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Iron in PDB 6jsa: Crystal Structure of the C-Terminal Domain of Htaa From Corynebacterium Glutamicum

Protein crystallography data

The structure of Crystal Structure of the C-Terminal Domain of Htaa From Corynebacterium Glutamicum, PDB code: 6jsa was solved by N.Muraki, S.Aono, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.03 / 1.30
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 60.280, 63.310, 88.230, 90.00, 90.00, 90.00
R / Rfree (%) 16 / 18

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the C-Terminal Domain of Htaa From Corynebacterium Glutamicum (pdb code 6jsa). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of the C-Terminal Domain of Htaa From Corynebacterium Glutamicum, PDB code: 6jsa:

Iron binding site 1 out of 1 in 6jsa

Go back to Iron Binding Sites List in 6jsa
Iron binding site 1 out of 1 in the Crystal Structure of the C-Terminal Domain of Htaa From Corynebacterium Glutamicum


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the C-Terminal Domain of Htaa From Corynebacterium Glutamicum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe300

b:10.5
occ:1.00
FE A:HEM300 0.0 10.5 1.0
ND A:HEM300 2.0 9.9 1.0
NC A:HEM300 2.0 9.8 1.0
NB A:HEM300 2.1 10.5 1.0
NA A:HEM300 2.1 9.5 1.0
OH A:TYR383 2.1 11.2 1.0
CZ A:TYR383 3.0 10.4 1.0
C4B A:HEM300 3.0 11.1 1.0
C1C A:HEM300 3.1 9.8 1.0
C1D A:HEM300 3.1 9.0 1.0
C4D A:HEM300 3.1 9.8 1.0
C1A A:HEM300 3.1 10.0 1.0
C1B A:HEM300 3.1 10.5 1.0
C4A A:HEM300 3.1 10.4 1.0
C4C A:HEM300 3.1 8.7 1.0
CHC A:HEM300 3.4 10.3 1.0
CHA A:HEM300 3.4 10.2 1.0
CHD A:HEM300 3.4 8.7 1.0
CHB A:HEM300 3.4 10.5 1.0
CZ A:PHE511 3.5 9.3 1.0
CE1 A:PHE511 3.6 8.9 1.0
CE2 A:TYR383 3.6 9.5 1.0
CE1 A:TYR383 3.8 10.3 1.0
NE2 A:HIS434 3.9 13.3 1.0
CE2 A:PHE511 3.9 8.9 1.0
CD1 A:PHE511 4.2 9.1 1.0
C3B A:HEM300 4.3 12.4 1.0
C2B A:HEM300 4.3 12.3 1.0
C2D A:HEM300 4.3 9.6 1.0
C3D A:HEM300 4.3 9.4 1.0
C2A A:HEM300 4.3 10.7 1.0
C2C A:HEM300 4.3 10.2 1.0
C3A A:HEM300 4.3 11.1 1.0
C3C A:HEM300 4.3 9.6 1.0
CD2 A:PHE511 4.4 9.2 1.0
CD2 A:HIS434 4.5 12.8 1.0
CG A:PHE511 4.5 8.6 1.0
CE1 A:HIS434 4.8 13.3 1.0
CD2 A:TYR383 4.8 9.1 1.0
CD1 A:LEU438 4.9 10.4 1.0
CD1 A:TYR383 5.0 10.0 1.0

Reference:

N.Muraki, C.Kitatsuji, Y.Okamoto, T.Uchida, K.Ishimori, S.Aono. Structural Basis For the Heme Transfer Reaction in Heme Uptake Machinery From Corynebacteria. Chem.Commun.(Camb.) V. 55 13864 2019.
ISSN: ESSN 1364-548X
PubMed: 31670736
DOI: 10.1039/C9CC07369H
Page generated: Tue Aug 6 23:34:19 2024

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