
C1B
|
F:HEM201
|
3.1
|
48.6
|
1.0
|
|
CE1
|
F:HIS93
|
3.2
|
62.2
|
1.0
|
|
CD2
|
F:HIS93
|
3.2
|
67.1
|
1.0
|
|
CHA
|
F:HEM201
|
3.4
|
51.7
|
1.0
|
|
CHD
|
F:HEM201
|
3.4
|
49.8
|
1.0
|
|
CHB
|
F:HEM201
|
3.4
|
50.1
|
1.0
|
|
CHC
|
F:HEM201
|
3.4
|
54.4
|
1.0
|
|
NE2
|
F:HIS64
|
4.0
|
50.6
|
1.0
|
|
C3D
|
F:HEM201
|
4.2
|
53.2
|
1.0
|
|
C3A
|
F:HEM201
|
4.2
|
49.2
|
1.0
|
|
C2D
|
F:HEM201
|
4.2
|
50.5
|
1.0
|
|
C2A
|
F:HEM201
|
4.2
|
52.4
|
1.0
|
|
C3C
|
F:HEM201
|
4.2
|
53.2
|
1.0
|
|
C2C
|
F:HEM201
|
4.2
|
57.2
|
1.0
|
|
C2B
|
F:HEM201
|
4.3
|
48.1
|
1.0
|
|
C3B
|
F:HEM201
|
4.3
|
49.4
|
1.0
|
|
ND1
|
F:HIS93
|
4.3
|
63.3
|
1.0
|
|
CG
|
F:HIS93
|
4.4
|
68.6
|
1.0
|
|
CE1
|
F:HIS64
|
4.5
|
52.7
|
1.0
|
|
CG1
|
F:ILE68
|
4.7
|
38.9
|
1.0
|
|
Iron binding site 7 out
of 8 in 6hit
Go back to
Iron Binding Sites List in 6hit
Iron binding site 7 out
of 8 in the The Crystal Structure of Haemoglobin From Atlantic Cod
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of The Crystal Structure of Haemoglobin From Atlantic Cod within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Fe201
b:55.9
occ:1.00
|
FE
|
G:HEM201
|
0.0
|
55.9
|
1.0
|
|
ND
|
G:HEM201
|
1.9
|
55.3
|
1.0
|
|
NA
|
G:HEM201
|
2.0
|
58.8
|
1.0
|
|
NC
|
G:HEM201
|
2.1
|
53.4
|
1.0
|
|
NB
|
G:HEM201
|
2.1
|
56.6
|
1.0
|
|
NE2
|
G:HIS89
|
2.1
|
58.8
|
1.0
|
|
C4D
|
G:HEM201
|
2.9
|
57.5
|
1.0
|
|
C1D
|
G:HEM201
|
2.9
|
55.0
|
1.0
|
|
C1A
|
G:HEM201
|
3.0
|
55.3
|
1.0
|
|
C4B
|
G:HEM201
|
3.0
|
60.8
|
1.0
|
|
C4A
|
G:HEM201
|
3.1
|
56.0
|
1.0
|
|
C4C
|
G:HEM201
|
3.1
|
51.2
|
1.0
|
|
C1B
|
G:HEM201
|
3.1
|
57.1
|
1.0
|
|
C1C
|
G:HEM201
|
3.1
|
52.8
|
1.0
|
|
CE1
|
G:HIS89
|
3.1
|
56.0
|
1.0
|
|
CD2
|
G:HIS89
|
3.2
|
59.0
|
1.0
|
|
CHA
|
G:HEM201
|
3.4
|
55.0
|
1.0
|
|
CHD
|
G:HEM201
|
3.4
|
52.8
|
1.0
|
|
CHC
|
G:HEM201
|
3.4
|
55.9
|
1.0
|
|
CHB
|
G:HEM201
|
3.5
|
56.3
|
1.0
|
|
NE2
|
G:HIS60
|
4.0
|
70.8
|
1.0
|
|
C2D
|
G:HEM201
|
4.2
|
58.0
|
1.0
|
|
C3D
|
G:HEM201
|
4.2
|
58.3
|
1.0
|
|
C2A
|
G:HEM201
|
4.2
|
58.0
|
1.0
|
|
ND1
|
G:HIS89
|
4.2
|
53.7
|
1.0
|
|
C3A
|
G:HEM201
|
4.2
|
53.5
|
1.0
|
|
C2C
|
G:HEM201
|
4.3
|
53.0
|
1.0
|
|
C3C
|
G:HEM201
|
4.3
|
49.9
|
1.0
|
|
CG
|
G:HIS89
|
4.3
|
53.9
|
1.0
|
|
C2B
|
G:HEM201
|
4.3
|
57.3
|
1.0
|
|
C3B
|
G:HEM201
|
4.3
|
60.2
|
1.0
|
|
CG1
|
G:ILE64
|
4.6
|
62.6
|
1.0
|
|
CE1
|
G:HIS60
|
4.7
|
75.1
|
1.0
|
|
CD1
|
G:ILE64
|
4.9
|
66.1
|
1.0
|
|
Iron binding site 8 out
of 8 in 6hit
Go back to
Iron Binding Sites List in 6hit
Iron binding site 8 out
of 8 in the The Crystal Structure of Haemoglobin From Atlantic Cod
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of The Crystal Structure of Haemoglobin From Atlantic Cod within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Fe201
b:65.7
occ:1.00
|
FE
|
H:HEM201
|
0.0
|
65.7
|
1.0
|
|
ND
|
H:HEM201
|
1.9
|
60.2
|
1.0
|
|
NA
|
H:HEM201
|
2.0
|
63.1
|
1.0
|
|
NC
|
H:HEM201
|
2.1
|
61.5
|
1.0
|
|
NB
|
H:HEM201
|
2.1
|
55.3
|
1.0
|
|
NE2
|
H:HIS93
|
2.4
|
99.9
|
1.0
|
|
C1D
|
H:HEM201
|
2.9
|
61.9
|
1.0
|
|
C4D
|
H:HEM201
|
2.9
|
66.4
|
1.0
|
|
C1A
|
H:HEM201
|
3.0
|
66.5
|
1.0
|
|
C4A
|
H:HEM201
|
3.0
|
64.6
|
1.0
|
|
C4B
|
H:HEM201
|
3.0
|
55.7
|
1.0
|
|
C1B
|
H:HEM201
|
3.0
|
57.2
|
1.0
|
|
C4C
|
H:HEM201
|
3.1
|
60.5
|
1.0
|
|
C1C
|
H:HEM201
|
3.1
|
55.7
|
1.0
|
|
CD2
|
H:HIS93
|
3.3
|
96.3
|
1.0
|
|
CHA
|
H:HEM201
|
3.4
|
68.3
|
1.0
|
|
CHD
|
H:HEM201
|
3.4
|
64.0
|
1.0
|
|
CHB
|
H:HEM201
|
3.4
|
66.0
|
1.0
|
|
CE1
|
H:HIS93
|
3.4
|
94.9
|
1.0
|
|
CHC
|
H:HEM201
|
3.4
|
53.3
|
1.0
|
|
NE2
|
H:HIS64
|
4.1
|
87.9
|
1.0
|
|
C2D
|
H:HEM201
|
4.2
|
64.1
|
1.0
|
|
C3A
|
H:HEM201
|
4.2
|
66.1
|
1.0
|
|
C2A
|
H:HEM201
|
4.2
|
73.7
|
1.0
|
|
C3D
|
H:HEM201
|
4.2
|
67.2
|
1.0
|
|
C2B
|
H:HEM201
|
4.3
|
57.0
|
1.0
|
|
C2C
|
H:HEM201
|
4.3
|
54.4
|
1.0
|
|
C3C
|
H:HEM201
|
4.3
|
52.9
|
1.0
|
|
C3B
|
H:HEM201
|
4.3
|
58.7
|
1.0
|
|
ND1
|
H:HIS93
|
4.5
|
91.0
|
1.0
|
|
CG
|
H:HIS93
|
4.5
|
92.8
|
1.0
|
|
CE1
|
H:HIS64
|
4.7
|
91.1
|
1.0
|
|
CB
|
H:ILE68
|
5.0
|
78.0
|
1.0
|
|
Reference:
R.Helland,
E.K.Bjorkeng,
U.Rothweiler,
M.O.Sydnes,
D.M.Pampanin.
The Crystal Structure of Haemoglobin From Atlantic Cod. Acta Crystallogr.,Sect.F V. 75 537 2019.
ISSN: ESSN 2053-230X
PubMed: 31397324
DOI: 10.1107/S2053230X1900904X
Page generated: Sun Dec 13 16:28:32 2020
|
