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Iron in PDB 6koe: X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis
Protein crystallography data
The structure of X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis, PDB code: 6koe
was solved by
J.Xu,
Z.Ding,
B.Liu,
J.Li,
R.B.Gennis,
J.Zhu,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 49.25 / 3.75 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 112.988, 162.110, 149.509, 90.00, 109.02, 90.00 |
| R / Rfree (%) | 34.7 / 36.8 |
Other elements in 6koe:
The structure of X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis also contains other interesting chemical elements:
| Copper | (Cu) | 2 atoms |
Iron Binding Sites:
The binding sites of Iron atom in the X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis
(pdb code 6koe). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis, PDB code: 6koe:
Jump to Iron binding site number: 1; 2; 3; 4;
In total 4 binding sites of Iron where determined in the X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis, PDB code: 6koe:
Jump to Iron binding site number: 1; 2; 3; 4;
Iron binding site 1 out of 4 in 6koe
Go back to
Iron Binding Sites List in 6koe
Iron binding site 1 out
of 4 in the X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis within 5.0Å range:
|
Iron binding site 2 out of 4 in 6koe
Go back to
Iron Binding Sites List in 6koe
Iron binding site 2 out
of 4 in the X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis within 5.0Å range:
|
Iron binding site 3 out of 4 in 6koe
Go back to
Iron Binding Sites List in 6koe
Iron binding site 3 out
of 4 in the X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis within 5.0Å range:
|
Iron binding site 4 out of 4 in 6koe
Go back to
Iron Binding Sites List in 6koe
Iron binding site 4 out
of 4 in the X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of X-Ray Structure of the Proton-Pumping Cytochrome AA3-600 Menaquinol Oxidase From Bacillus Subtilis within 5.0Å range:
|
Reference:
J.Xu,
Z.Ding,
B.Liu,
S.M.Yi,
J.Li,
Z.Zhang,
Y.Liu,
J.Li,
L.Liu,
A.Zhou,
R.B.Gennis,
J.Zhu.
Structure of the Cytochrome AA3-600 Heme-Copper Menaquinol Oxidase Bound to Inhibitor Hqno Shows TM0 Is Part of the Quinol Binding Site Proc.Natl.Acad.Sci.Usa 2010.
ISSN: ESSN 1091-6490
DOI: 10.1073/PNAS.1915013117
Page generated: Sun Dec 13 16:37:33 2020
ISSN: ESSN 1091-6490
DOI: 10.1073/PNAS.1915013117
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