Iron »
PDB 6ll0-6m52 »
6lvv »
Iron in PDB 6lvv: N, N-Dimethylformamidase
Enzymatic activity of N, N-Dimethylformamidase
All present enzymatic activity of N, N-Dimethylformamidase:
3.5.1.56;
3.5.1.56;
Protein crystallography data
The structure of N, N-Dimethylformamidase, PDB code: 6lvv
was solved by
C.K.Arya,
S.Ramaswamy,
R.V.Kutti,
R.Gurunath,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 49.47 / 2.80 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 160.514, 142.553, 181.488, 90.00, 92.92, 90.00 |
| R / Rfree (%) | 22.7 / 26.7 |
Iron Binding Sites:
The binding sites of Iron atom in the N, N-Dimethylformamidase
(pdb code 6lvv). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the N, N-Dimethylformamidase, PDB code: 6lvv:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Iron where determined in the N, N-Dimethylformamidase, PDB code: 6lvv:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Iron binding site 1 out of 8 in 6lvv
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Iron Binding Sites List in 6lvv
Iron binding site 1 out
of 8 in the N, N-Dimethylformamidase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of N, N-Dimethylformamidase within 5.0Å range:
|
Iron binding site 2 out of 8 in 6lvv
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Iron Binding Sites List in 6lvv
Iron binding site 2 out
of 8 in the N, N-Dimethylformamidase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of N, N-Dimethylformamidase within 5.0Å range:
|
Iron binding site 3 out of 8 in 6lvv
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Iron Binding Sites List in 6lvv
Iron binding site 3 out
of 8 in the N, N-Dimethylformamidase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of N, N-Dimethylformamidase within 5.0Å range:
|
Iron binding site 4 out of 8 in 6lvv
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Iron Binding Sites List in 6lvv
Iron binding site 4 out
of 8 in the N, N-Dimethylformamidase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of N, N-Dimethylformamidase within 5.0Å range:
|
Iron binding site 5 out of 8 in 6lvv
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Iron Binding Sites List in 6lvv
Iron binding site 5 out
of 8 in the N, N-Dimethylformamidase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 5 of N, N-Dimethylformamidase within 5.0Å range:
|
Iron binding site 6 out of 8 in 6lvv
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Iron Binding Sites List in 6lvv
Iron binding site 6 out
of 8 in the N, N-Dimethylformamidase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 6 of N, N-Dimethylformamidase within 5.0Å range:
|
Iron binding site 7 out of 8 in 6lvv
Go back to
Iron Binding Sites List in 6lvv
Iron binding site 7 out
of 8 in the N, N-Dimethylformamidase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 7 of N, N-Dimethylformamidase within 5.0Å range:
|
Iron binding site 8 out of 8 in 6lvv
Go back to
Iron Binding Sites List in 6lvv
Iron binding site 8 out
of 8 in the N, N-Dimethylformamidase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 8 of N, N-Dimethylformamidase within 5.0Å range:
|
Reference:
C.K.Arya,
S.Yadav,
J.Fine,
A.Casanal,
G.Chopra,
G.Ramanathan,
K.R.Vinothkumar,
R.Subramanian.
A 2-Tyr-1-Carboxylate Mononuclear Iron Center Forms the Active Site of A Paracoccus Dimethylformamidase. Angew.Chem.Int.Ed.Engl. 2020.
ISSN: ESSN 1521-3773
PubMed: 32452120
DOI: 10.1002/ANIE.202005332
Page generated: Sun Dec 13 16:40:58 2020
ISSN: ESSN 1521-3773
PubMed: 32452120
DOI: 10.1002/ANIE.202005332
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