Iron in PDB 6klv: Hyperthermophilic Respiratory Complex III
Iron Binding Sites:
The binding sites of Iron atom in the Hyperthermophilic Respiratory Complex III
(pdb code 6klv). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 10 binding sites of Iron where determined in the
Hyperthermophilic Respiratory Complex III, PDB code: 6klv:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 10 in 6klv
Go back to
Iron Binding Sites List in 6klv
Iron binding site 1 out
of 10 in the Hyperthermophilic Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Hyperthermophilic Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe501
b:0.0
occ:1.00
|
FE1
|
A:FES501
|
0.0
|
0.0
|
1.0
|
|
S1
|
A:FES501
|
2.2
|
0.2
|
1.0
|
|
S2
|
A:FES501
|
2.2
|
0.8
|
1.0
|
|
SG
|
A:CYS135
|
2.8
|
1.0
|
1.0
|
|
FE2
|
A:FES501
|
3.0
|
0.9
|
1.0
|
|
CB
|
A:CYS137
|
3.2
|
1.0
|
1.0
|
|
CB
|
A:CYS116
|
3.3
|
1.0
|
1.0
|
|
SG
|
A:CYS111
|
3.3
|
1.0
|
1.0
|
|
ND1
|
A:HIS138
|
3.4
|
1.0
|
1.0
|
|
CB
|
A:CYS111
|
3.6
|
1.0
|
1.0
|
|
SG
|
A:CYS116
|
3.6
|
1.0
|
1.0
|
|
SG
|
A:CYS137
|
3.8
|
1.0
|
1.0
|
|
CB
|
A:CYS135
|
3.9
|
1.0
|
1.0
|
|
CE1
|
A:HIS138
|
4.0
|
1.0
|
1.0
|
|
N
|
A:HIS138
|
4.0
|
1.0
|
1.0
|
|
CA
|
A:CYS137
|
4.2
|
1.0
|
1.0
|
|
N
|
A:CYS116
|
4.3
|
1.0
|
1.0
|
|
N
|
A:CYS137
|
4.3
|
1.0
|
1.0
|
|
CA
|
A:CYS116
|
4.4
|
1.0
|
1.0
|
|
CG
|
A:HIS138
|
4.4
|
1.0
|
1.0
|
|
C
|
A:CYS137
|
4.5
|
1.0
|
1.0
|
|
CB
|
A:HIS138
|
4.7
|
1.0
|
1.0
|
|
O
|
A:CYS135
|
4.8
|
1.0
|
1.0
|
|
CA
|
A:HIS138
|
5.0
|
1.0
|
1.0
|
|
Iron binding site 2 out
of 10 in 6klv
Go back to
Iron Binding Sites List in 6klv
Iron binding site 2 out
of 10 in the Hyperthermophilic Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Hyperthermophilic Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe501
b:0.9
occ:1.00
|
FE2
|
A:FES501
|
0.0
|
0.9
|
1.0
|
|
S1
|
A:FES501
|
2.2
|
0.2
|
1.0
|
|
S2
|
A:FES501
|
2.2
|
0.8
|
1.0
|
|
ND1
|
A:HIS113
|
2.6
|
1.0
|
1.0
|
|
CE1
|
A:HIS113
|
2.7
|
1.0
|
1.0
|
|
FE1
|
A:FES501
|
3.0
|
0.0
|
1.0
|
|
N
|
A:LEU114
|
3.1
|
1.0
|
1.0
|
|
SG
|
A:CYS111
|
3.3
|
1.0
|
1.0
|
|
CG
|
A:HIS113
|
3.3
|
1.0
|
1.0
|
|
ND1
|
A:HIS138
|
3.4
|
1.0
|
1.0
|
|
NE2
|
A:HIS113
|
3.5
|
1.0
|
1.0
|
|
CB
|
A:LEU114
|
3.6
|
1.0
|
1.0
|
|
CA
|
A:LEU114
|
3.8
|
1.0
|
1.0
|
|
CD2
|
A:HIS113
|
3.8
|
1.0
|
1.0
|
|
C
|
A:HIS113
|
3.9
|
1.0
|
1.0
|
|
N
|
A:HIS113
|
3.9
|
1.0
|
1.0
|
|
CE1
|
A:HIS138
|
3.9
|
1.0
|
1.0
|
|
CA
|
A:HIS113
|
4.1
|
1.0
|
1.0
|
|
CB
|
A:CYS111
|
4.2
|
1.0
|
1.0
|
|
CB
|
A:HIS113
|
4.2
|
1.0
|
1.0
|
|
N
|
A:GLY115
|
4.2
|
1.0
|
1.0
|
|
C
|
A:LEU114
|
4.3
|
1.0
|
1.0
|
|
CG
|
A:HIS138
|
4.4
|
1.0
|
1.0
|
|
CG
|
A:LEU114
|
4.5
|
1.0
|
1.0
|
|
N
|
A:THR112
|
4.7
|
1.0
|
1.0
|
|
C
|
A:THR112
|
4.7
|
1.0
|
1.0
|
|
O
|
A:HIS113
|
4.8
|
1.0
|
1.0
|
|
CB
|
A:HIS138
|
4.9
|
1.0
|
1.0
|
|
C
|
A:CYS111
|
5.0
|
1.0
|
1.0
|
|
Iron binding site 3 out
of 10 in 6klv
Go back to
Iron Binding Sites List in 6klv
Iron binding site 3 out
of 10 in the Hyperthermophilic Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Hyperthermophilic Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe501
b:12.6
occ:1.00
|
FE
|
B:HEM501
|
0.0
|
12.6
|
1.0
|
|
NA
|
B:HEM501
|
2.0
|
12.9
|
1.0
|
|
NB
|
B:HEM501
|
2.0
|
14.2
|
1.0
|
|
ND
|
B:HEM501
|
2.0
|
14.4
|
1.0
|
|
NC
|
B:HEM501
|
2.0
|
16.7
|
1.0
|
|
NE2
|
B:HIS91
|
2.4
|
30.0
|
1.0
|
|
NE2
|
B:HIS202
|
2.4
|
30.0
|
1.0
|
|
CE1
|
B:HIS202
|
2.7
|
30.0
|
1.0
|
|
C1A
|
B:HEM501
|
3.0
|
13.9
|
1.0
|
|
C4B
|
B:HEM501
|
3.0
|
13.3
|
1.0
|
|
C4D
|
B:HEM501
|
3.0
|
13.4
|
1.0
|
|
C1C
|
B:HEM501
|
3.0
|
16.0
|
1.0
|
|
C4A
|
B:HEM501
|
3.0
|
12.0
|
1.0
|
|
C1B
|
B:HEM501
|
3.0
|
13.2
|
1.0
|
|
CD2
|
B:HIS91
|
3.1
|
30.0
|
1.0
|
|
C1D
|
B:HEM501
|
3.1
|
13.7
|
1.0
|
|
C4C
|
B:HEM501
|
3.1
|
16.4
|
1.0
|
|
CHA
|
B:HEM501
|
3.3
|
12.7
|
1.0
|
|
CHC
|
B:HEM501
|
3.4
|
15.1
|
1.0
|
|
CHB
|
B:HEM501
|
3.4
|
13.1
|
1.0
|
|
CHD
|
B:HEM501
|
3.5
|
14.4
|
1.0
|
|
CE1
|
B:HIS91
|
3.5
|
30.0
|
1.0
|
|
CD2
|
B:HIS202
|
3.8
|
30.0
|
1.0
|
|
ND1
|
B:HIS202
|
4.0
|
30.0
|
1.0
|
|
C2A
|
B:HEM501
|
4.2
|
16.1
|
1.0
|
|
C3B
|
B:HEM501
|
4.2
|
13.9
|
1.0
|
|
C3A
|
B:HEM501
|
4.2
|
14.6
|
1.0
|
|
C2B
|
B:HEM501
|
4.2
|
14.2
|
1.0
|
|
C3D
|
B:HEM501
|
4.2
|
13.0
|
1.0
|
|
C2C
|
B:HEM501
|
4.2
|
17.5
|
1.0
|
|
C2D
|
B:HEM501
|
4.3
|
15.7
|
1.0
|
|
C3C
|
B:HEM501
|
4.3
|
17.6
|
1.0
|
|
CG
|
B:HIS91
|
4.3
|
30.0
|
1.0
|
|
ND1
|
B:HIS91
|
4.5
|
30.0
|
1.0
|
|
CG
|
B:HIS202
|
4.6
|
30.0
|
1.0
|
|
OE1
|
B:GLN51
|
4.8
|
30.0
|
1.0
|
|
CA
|
B:GLY140
|
5.0
|
14.4
|
1.0
|
|
Iron binding site 4 out
of 10 in 6klv
Go back to
Iron Binding Sites List in 6klv
Iron binding site 4 out
of 10 in the Hyperthermophilic Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Hyperthermophilic Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe502
b:16.0
occ:1.00
|
FE
|
B:HEM502
|
0.0
|
16.0
|
1.0
|
|
NB
|
B:HEM502
|
2.0
|
14.8
|
1.0
|
|
NC
|
B:HEM502
|
2.0
|
9.9
|
1.0
|
|
NA
|
B:HEM502
|
2.0
|
13.7
|
1.0
|
|
ND
|
B:HEM502
|
2.0
|
12.3
|
1.0
|
|
NE2
|
B:HIS105
|
2.4
|
30.0
|
1.0
|
|
NE2
|
B:HIS217
|
2.4
|
30.0
|
1.0
|
|
C4B
|
B:HEM502
|
3.0
|
14.4
|
1.0
|
|
C1B
|
B:HEM502
|
3.0
|
14.3
|
1.0
|
|
C1C
|
B:HEM502
|
3.0
|
13.2
|
1.0
|
|
C4A
|
B:HEM502
|
3.0
|
13.2
|
1.0
|
|
C4D
|
B:HEM502
|
3.0
|
14.4
|
1.0
|
|
C1A
|
B:HEM502
|
3.0
|
14.9
|
1.0
|
|
CD2
|
B:HIS217
|
3.1
|
30.0
|
1.0
|
|
C4C
|
B:HEM502
|
3.1
|
11.3
|
1.0
|
|
C1D
|
B:HEM502
|
3.1
|
12.6
|
1.0
|
|
CD2
|
B:HIS105
|
3.1
|
30.0
|
1.0
|
|
CHC
|
B:HEM502
|
3.4
|
14.9
|
1.0
|
|
CHB
|
B:HEM502
|
3.4
|
14.3
|
1.0
|
|
CHA
|
B:HEM502
|
3.4
|
15.5
|
1.0
|
|
CE1
|
B:HIS217
|
3.4
|
30.0
|
1.0
|
|
CHD
|
B:HEM502
|
3.5
|
12.7
|
1.0
|
|
CE1
|
B:HIS105
|
3.6
|
30.0
|
1.0
|
|
CG
|
B:HIS217
|
4.2
|
30.0
|
1.0
|
|
C3B
|
B:HEM502
|
4.2
|
16.6
|
1.0
|
|
C2B
|
B:HEM502
|
4.2
|
14.4
|
1.0
|
|
C3A
|
B:HEM502
|
4.2
|
13.2
|
1.0
|
|
C2C
|
B:HEM502
|
4.2
|
12.6
|
1.0
|
|
C2A
|
B:HEM502
|
4.2
|
11.8
|
1.0
|
|
C3D
|
B:HEM502
|
4.2
|
15.2
|
1.0
|
|
C3C
|
B:HEM502
|
4.3
|
10.8
|
1.0
|
|
C2D
|
B:HEM502
|
4.3
|
14.2
|
1.0
|
|
ND1
|
B:HIS217
|
4.3
|
30.0
|
1.0
|
|
CG
|
B:HIS105
|
4.3
|
30.0
|
1.0
|
|
ND1
|
B:HIS105
|
4.5
|
30.0
|
1.0
|
|
Iron binding site 5 out
of 10 in 6klv
Go back to
Iron Binding Sites List in 6klv
Iron binding site 5 out
of 10 in the Hyperthermophilic Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Hyperthermophilic Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe501
b:28.2
occ:1.00
|
FE
|
C:HEC501
|
0.0
|
28.2
|
1.0
|
|
NB
|
C:HEC501
|
2.0
|
25.6
|
1.0
|
|
NA
|
C:HEC501
|
2.0
|
25.3
|
1.0
|
|
NC
|
C:HEC501
|
2.0
|
26.2
|
1.0
|
|
ND
|
C:HEC501
|
2.1
|
25.9
|
1.0
|
|
NE2
|
C:HIS74
|
2.5
|
4.8
|
1.0
|
|
SD
|
C:MET171
|
2.9
|
30.0
|
1.0
|
|
C4B
|
C:HEC501
|
3.0
|
25.8
|
1.0
|
|
C1B
|
C:HEC501
|
3.0
|
24.2
|
1.0
|
|
C4D
|
C:HEC501
|
3.0
|
27.5
|
1.0
|
|
C4A
|
C:HEC501
|
3.0
|
26.8
|
1.0
|
|
C1C
|
C:HEC501
|
3.1
|
26.5
|
1.0
|
|
C1A
|
C:HEC501
|
3.1
|
26.6
|
1.0
|
|
C4C
|
C:HEC501
|
3.1
|
27.1
|
1.0
|
|
C1D
|
C:HEC501
|
3.1
|
27.9
|
1.0
|
|
CD2
|
C:HIS74
|
3.2
|
4.8
|
1.0
|
|
CG
|
C:MET171
|
3.3
|
30.0
|
1.0
|
|
CE
|
C:MET171
|
3.4
|
30.0
|
1.0
|
|
CHA
|
C:HEC501
|
3.4
|
26.3
|
1.0
|
|
CHC
|
C:HEC501
|
3.4
|
25.5
|
1.0
|
|
CHB
|
C:HEC501
|
3.4
|
26.2
|
1.0
|
|
CHD
|
C:HEC501
|
3.4
|
27.9
|
1.0
|
|
CE1
|
C:HIS74
|
3.6
|
4.8
|
1.0
|
|
CB
|
C:MET171
|
4.2
|
30.0
|
1.0
|
|
C3B
|
C:HEC501
|
4.2
|
24.5
|
1.0
|
|
C2B
|
C:HEC501
|
4.2
|
22.6
|
1.0
|
|
C3A
|
C:HEC501
|
4.2
|
27.0
|
1.0
|
|
C3D
|
C:HEC501
|
4.3
|
30.4
|
1.0
|
|
C2A
|
C:HEC501
|
4.3
|
27.7
|
1.0
|
|
C2C
|
C:HEC501
|
4.3
|
25.4
|
1.0
|
|
C3C
|
C:HEC501
|
4.3
|
26.2
|
1.0
|
|
C2D
|
C:HEC501
|
4.3
|
29.8
|
1.0
|
|
CG
|
C:HIS74
|
4.4
|
4.8
|
1.0
|
|
ND1
|
C:HIS74
|
4.6
|
4.8
|
1.0
|
|
CE2
|
C:PHE158
|
4.9
|
30.0
|
1.0
|
|
Iron binding site 6 out
of 10 in 6klv
Go back to
Iron Binding Sites List in 6klv
Iron binding site 6 out
of 10 in the Hyperthermophilic Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Hyperthermophilic Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe501
b:0.0
occ:1.00
|
FE1
|
D:FES501
|
0.0
|
0.0
|
1.0
|
|
S1
|
D:FES501
|
2.2
|
0.2
|
1.0
|
|
S2
|
D:FES501
|
2.2
|
0.8
|
1.0
|
|
SG
|
D:CYS135
|
2.8
|
1.0
|
1.0
|
|
FE2
|
D:FES501
|
3.0
|
0.9
|
1.0
|
|
CB
|
D:CYS137
|
3.2
|
1.0
|
1.0
|
|
CB
|
D:CYS116
|
3.3
|
1.0
|
1.0
|
|
SG
|
D:CYS111
|
3.3
|
1.0
|
1.0
|
|
ND1
|
D:HIS138
|
3.4
|
1.0
|
1.0
|
|
CB
|
D:CYS111
|
3.6
|
1.0
|
1.0
|
|
SG
|
D:CYS116
|
3.6
|
1.0
|
1.0
|
|
SG
|
D:CYS137
|
3.8
|
1.0
|
1.0
|
|
CB
|
D:CYS135
|
3.9
|
1.0
|
1.0
|
|
CE1
|
D:HIS138
|
4.0
|
1.0
|
1.0
|
|
N
|
D:HIS138
|
4.0
|
1.0
|
1.0
|
|
CA
|
D:CYS137
|
4.2
|
1.0
|
1.0
|
|
N
|
D:CYS116
|
4.3
|
1.0
|
1.0
|
|
N
|
D:CYS137
|
4.3
|
1.0
|
1.0
|
|
CA
|
D:CYS116
|
4.4
|
1.0
|
1.0
|
|
CG
|
D:HIS138
|
4.4
|
1.0
|
1.0
|
|
C
|
D:CYS137
|
4.5
|
1.0
|
1.0
|
|
CB
|
D:HIS138
|
4.7
|
1.0
|
1.0
|
|
O
|
D:CYS135
|
4.8
|
1.0
|
1.0
|
|
CA
|
D:HIS138
|
5.0
|
1.0
|
1.0
|
|
Iron binding site 7 out
of 10 in 6klv
Go back to
Iron Binding Sites List in 6klv
Iron binding site 7 out
of 10 in the Hyperthermophilic Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Hyperthermophilic Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe501
b:0.9
occ:1.00
|
FE2
|
D:FES501
|
0.0
|
0.9
|
1.0
|
|
S1
|
D:FES501
|
2.2
|
0.2
|
1.0
|
|
S2
|
D:FES501
|
2.2
|
0.8
|
1.0
|
|
ND1
|
D:HIS113
|
2.6
|
1.0
|
1.0
|
|
CE1
|
D:HIS113
|
2.7
|
1.0
|
1.0
|
|
FE1
|
D:FES501
|
3.0
|
0.0
|
1.0
|
|
N
|
D:LEU114
|
3.1
|
1.0
|
1.0
|
|
SG
|
D:CYS111
|
3.3
|
1.0
|
1.0
|
|
CG
|
D:HIS113
|
3.3
|
1.0
|
1.0
|
|
ND1
|
D:HIS138
|
3.4
|
1.0
|
1.0
|
|
NE2
|
D:HIS113
|
3.5
|
1.0
|
1.0
|
|
CB
|
D:LEU114
|
3.6
|
1.0
|
1.0
|
|
CA
|
D:LEU114
|
3.8
|
1.0
|
1.0
|
|
CD2
|
D:HIS113
|
3.8
|
1.0
|
1.0
|
|
C
|
D:HIS113
|
3.9
|
1.0
|
1.0
|
|
N
|
D:HIS113
|
3.9
|
1.0
|
1.0
|
|
CE1
|
D:HIS138
|
3.9
|
1.0
|
1.0
|
|
CA
|
D:HIS113
|
4.1
|
1.0
|
1.0
|
|
CB
|
D:CYS111
|
4.2
|
1.0
|
1.0
|
|
CB
|
D:HIS113
|
4.2
|
1.0
|
1.0
|
|
N
|
D:GLY115
|
4.2
|
1.0
|
1.0
|
|
C
|
D:LEU114
|
4.3
|
1.0
|
1.0
|
|
CG
|
D:HIS138
|
4.4
|
1.0
|
1.0
|
|
CG
|
D:LEU114
|
4.5
|
1.0
|
1.0
|
|
N
|
D:THR112
|
4.7
|
1.0
|
1.0
|
|
C
|
D:THR112
|
4.7
|
1.0
|
1.0
|
|
O
|
D:HIS113
|
4.8
|
1.0
|
1.0
|
|
CB
|
D:HIS138
|
4.9
|
1.0
|
1.0
|
|
C
|
D:CYS111
|
5.0
|
1.0
|
1.0
|
|
Iron binding site 8 out
of 10 in 6klv
Go back to
Iron Binding Sites List in 6klv
Iron binding site 8 out
of 10 in the Hyperthermophilic Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Hyperthermophilic Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe501
b:12.6
occ:1.00
|
FE
|
E:HEM501
|
0.0
|
12.6
|
1.0
|
|
NA
|
E:HEM501
|
2.0
|
12.9
|
1.0
|
|
NB
|
E:HEM501
|
2.0
|
14.2
|
1.0
|
|
ND
|
E:HEM501
|
2.0
|
14.4
|
1.0
|
|
NC
|
E:HEM501
|
2.0
|
16.7
|
1.0
|
|
NE2
|
E:HIS91
|
2.4
|
30.0
|
1.0
|
|
NE2
|
E:HIS202
|
2.4
|
30.0
|
1.0
|
|
CE1
|
E:HIS202
|
2.7
|
30.0
|
1.0
|
|
C1A
|
E:HEM501
|
3.0
|
13.9
|
1.0
|
|
C4B
|
E:HEM501
|
3.0
|
13.3
|
1.0
|
|
C4D
|
E:HEM501
|
3.0
|
13.4
|
1.0
|
|
C1C
|
E:HEM501
|
3.0
|
16.0
|
1.0
|
|
C4A
|
E:HEM501
|
3.0
|
12.0
|
1.0
|
|
C1B
|
E:HEM501
|
3.0
|
13.2
|
1.0
|
|
CD2
|
E:HIS91
|
3.1
|
30.0
|
1.0
|
|
C1D
|
E:HEM501
|
3.1
|
13.7
|
1.0
|
|
C4C
|
E:HEM501
|
3.1
|
16.4
|
1.0
|
|
CHA
|
E:HEM501
|
3.3
|
12.7
|
1.0
|
|
CHC
|
E:HEM501
|
3.4
|
15.1
|
1.0
|
|
CHB
|
E:HEM501
|
3.4
|
13.1
|
1.0
|
|
CHD
|
E:HEM501
|
3.5
|
14.4
|
1.0
|
|
CE1
|
E:HIS91
|
3.5
|
30.0
|
1.0
|
|
CD2
|
E:HIS202
|
3.8
|
30.0
|
1.0
|
|
ND1
|
E:HIS202
|
4.0
|
30.0
|
1.0
|
|
C2A
|
E:HEM501
|
4.2
|
16.1
|
1.0
|
|
C3B
|
E:HEM501
|
4.2
|
13.9
|
1.0
|
|
C3A
|
E:HEM501
|
4.2
|
14.6
|
1.0
|
|
C2B
|
E:HEM501
|
4.2
|
14.2
|
1.0
|
|
C3D
|
E:HEM501
|
4.2
|
13.0
|
1.0
|
|
C2C
|
E:HEM501
|
4.2
|
17.5
|
1.0
|
|
C2D
|
E:HEM501
|
4.3
|
15.7
|
1.0
|
|
C3C
|
E:HEM501
|
4.3
|
17.6
|
1.0
|
|
CG
|
E:HIS91
|
4.3
|
30.0
|
1.0
|
|
ND1
|
E:HIS91
|
4.5
|
30.0
|
1.0
|
|
CG
|
E:HIS202
|
4.6
|
30.0
|
1.0
|
|
OE1
|
E:GLN51
|
4.8
|
30.0
|
1.0
|
|
CA
|
E:GLY140
|
5.0
|
14.4
|
1.0
|
|
Iron binding site 9 out
of 10 in 6klv
Go back to
Iron Binding Sites List in 6klv
Iron binding site 9 out
of 10 in the Hyperthermophilic Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Hyperthermophilic Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe502
b:16.0
occ:1.00
|
FE
|
E:HEM502
|
0.0
|
16.0
|
1.0
|
|
NB
|
E:HEM502
|
2.0
|
14.8
|
1.0
|
|
NC
|
E:HEM502
|
2.0
|
9.9
|
1.0
|
|
NA
|
E:HEM502
|
2.0
|
13.7
|
1.0
|
|
ND
|
E:HEM502
|
2.0
|
12.3
|
1.0
|
|
NE2
|
E:HIS105
|
2.4
|
30.0
|
1.0
|
|
NE2
|
E:HIS217
|
2.4
|
30.0
|
1.0
|
|
C4B
|
E:HEM502
|
3.0
|
14.4
|
1.0
|
|
C1B
|
E:HEM502
|
3.0
|
14.3
|
1.0
|
|
C1C
|
E:HEM502
|
3.0
|
13.2
|
1.0
|
|
C4A
|
E:HEM502
|
3.0
|
13.2
|
1.0
|
|
C4D
|
E:HEM502
|
3.0
|
14.4
|
1.0
|
|
C1A
|
E:HEM502
|
3.0
|
14.9
|
1.0
|
|
CD2
|
E:HIS217
|
3.1
|
30.0
|
1.0
|
|
C4C
|
E:HEM502
|
3.1
|
11.3
|
1.0
|
|
C1D
|
E:HEM502
|
3.1
|
12.6
|
1.0
|
|
CD2
|
E:HIS105
|
3.1
|
30.0
|
1.0
|
|
CHC
|
E:HEM502
|
3.4
|
14.9
|
1.0
|
|
CHB
|
E:HEM502
|
3.4
|
14.3
|
1.0
|
|
CHA
|
E:HEM502
|
3.4
|
15.5
|
1.0
|
|
CE1
|
E:HIS217
|
3.4
|
30.0
|
1.0
|
|
CHD
|
E:HEM502
|
3.5
|
12.7
|
1.0
|
|
CE1
|
E:HIS105
|
3.6
|
30.0
|
1.0
|
|
CG
|
E:HIS217
|
4.2
|
30.0
|
1.0
|
|
C3B
|
E:HEM502
|
4.2
|
16.6
|
1.0
|
|
C2B
|
E:HEM502
|
4.2
|
14.4
|
1.0
|
|
C3A
|
E:HEM502
|
4.2
|
13.2
|
1.0
|
|
C2C
|
E:HEM502
|
4.2
|
12.6
|
1.0
|
|
C2A
|
E:HEM502
|
4.2
|
11.8
|
1.0
|
|
C3D
|
E:HEM502
|
4.2
|
15.2
|
1.0
|
|
C3C
|
E:HEM502
|
4.3
|
10.8
|
1.0
|
|
C2D
|
E:HEM502
|
4.3
|
14.2
|
1.0
|
|
ND1
|
E:HIS217
|
4.3
|
30.0
|
1.0
|
|
CG
|
E:HIS105
|
4.3
|
30.0
|
1.0
|
|
ND1
|
E:HIS105
|
4.5
|
30.0
|
1.0
|
|
Iron binding site 10 out
of 10 in 6klv
Go back to
Iron Binding Sites List in 6klv
Iron binding site 10 out
of 10 in the Hyperthermophilic Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Hyperthermophilic Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe501
b:28.2
occ:1.00
|
FE
|
F:HEC501
|
0.0
|
28.2
|
1.0
|
|
NB
|
F:HEC501
|
2.0
|
25.6
|
1.0
|
|
NA
|
F:HEC501
|
2.0
|
25.3
|
1.0
|
|
NC
|
F:HEC501
|
2.0
|
26.2
|
1.0
|
|
ND
|
F:HEC501
|
2.1
|
25.9
|
1.0
|
|
NE2
|
F:HIS74
|
2.5
|
4.8
|
1.0
|
|
SD
|
F:MET171
|
2.9
|
30.0
|
1.0
|
|
C4B
|
F:HEC501
|
3.0
|
25.8
|
1.0
|
|
C1B
|
F:HEC501
|
3.0
|
24.2
|
1.0
|
|
C4D
|
F:HEC501
|
3.0
|
27.5
|
1.0
|
|
C4A
|
F:HEC501
|
3.0
|
26.8
|
1.0
|
|
C1C
|
F:HEC501
|
3.1
|
26.5
|
1.0
|
|
C1A
|
F:HEC501
|
3.1
|
26.6
|
1.0
|
|
C4C
|
F:HEC501
|
3.1
|
27.1
|
1.0
|
|
C1D
|
F:HEC501
|
3.1
|
27.9
|
1.0
|
|
CD2
|
F:HIS74
|
3.2
|
4.8
|
1.0
|
|
CG
|
F:MET171
|
3.3
|
30.0
|
1.0
|
|
CE
|
F:MET171
|
3.4
|
30.0
|
1.0
|
|
CHA
|
F:HEC501
|
3.4
|
26.3
|
1.0
|
|
CHC
|
F:HEC501
|
3.4
|
25.5
|
1.0
|
|
CHB
|
F:HEC501
|
3.4
|
26.2
|
1.0
|
|
CHD
|
F:HEC501
|
3.4
|
27.9
|
1.0
|
|
CE1
|
F:HIS74
|
3.6
|
4.8
|
1.0
|
|
CB
|
F:MET171
|
4.2
|
30.0
|
1.0
|
|
C3B
|
F:HEC501
|
4.2
|
24.5
|
1.0
|
|
C2B
|
F:HEC501
|
4.2
|
22.6
|
1.0
|
|
C3A
|
F:HEC501
|
4.2
|
27.0
|
1.0
|
|
C3D
|
F:HEC501
|
4.3
|
30.4
|
1.0
|
|
C2A
|
F:HEC501
|
4.3
|
27.7
|
1.0
|
|
C3C
|
F:HEC501
|
4.3
|
26.2
|
1.0
|
|
C2C
|
F:HEC501
|
4.3
|
25.4
|
1.0
|
|
C2D
|
F:HEC501
|
4.3
|
29.8
|
1.0
|
|
CG
|
F:HIS74
|
4.4
|
4.8
|
1.0
|
|
ND1
|
F:HIS74
|
4.6
|
4.8
|
1.0
|
|
CE2
|
F:PHE158
|
4.9
|
30.0
|
1.0
|
|
Reference:
G.Zhu,
H.Zeng,
S.Zhang,
J.Juli,
X.Pang,
J.Hoffmann,
Y.Zhang,
N.Morgner,
Y.Zhu,
G.Peng,
H.Michel,
F.Sun.
A 3.3 Angstrom -Resolution Structure of Hyperthermophilic Respiratory Complex III Reveals the Mechanism of Its Thermal Stability. Angew.Chem.Int.Ed.Engl. V. 59 343 2020.
ISSN: ESSN 1521-3773
PubMed: 31778296
DOI: 10.1002/ANIE.201911554
Page generated: Wed Aug 7 00:18:08 2024
|
