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Iron in PDB 6l32: Crystal Structure of Potassium Induced Heme Modification in Yak Lactoperoxidase at 2.30 A Resolution

Protein crystallography data

The structure of Crystal Structure of Potassium Induced Heme Modification in Yak Lactoperoxidase at 2.30 A Resolution, PDB code: 6l32 was solved by P.K.Singh, C.Rani, P.Sharma, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 58.11 / 2.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 79.700, 84.710, 98.750, 90.00, 90.00, 90.00
R / Rfree (%) 19 / 24.4

Other elements in 6l32:

The structure of Crystal Structure of Potassium Induced Heme Modification in Yak Lactoperoxidase at 2.30 A Resolution also contains other interesting chemical elements:

Potassium (K) 2 atoms
Zinc (Zn) 1 atom
Calcium (Ca) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Potassium Induced Heme Modification in Yak Lactoperoxidase at 2.30 A Resolution (pdb code 6l32). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Potassium Induced Heme Modification in Yak Lactoperoxidase at 2.30 A Resolution, PDB code: 6l32:

Iron binding site 1 out of 1 in 6l32

Go back to Iron Binding Sites List in 6l32
Iron binding site 1 out of 1 in the Crystal Structure of Potassium Induced Heme Modification in Yak Lactoperoxidase at 2.30 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Potassium Induced Heme Modification in Yak Lactoperoxidase at 2.30 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe608

b:16.1
occ:1.00
FE A:HEM608 0.0 16.1 1.0
ND A:HEM608 1.9 16.6 1.0
NA A:HEM608 2.0 16.4 0.7
NA A:HEM608 2.0 16.3 0.3
NE2 A:HIS351 2.0 17.4 1.0
O A:HOH817 2.0 20.4 1.0
NC A:HEM608 2.1 15.8 1.0
NB A:HEM608 2.1 16.0 1.0
C4D A:HEM608 2.9 16.8 1.0
C1D A:HEM608 2.9 16.4 1.0
C1A A:HEM608 3.0 16.6 0.7
C1A A:HEM608 3.0 16.6 0.3
CD2 A:HIS351 3.0 17.4 1.0
CE1 A:HIS351 3.0 17.0 1.0
C4C A:HEM608 3.0 15.5 1.0
C4A A:HEM608 3.1 16.3 1.0
C1B A:HEM608 3.1 15.5 1.0
C4B A:HEM608 3.1 15.7 1.0
C1C A:HEM608 3.1 15.8 1.0
CHA A:HEM608 3.3 16.1 1.0
CHD A:HEM608 3.3 16.3 1.0
CHB A:HEM608 3.5 16.1 1.0
CHC A:HEM608 3.5 15.5 1.0
K A:K609 3.6 16.9 1.0
C2D A:HEM608 4.1 16.9 1.0
C3D A:HEM608 4.1 16.7 1.0
ND1 A:HIS351 4.1 16.9 1.0
CG A:HIS351 4.1 17.4 1.0
C2A A:HEM608 4.2 17.0 1.0
C3A A:HEM608 4.2 16.2 1.0
C3C A:HEM608 4.3 15.2 1.0
NE2 A:GLN105 4.3 12.7 1.0
C2C A:HEM608 4.3 14.9 1.0
C2B A:HEM608 4.3 15.7 1.0
C3B A:HEM608 4.4 15.4 1.0
O1D A:HEM608 4.5 20.6 0.7
CD2 A:LEU433 4.7 13.1 1.0
O A:HOH995 4.9 14.7 1.0
CG A:GLN105 4.9 13.1 1.0

Reference:

P.K.Singh, C.Rani, P.Sharma, S.Sharma, T.P.Singh. Crystal Structure of Potassium Induced Heme Modification in Yak Lactoperoxidase at 2.30 A Resolution To Be Published.
Page generated: Wed Aug 7 00:31:49 2024

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