Atomistry » Iron » PDB 6jsu-6kbh » 6jzz
Atomistry »
  Iron »
    PDB 6jsu-6kbh »
      6jzz »

Iron in PDB 6jzz: The Crystal Structure of Aar-C294S in Complex with Ado.

Enzymatic activity of The Crystal Structure of Aar-C294S in Complex with Ado.

All present enzymatic activity of The Crystal Structure of Aar-C294S in Complex with Ado.:
1.2.1.80; 4.1.99.5;

Protein crystallography data

The structure of The Crystal Structure of Aar-C294S in Complex with Ado., PDB code: 6jzz was solved by H.M.Zhang, M.Li, Y.Gao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.66 / 3.01
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 66.527, 72.335, 137.196, 90.00, 90.00, 90.00
R / Rfree (%) 20.7 / 26.9

Iron Binding Sites:

The binding sites of Iron atom in the The Crystal Structure of Aar-C294S in Complex with Ado. (pdb code 6jzz). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the The Crystal Structure of Aar-C294S in Complex with Ado., PDB code: 6jzz:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 6jzz

Go back to Iron Binding Sites List in 6jzz
Iron binding site 1 out of 2 in the The Crystal Structure of Aar-C294S in Complex with Ado.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The Crystal Structure of Aar-C294S in Complex with Ado. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe301

b:53.0
occ:1.00
OE1 B:GLU32 2.3 56.3 1.0
OE2 B:GLU60 2.4 63.9 1.0
OE2 B:GLU32 2.4 54.7 1.0
ND1 B:HIS63 2.6 63.7 1.0
OE1 B:GLU60 2.6 64.3 1.0
OE1 B:GLU144 2.7 60.2 1.0
CD B:GLU32 2.7 56.0 1.0
CD B:GLU60 2.8 64.3 1.0
FE B:FE2303 3.0 77.6 1.0
CD B:GLU144 3.1 60.3 1.0
OE2 B:GLU144 3.1 61.4 1.0
CE1 B:HIS63 3.4 64.0 1.0
CG B:HIS63 3.6 63.8 1.0
C1 B:PL3302 3.7 52.5 1.0
O1 B:PL3302 3.7 50.4 1.0
CB B:HIS63 3.9 67.2 1.0
CG B:GLU32 4.2 60.3 1.0
CG B:GLU60 4.2 70.1 1.0
CG B:GLU144 4.3 55.8 1.0
CA B:GLU60 4.5 73.3 1.0
OH B:TYR122 4.5 50.1 1.0
NE2 B:HIS63 4.6 66.4 1.0
CE1 B:HIS147 4.6 61.1 1.0
CG2 B:VAL140 4.6 59.0 1.0
CD2 B:HIS63 4.7 66.9 1.0
CB B:GLU60 4.7 71.4 1.0
CE2 B:TYR122 4.8 50.7 1.0
ND1 B:HIS147 4.8 59.8 1.0
CB B:GLU32 5.0 63.9 1.0

Iron binding site 2 out of 2 in 6jzz

Go back to Iron Binding Sites List in 6jzz
Iron binding site 2 out of 2 in the The Crystal Structure of Aar-C294S in Complex with Ado.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of The Crystal Structure of Aar-C294S in Complex with Ado. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe303

b:77.6
occ:1.00
OE2 B:GLU144 2.4 61.4 1.0
ND1 B:HIS147 2.5 59.8 1.0
OE1 B:GLU60 2.6 64.3 1.0
OE2 B:GLU60 2.6 63.9 1.0
OE2 B:GLU115 2.7 59.5 1.0
O1 B:PL3302 2.7 50.4 1.0
OE1 B:GLU144 2.7 60.2 1.0
CD B:GLU60 2.8 64.3 1.0
OE1 B:GLU115 2.8 54.8 1.0
CD B:GLU144 2.9 60.3 1.0
CE1 B:HIS147 2.9 61.1 1.0
FE B:FE2301 3.0 53.0 1.0
CD B:GLU115 3.1 56.5 1.0
C1 B:PL3302 3.8 52.5 1.0
CG B:HIS147 3.8 59.4 1.0
CG B:GLU60 4.0 70.1 1.0
NE2 B:HIS147 4.2 63.5 1.0
CG B:GLU144 4.3 55.8 1.0
CB B:HIS147 4.5 58.7 1.0
OE1 B:GLU32 4.5 56.3 1.0
CG B:GLU115 4.6 51.4 1.0
CD2 B:HIS147 4.7 60.5 1.0
CE2 B:TYR39 4.7 62.3 1.0
CA B:GLU144 4.7 57.4 1.0
CB B:ALA35 4.8 60.8 1.0
CB B:GLU144 4.8 55.9 1.0
ND1 B:HIS63 4.8 63.7 1.0

Reference:

Y.Gao, H.Zhang, M.Fan, C.Jia, L.Shi, X.Pan, P.Cao, X.Zhao, W.Chang, M.Li. Structural Insights Into Catalytic Mechanism and Product Delivery of Cyanobacterial Acyl-Acyl Carrier Protein Reductase Nat Commun 2020.
ISSN: ESSN 2041-1723
DOI: 10.1038/S41467-020-15268-Y
Page generated: Tue Aug 6 23:43:48 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy