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Iron in PDB 6hiu: Cytochrome P460 From Methylococcus Capsulatus (Bath)

Protein crystallography data

The structure of Cytochrome P460 From Methylococcus Capsulatus (Bath), PDB code: 6hiu was solved by H.Adams, T.M.Chicano, M.A.Hough, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.67 / 1.36
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 46.623, 81.647, 85.264, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 22.4

Iron Binding Sites:

The binding sites of Iron atom in the Cytochrome P460 From Methylococcus Capsulatus (Bath) (pdb code 6hiu). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Cytochrome P460 From Methylococcus Capsulatus (Bath), PDB code: 6hiu:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 6hiu

Go back to Iron Binding Sites List in 6hiu
Iron binding site 1 out of 2 in the Cytochrome P460 From Methylococcus Capsulatus (Bath)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome P460 From Methylococcus Capsulatus (Bath) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:16.3
occ:1.00
FE B:HEC201 0.0 16.3 1.0
NB B:HEC201 2.0 16.4 1.0
NC B:HEC201 2.0 15.8 1.0
ND B:HEC201 2.1 18.8 1.0
NA B:HEC201 2.1 15.7 1.0
NE2 B:HIS144 2.1 15.8 1.0
O B:HOH318 2.4 23.7 1.0
C1C B:HEC201 3.1 17.4 1.0
C1B B:HEC201 3.1 15.8 1.0
C1A B:HEC201 3.1 17.0 1.0
C1D B:HEC201 3.1 17.9 1.0
C4C B:HEC201 3.1 16.2 1.0
C4B B:HEC201 3.1 16.0 1.0
CE1 B:HIS144 3.1 15.4 1.0
C4A B:HEC201 3.1 15.1 1.0
C4D B:HEC201 3.2 18.0 1.0
CD2 B:HIS144 3.2 16.2 1.0
CHD B:HEC201 3.4 16.5 1.0
CHC B:HEC201 3.4 16.2 1.0
CHB B:HEC201 3.4 15.7 1.0
CHA B:HEC201 3.5 19.0 1.0
O2 B:GOL202 4.2 27.5 0.5
ND1 B:HIS144 4.2 15.7 1.0
C2A B:HEC201 4.3 17.6 1.0
NZ B:LYS78 4.3 26.3 0.6
C2B B:HEC201 4.3 15.7 1.0
C3A B:HEC201 4.3 16.8 1.0
CG B:HIS144 4.3 15.8 1.0
C2C B:HEC201 4.3 16.9 1.0
C2D B:HEC201 4.3 17.8 1.0
C3B B:HEC201 4.3 16.1 1.0
C3C B:HEC201 4.3 16.9 1.0
C3D B:HEC201 4.4 18.3 1.0
OD2 B:ASP102 4.7 16.2 0.4
NZ B:LYS78 4.8 15.9 0.4
C3 B:GOL202 4.8 31.0 0.5

Iron binding site 2 out of 2 in 6hiu

Go back to Iron Binding Sites List in 6hiu
Iron binding site 2 out of 2 in the Cytochrome P460 From Methylococcus Capsulatus (Bath)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cytochrome P460 From Methylococcus Capsulatus (Bath) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:14.4
occ:1.00
FE A:HEC201 0.0 14.4 1.0
NB A:HEC201 2.0 14.0 1.0
ND A:HEC201 2.0 14.6 1.0
NC A:HEC201 2.1 15.8 1.0
NA A:HEC201 2.1 14.6 1.0
NE2 A:HIS144 2.1 15.1 1.0
O A:HOH377 2.3 23.6 1.0
C1D A:HEC201 3.1 15.5 1.0
CE1 A:HIS144 3.1 14.4 1.0
C4C A:HEC201 3.1 15.3 1.0
C4B A:HEC201 3.1 15.5 1.0
C4A A:HEC201 3.1 13.8 1.0
C1B A:HEC201 3.1 14.0 1.0
C1A A:HEC201 3.1 14.9 1.0
C4D A:HEC201 3.1 15.4 1.0
C1C A:HEC201 3.1 16.2 1.0
CD2 A:HIS144 3.2 13.7 1.0
CHD A:HEC201 3.4 17.4 1.0
CHC A:HEC201 3.4 14.7 1.0
CHB A:HEC201 3.5 14.3 1.0
CHA A:HEC201 3.5 16.6 1.0
ND1 A:HIS144 4.2 13.7 1.0
C2B A:HEC201 4.3 15.1 1.0
C3A A:HEC201 4.3 14.6 1.0
C3B A:HEC201 4.3 15.9 1.0
C2D A:HEC201 4.3 17.1 1.0
CG A:HIS144 4.3 14.6 1.0
C2A A:HEC201 4.3 15.5 1.0
C3C A:HEC201 4.3 16.5 1.0
C2C A:HEC201 4.3 16.8 1.0
C3D A:HEC201 4.4 14.8 1.0
NZ A:LYS78 4.7 20.2 0.6
NZ A:LYS78 4.8 18.5 0.4
OD2 A:ASP102 4.8 17.0 0.5

Reference:

H.R.Adams, C.Krewson, J.E.Vardanega, S.Fujii, T.Moreno, Y.Sambongi, D.Svistunenko, J.Paps, C.R.Andrew, M.A.Hough. One Fold, Two Functions: Cytochrome P460 and Cytochromec'-Beta From the Methanotrophmethylococcus Capsulatus(Bath). Chem Sci V. 10 3031 2019.
ISSN: ISSN 2041-6520
PubMed: 30996884
DOI: 10.1039/C8SC05210G
Page generated: Tue Aug 6 21:22:44 2024

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