Iron in PDB 6m32: Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria

The structure of Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria also contains other interesting chemical elements:

Magnesium	(Mg)	54 atoms
Calcium	(Ca)	2 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Iron atom in the Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria (pdb code 6m32). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 12 binding sites of Iron where determined in the Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria, PDB code: 6m32:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 12 in the Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe301 b:47.8 occ:1.00 FE1 B:SF4301 0.0 47.8 1.0 SG B:CYS143 2.2 44.1 1.0 S4 B:SF4301 2.3 47.8 1.0 S2 B:SF4301 2.3 47.8 1.0 S3 B:SF4301 2.3 47.8 1.0 FE2 B:SF4301 2.7 47.8 1.0 FE4 B:SF4301 2.7 47.8 1.0 FE3 B:SF4301 2.7 47.8 1.0 N B:CYS143 3.4 44.1 1.0 CB B:CYS143 3.5 44.1 1.0 N B:GLY144 3.7 42.9 1.0 S1 B:SF4301 3.9 47.8 1.0 CA B:CYS143 3.9 44.1 1.0 CD B:PRO192 4.1 45.0 1.0 C B:CYS143 4.2 44.1 1.0 N B:GLY142 4.4 44.2 1.0 C B:GLY142 4.4 44.2 1.0 N B:LEU145 4.5 43.0 1.0 SG B:CYS146 4.5 43.7 1.0 CG2 B:VAL141 4.6 44.5 1.0 SG B:CYS140 4.7 48.2 1.0 CA B:GLY144 4.7 42.9 1.0 CA B:GLY142 4.7 44.2 1.0 SG B:CYS191 4.7 47.0 1.0 N B:CYS146 4.9 43.7 1.0 CG B:PRO192 5.0 45.0 1.0

Iron binding site 2 out of 12 in the Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe301 b:47.8 occ:1.00 FE2 B:SF4301 0.0 47.8 1.0 S1 B:SF4301 2.3 47.8 1.0 S3 B:SF4301 2.3 47.8 1.0 S4 B:SF4301 2.3 47.8 1.0 SG B:CYS140 2.5 48.2 1.0 FE1 B:SF4301 2.7 47.8 1.0 FE4 B:SF4301 2.7 47.8 1.0 FE3 B:SF4301 2.7 47.8 1.0 CB B:CYS140 3.5 48.2 1.0 SG B:CYS172 3.6 48.3 1.0 CA B:CYS140 3.8 48.2 1.0 S2 B:SF4301 3.8 47.8 1.0 N B:VAL141 4.0 44.5 1.0 N B:GLY142 4.0 44.2 1.0 CB B:ALA195 4.3 46.0 1.0 C B:CYS140 4.4 48.2 1.0 SG B:CYS146 4.5 43.7 1.0 SG B:CYS191 4.6 47.0 1.0 CA B:GLY142 4.6 44.2 1.0 N B:CYS143 4.8 44.1 1.0 OG B:SER193 4.8 47.7 1.0 SG B:CYS143 4.9 44.1 1.0 CG2 B:ILE135 5.0 48.6 1.0

Iron binding site 3 out of 12 in the Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe301 b:47.8 occ:1.00 FE3 B:SF4301 0.0 47.8 1.0 SG B:CYS191 2.2 47.0 1.0 S2 B:SF4301 2.2 47.8 1.0 S1 B:SF4301 2.3 47.8 1.0 S4 B:SF4301 2.3 47.8 1.0 FE4 B:SF4301 2.7 47.8 1.0 FE2 B:SF4301 2.7 47.8 1.0 FE1 B:SF4301 2.7 47.8 1.0 CB B:CYS191 3.2 47.0 1.0 CA B:CYS191 3.6 47.0 1.0 CD1 B:LEU196 3.7 48.3 1.0 CD B:PRO192 3.9 45.0 1.0 S3 B:SF4301 3.9 47.8 1.0 CB B:ALA195 4.1 46.0 1.0 OG B:SER193 4.2 47.7 1.0 N B:PRO192 4.4 45.0 1.0 C B:CYS191 4.4 47.0 1.0 SG B:CYS143 4.5 44.1 1.0 N B:ALA195 4.8 46.0 1.0 N B:CYS191 4.8 47.0 1.0 SG B:CYS146 4.9 43.7 1.0 N B:SER193 4.9 47.7 1.0 N B:LEU196 5.0 48.3 1.0 CA B:ALA195 5.0 46.0 1.0 CB B:CYS146 5.0 43.7 1.0

Iron binding site 4 out of 12 in the Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe301 b:47.8 occ:1.00 FE4 B:SF4301 0.0 47.8 1.0 SG B:CYS146 2.2 43.7 1.0 S1 B:SF4301 2.3 47.8 1.0 S2 B:SF4301 2.3 47.8 1.0 S3 B:SF4301 2.3 47.8 1.0 FE3 B:SF4301 2.7 47.8 1.0 FE2 B:SF4301 2.7 47.8 1.0 FE1 B:SF4301 2.7 47.8 1.0 CB B:CYS146 2.9 43.7 1.0 N B:CYS146 3.7 43.7 1.0 CD1 B:LEU196 3.8 48.3 1.0 S4 B:SF4301 3.8 47.8 1.0 SG B:CYS172 3.9 48.3 1.0 CA B:CYS146 3.9 43.7 1.0 SG B:CYS143 4.5 44.1 1.0 CD1 B:ILE135 4.5 48.6 1.0 SG B:CYS191 4.6 47.0 1.0 N B:GLY144 4.7 42.9 1.0 N B:LEU145 4.8 43.0 1.0 SG B:CYS140 4.9 48.2 1.0 C B:LEU145 5.0 43.0 1.0 C B:CYS146 5.0 43.7 1.0

Iron binding site 5 out of 12 in the Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe302 b:51.5 occ:1.00 FE1 B:SF4302 0.0 51.5 1.0 S4 B:SF4302 2.2 51.5 1.0 S2 B:SF4302 2.3 51.5 1.0 S3 B:SF4302 2.3 51.5 1.0 SG B:CYS182 2.4 49.7 1.0 CB B:CYS182 2.4 49.7 1.0 FE2 B:SF4302 2.7 51.5 1.0 N B:CYS182 2.7 49.7 1.0 FE4 B:SF4302 2.7 51.5 1.0 FE3 B:SF4302 2.7 51.5 1.0 CA B:CYS182 3.1 49.7 1.0 S1 B:SF4302 3.9 51.5 1.0 C B:SER181 3.9 49.1 1.0 N B:SER183 3.9 48.3 1.0 C B:CYS182 3.9 49.7 1.0 N B:SER181 4.1 49.1 1.0 CA B:SER181 4.3 49.1 1.0 SG B:CYS185 4.3 49.1 1.0 SG B:CYS179 4.5 48.9 1.0 N B:ALA184 4.6 47.4 1.0 CG1 B:ILE180 4.7 48.7 1.0 CD B:PRO151 4.7 50.4 1.0 C B:ILE180 4.8 48.7 1.0 N B:ILE180 4.8 48.7 1.0 SG B:CYS150 4.8 48.3 1.0 O B:SER181 4.9 49.1 1.0

Iron binding site 6 out of 12 in the Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe302 b:51.5 occ:1.00 FE2 B:SF4302 0.0 51.5 1.0 S1 B:SF4302 2.3 51.5 1.0 S3 B:SF4302 2.3 51.5 1.0 S4 B:SF4302 2.3 51.5 1.0 SG B:CYS150 2.6 48.3 1.0 FE1 B:SF4302 2.7 51.5 1.0 FE4 B:SF4302 2.7 51.5 1.0 FE3 B:SF4302 2.7 51.5 1.0 CB B:CYS150 3.4 48.3 1.0 S2 B:SF4302 3.8 51.5 1.0 CA B:CYS150 4.1 48.3 1.0 SG B:CYS182 4.3 49.7 1.0 CB B:ALA156 4.3 47.3 1.0 SG B:CYS179 4.5 48.9 1.0 CD B:PRO151 4.5 50.4 1.0 SG B:CYS185 4.7 49.1 1.0 CG1 B:VAL154 4.7 51.5 1.0 CB B:CYS182 4.8 49.7 1.0 CG1 B:ILE157 4.8 42.7 1.0 CD1 B:ILE157 4.9 42.7 1.0

Iron binding site 7 out of 12 in the Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe302 b:51.5 occ:1.00 FE3 B:SF4302 0.0 51.5 1.0 SG B:CYS185 2.0 49.1 1.0 S2 B:SF4302 2.2 51.5 1.0 S1 B:SF4302 2.3 51.5 1.0 S4 B:SF4302 2.3 51.5 1.0 FE4 B:SF4302 2.7 51.5 1.0 FE2 B:SF4302 2.7 51.5 1.0 FE1 B:SF4302 2.7 51.5 1.0 CB B:CYS185 2.8 49.1 1.0 N B:CYS185 3.7 49.1 1.0 CA B:CYS185 3.9 49.1 1.0 S3 B:SF4302 3.9 51.5 1.0 N B:SER183 4.6 48.3 1.0 SG B:CYS179 4.6 48.9 1.0 CB B:CYS182 4.7 49.7 1.0 N B:CYS182 4.7 49.7 1.0 N B:ALA184 4.8 47.4 1.0 CG B:TYR133 4.8 51.1 1.0 CD2 B:TYR133 4.8 51.1 1.0 C B:ALA184 4.9 47.4 1.0 C B:CYS185 5.0 49.1 1.0

Iron binding site 8 out of 12 in the Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe302 b:51.5 occ:1.00 FE4 B:SF4302 0.0 51.5 1.0 SG B:CYS179 2.1 48.9 1.0 S1 B:SF4302 2.3 51.5 1.0 S2 B:SF4302 2.3 51.5 1.0 S3 B:SF4302 2.3 51.5 1.0 FE3 B:SF4302 2.7 51.5 1.0 FE2 B:SF4302 2.7 51.5 1.0 FE1 B:SF4302 2.7 51.5 1.0 CB B:CYS179 3.4 48.9 1.0 N B:SER181 3.7 49.1 1.0 S4 B:SF4302 3.9 51.5 1.0 CA B:CYS179 3.9 48.9 1.0 N B:ILE180 4.0 48.7 1.0 N B:CYS182 4.1 49.7 1.0 SG B:CYS185 4.1 49.1 1.0 CA B:SER181 4.1 49.1 1.0 C B:CYS179 4.3 48.9 1.0 CD2 B:TYR133 4.4 51.1 1.0 C B:SER181 4.7 49.1 1.0 CE2 B:TYR133 4.7 51.1 1.0 C B:ILE180 4.7 48.7 1.0 SG B:CYS182 4.8 49.7 1.0 CA B:ILE180 5.0 48.7 1.0 CB B:ALA156 5.0 47.3 1.0

Iron binding site 9 out of 12 in the Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe821 b:38.6 occ:1.00 FE1 A:SF4821 0.0 38.6 1.0 SG a:CYS536 2.2 33.1 1.0 S4 A:SF4821 2.2 38.6 1.0 S2 A:SF4821 2.3 38.6 1.0 S3 A:SF4821 2.3 38.6 1.0 FE4 A:SF4821 2.7 38.6 1.0 FE2 A:SF4821 2.7 38.6 1.0 FE3 A:SF4821 2.7 38.6 1.0 CD1 A:ILE670 3.6 33.9 1.0 S1 A:SF4821 3.9 38.6 1.0 CB a:CYS536 4.0 33.1 1.0 SG A:CYS536 4.2 38.9 1.0 CG a:GLU633 4.3 36.1 1.0 SG A:CYS527 4.5 38.4 1.0 CG A:GLU633 4.7 34.6 1.0 CA a:CYS536 4.8 33.1 1.0 CB a:CYS527 4.8 35.2 1.0 SG a:CYS527 4.9 35.2 1.0 CG1 A:ILE670 4.9 33.9 1.0

Iron binding site 10 out of 12 in the Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Cryo-Em Structure of Fmo-Rc Complex From Green Sulfur Bacteria within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe821 b:38.6 occ:1.00 FE2 A:SF4821 0.0 38.6 1.0 SG A:CYS536 2.2 38.9 1.0 S1 A:SF4821 2.3 38.6 1.0 S3 A:SF4821 2.3 38.6 1.0 S4 A:SF4821 2.3 38.6 1.0 FE4 A:SF4821 2.7 38.6 1.0 FE1 A:SF4821 2.7 38.6 1.0 FE3 A:SF4821 2.7 38.6 1.0 CD1 a:ILE670 3.4 34.7 1.0 S2 A:SF4821 3.9 38.6 1.0 CB A:CYS536 4.0 38.9 1.0 SG a:CYS536 4.4 33.1 1.0 SG a:CYS527 4.4 35.2 1.0 CG A:GLU633 4.4 34.6 1.0 CG1 a:ILE670 4.7 34.7 1.0 CA A:CYS536 4.8 38.9 1.0 CB A:CYS527 4.9 38.4 1.0 CG a:GLU633 4.9 36.1 1.0 SG A:CYS527 4.9 38.4 1.0 N A:CYS536 4.9 38.9 1.0

J.H.Chen, H.Wu, C.Xu, X.C.Liu, Z.Huang, S.Chang, W.Wang, G.Han, T.Kuang, J.R.Shen, X.Zhang. Architecture of the Photosynthetic Complex From A Green Sulfur Bacterium. Science V. 370 2020.
ISSN: ESSN 1095-9203
PubMed: 33214250
DOI: 10.1126/SCIENCE.ABB6350