Iron in PDB 6lqw: Crystal Structure of A Dimeric Yak Lactoperoxidase at 2.59 A Resolution.

The structure of Crystal Structure of A Dimeric Yak Lactoperoxidase at 2.59 A Resolution., PDB code: 6lqw was solved by V.Viswanathan, S.N.Pandey, N.Ahmad, C.Rani, P.Sharma, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.64 / 2.60
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	81.295, 96.732, 83.931, 90.00, 90.30, 90.00
R / Rfree (%)	21.2 / 29.2

The structure of Crystal Structure of A Dimeric Yak Lactoperoxidase at 2.59 A Resolution. also contains other interesting chemical elements:

Chlorine	(Cl)	2 atoms
Calcium	(Ca)	2 atoms

The binding sites of Iron atom in the Crystal Structure of A Dimeric Yak Lactoperoxidase at 2.59 A Resolution. (pdb code 6lqw). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of A Dimeric Yak Lactoperoxidase at 2.59 A Resolution., PDB code: 6lqw:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Crystal Structure of A Dimeric Yak Lactoperoxidase at 2.59 A Resolution.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of A Dimeric Yak Lactoperoxidase at 2.59 A Resolution. within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe603 b:20.3 occ:1.00 FE A:HEM603 0.0 20.3 1.0 NC A:HEM603 1.9 15.0 1.0 ND A:HEM603 2.0 16.7 1.0 NB A:HEM603 2.0 14.0 1.0 NA A:HEM603 2.1 13.6 1.0 NE2 A:HIS351 2.3 15.8 1.0 O2 A:PEO604 2.8 16.3 1.0 C1C A:HEM603 3.0 15.8 1.0 C4C A:HEM603 3.0 15.4 1.0 C1D A:HEM603 3.0 19.5 1.0 C4B A:HEM603 3.0 14.6 1.0 C4D A:HEM603 3.1 17.8 1.0 C1A A:HEM603 3.1 16.4 1.0 C4A A:HEM603 3.1 17.4 1.0 C1B A:HEM603 3.1 15.9 1.0 O1 A:PEO604 3.1 20.9 1.0 CD2 A:HIS351 3.2 20.8 1.0 CE1 A:HIS351 3.3 19.3 1.0 CHC A:HEM603 3.3 14.9 1.0 CHD A:HEM603 3.4 16.0 1.0 CHA A:HEM603 3.5 18.4 1.0 CHB A:HEM603 3.5 15.4 1.0 C2C A:HEM603 4.2 19.6 1.0 C3C A:HEM603 4.2 14.3 1.0 NE2 A:GLN105 4.2 17.6 1.0 C2D A:HEM603 4.2 19.5 1.0 C3B A:HEM603 4.3 13.9 1.0 C3D A:HEM603 4.3 22.5 1.0 C2B A:HEM603 4.3 16.8 1.0 C2A A:HEM603 4.3 19.1 1.0 C3A A:HEM603 4.3 22.6 1.0 CG A:HIS351 4.4 22.0 1.0 ND1 A:HIS351 4.4 21.7 1.0 CD2 A:LEU433 4.8 17.9 1.0

Iron binding site 2 out of 2 in the Crystal Structure of A Dimeric Yak Lactoperoxidase at 2.59 A Resolution.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of A Dimeric Yak Lactoperoxidase at 2.59 A Resolution. within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe605 b:16.1 occ:1.00 FE B:HEM605 0.0 16.1 1.0 ND B:HEM605 2.0 13.4 1.0 NA B:HEM605 2.0 14.1 1.0 NB B:HEM605 2.1 16.9 1.0 NC B:HEM605 2.1 11.8 1.0 NE2 B:HIS351 2.4 15.9 1.0 O2 B:PEO606 2.9 20.1 1.0 C1D B:HEM605 3.0 14.1 1.0 C4D B:HEM605 3.0 18.3 1.0 C4C B:HEM605 3.1 16.1 1.0 C1A B:HEM605 3.1 13.8 1.0 C4A B:HEM605 3.1 15.6 1.0 C4B B:HEM605 3.1 17.3 1.0 C1B B:HEM605 3.1 18.7 1.0 C1C B:HEM605 3.1 12.5 1.0 CD2 B:HIS351 3.3 14.8 1.0 CHD B:HEM605 3.4 16.4 1.0 CHA B:HEM605 3.4 15.3 1.0 CHB B:HEM605 3.4 16.1 1.0 CHC B:HEM605 3.5 14.2 1.0 CE1 B:HIS351 3.5 17.0 1.0 O1 B:PEO606 3.7 31.1 1.0 C2D B:HEM605 4.3 17.7 1.0 C3D B:HEM605 4.3 19.0 1.0 C2A B:HEM605 4.3 14.8 1.0 C3A B:HEM605 4.3 18.7 1.0 C3C B:HEM605 4.3 14.8 1.0 C3B B:HEM605 4.3 16.2 1.0 C2B B:HEM605 4.3 21.6 1.0 C2C B:HEM605 4.3 15.5 1.0 NE2 B:GLN105 4.4 19.3 1.0 CG B:HIS351 4.5 19.6 1.0 ND1 B:HIS351 4.5 16.3 1.0 CD2 B:LEU433 4.8 14.9 1.0

V.Viswanathan, S.N.Pandey, P.Sharma, C.Rani, N.Ahmad, S.Sharma, T.P.Singh. Crystal Structure of A Dimeric Yak Lactoperoxidase at 2.59 A Resolution. To Be Published.