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Iron in PDB 6ipp: Non-Native Ferritin 8-Mer Mutant-C90A/C102A/C130A/D144C

Enzymatic activity of Non-Native Ferritin 8-Mer Mutant-C90A/C102A/C130A/D144C

All present enzymatic activity of Non-Native Ferritin 8-Mer Mutant-C90A/C102A/C130A/D144C:
1.16.3.1;

Protein crystallography data

The structure of Non-Native Ferritin 8-Mer Mutant-C90A/C102A/C130A/D144C, PDB code: 6ipp was solved by J.Zang, H.Chen, K.Zhou, G.Zhao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.05 / 2.70
Space group F 4 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 235.374, 235.374, 235.374, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 23.2

Iron Binding Sites:

The binding sites of Iron atom in the Non-Native Ferritin 8-Mer Mutant-C90A/C102A/C130A/D144C (pdb code 6ipp). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Non-Native Ferritin 8-Mer Mutant-C90A/C102A/C130A/D144C, PDB code: 6ipp:

Iron binding site 1 out of 1 in 6ipp

Go back to Iron Binding Sites List in 6ipp
Iron binding site 1 out of 1 in the Non-Native Ferritin 8-Mer Mutant-C90A/C102A/C130A/D144C


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Non-Native Ferritin 8-Mer Mutant-C90A/C102A/C130A/D144C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:28.1
occ:1.00
OE1 A:GLU27 2.0 31.6 1.0
OE1 A:GLU62 2.0 29.1 1.0
ND1 A:HIS65 2.3 29.4 1.0
O A:HOH330 2.4 34.8 1.0
CD A:GLU62 2.8 30.6 1.0
CD A:GLU27 3.0 30.5 1.0
OE2 A:GLU62 3.0 36.2 1.0
CE1 A:HIS65 3.1 34.2 1.0
OE2 A:GLU27 3.3 30.6 1.0
CG A:HIS65 3.4 31.0 1.0
CB A:HIS65 3.8 28.8 1.0
CG1 A:VAL110 4.2 20.9 1.0
CG A:GLU62 4.2 18.5 1.0
NE2 A:HIS65 4.3 38.1 1.0
CG A:GLU27 4.3 25.0 1.0
CD2 A:HIS65 4.4 34.9 1.0
CA A:GLU62 4.6 23.5 1.0
CB A:GLU62 4.6 20.0 1.0
OE2 A:GLU107 4.7 44.5 1.0
CB A:GLU27 4.8 23.0 1.0
OE1 A:GLU107 4.9 39.5 1.0

Reference:

J.Zang, H.Chen, X.Zhang, C.Zhang, J.Guo, M.Du, G.Zhao. Disulfide-Mediated Conversion of 8-Mer Bowl-Like Protein Architecture Into Three Different Nanocages. Nat Commun V. 10 778 2019.
ISSN: ESSN 2041-1723
PubMed: 30770832
DOI: 10.1038/S41467-019-08788-9
Page generated: Tue Aug 6 23:08:12 2024

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