Iron in PDB 6jt6: Crystal Structure of Cytochrome B Domain of Pyranose Dehydrogenase From Coprinopsis Cinerea

The structure of Crystal Structure of Cytochrome B Domain of Pyranose Dehydrogenase From Coprinopsis Cinerea, PDB code: 6jt6 was solved by K.Takeda, T.Ishida, M.Yoshida, M.Samejima, H.Ohno, K.Igarashi, N.Nakamura, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.14 / 2.00
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	39.138, 59.741, 40.858, 90.00, 90.68, 90.00
R / Rfree (%)	15.4 / 20.4

The binding sites of Iron atom in the Crystal Structure of Cytochrome B Domain of Pyranose Dehydrogenase From Coprinopsis Cinerea (pdb code 6jt6). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Cytochrome B Domain of Pyranose Dehydrogenase From Coprinopsis Cinerea, PDB code: 6jt6:

Iron binding site 1 out of 1 in the Crystal Structure of Cytochrome B Domain of Pyranose Dehydrogenase From Coprinopsis Cinerea


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Cytochrome B Domain of Pyranose Dehydrogenase From Coprinopsis Cinerea within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe302 b:15.8 occ:1.00 FE A:HEM302 0.0 15.8 1.0 ND A:HEM302 1.9 16.1 1.0 NE2 A:HIS182 1.9 13.4 1.0 NA A:HEM302 2.0 18.2 1.0 NC A:HEM302 2.1 15.1 1.0 NB A:HEM302 2.1 16.9 1.0 SD A:MET83 2.3 15.2 1.0 CD2 A:HIS182 2.9 12.0 1.0 C4D A:HEM302 3.0 16.3 1.0 CE1 A:HIS182 3.0 12.7 1.0 C1D A:HEM302 3.0 15.3 1.0 C4A A:HEM302 3.0 18.8 1.0 C1A A:HEM302 3.0 19.1 1.0 C1B A:HEM302 3.1 18.1 1.0 C4C A:HEM302 3.1 14.3 1.0 C4B A:HEM302 3.1 16.6 1.0 C1C A:HEM302 3.1 14.8 1.0 CE A:MET83 3.4 13.7 1.0 CG A:MET83 3.4 13.9 1.0 CHB A:HEM302 3.4 17.8 1.0 CHA A:HEM302 3.4 17.0 1.0 CHD A:HEM302 3.4 14.6 1.0 CHC A:HEM302 3.5 15.8 1.0 ND1 A:HIS182 4.1 12.5 1.0 CB A:MET83 4.1 15.2 1.0 CG A:HIS182 4.1 12.5 1.0 C3A A:HEM302 4.2 20.9 1.0 C2D A:HEM302 4.2 16.2 1.0 C2A A:HEM302 4.2 21.2 1.0 C3D A:HEM302 4.2 16.0 1.0 C2C A:HEM302 4.3 13.9 1.0 C3C A:HEM302 4.3 14.1 1.0 C2B A:HEM302 4.3 18.7 1.0 C3B A:HEM302 4.3 18.4 1.0

K.Takeda, T.Ishida, M.Yoshida, M.Samejima, H.Ohno, K.Igarashi, N.Nakamura. The Crystal Structure of the Catalytic Domain and the Cytochromebdomain in A Eukaryotic Pqq-Dependent Dehydrogenase. Appl.Environ.Microbiol. 2019.
ISSN: ESSN 1098-5336
PubMed: 31604769
DOI: 10.1128/AEM.01692-19