Iron in PDB 6m7l: Complex of Oxya with the X-Domain From Gpa Biosynthesis

The structure of Complex of Oxya with the X-Domain From Gpa Biosynthesis, PDB code: 6m7l was solved by A.Greule, T.Izore, J.Tailhades, M.Peschke, M.Schoppet, I.Ahmed, A.Kulik, M.Adamek, N.Ziemert, J.De Voss, E.Stegmann, M.J.Cryle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.73 / 2.65
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	118.834, 87.344, 95.955, 90.00, 95.77, 90.00
R / Rfree (%)	21.4 / 26.4

The binding sites of Iron atom in the Complex of Oxya with the X-Domain From Gpa Biosynthesis (pdb code 6m7l). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Complex of Oxya with the X-Domain From Gpa Biosynthesis, PDB code: 6m7l:

Iron binding site 1 out of 1 in the Complex of Oxya with the X-Domain From Gpa Biosynthesis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Complex of Oxya with the X-Domain From Gpa Biosynthesis within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe401 b:70.1 occ:1.00 FE A:HEM401 0.0 70.1 1.0 ND A:HEM401 2.0 53.4 1.0 NA A:HEM401 2.0 58.3 1.0 NB A:HEM401 2.1 54.6 1.0 NC A:HEM401 2.1 57.6 1.0 SG A:CYS332 2.8 64.2 1.0 C4D A:HEM401 3.0 62.0 1.0 C1D A:HEM401 3.0 59.7 1.0 C1A A:HEM401 3.0 59.5 1.0 C4A A:HEM401 3.1 54.5 1.0 C4B A:HEM401 3.1 54.5 1.0 C1C A:HEM401 3.1 54.5 1.0 C4C A:HEM401 3.1 55.1 1.0 C1B A:HEM401 3.1 53.5 1.0 CHA A:HEM401 3.4 59.8 1.0 CHD A:HEM401 3.4 61.6 1.0 CHC A:HEM401 3.5 52.6 1.0 CHB A:HEM401 3.5 54.6 1.0 CB A:CYS332 3.6 60.6 1.0 NE2 A:GLN228 3.9 63.9 1.0 CA A:CYS332 4.2 60.0 1.0 C2D A:HEM401 4.2 61.7 1.0 C3D A:HEM401 4.2 66.1 1.0 C2A A:HEM401 4.3 60.0 1.0 C3A A:HEM401 4.3 58.8 1.0 C2C A:HEM401 4.3 57.4 1.0 C3B A:HEM401 4.3 53.6 1.0 C3C A:HEM401 4.3 52.0 1.0 C2B A:HEM401 4.3 50.4 1.0 N A:GLY334 4.7 62.6 1.0 N A:LEU333 4.8 60.3 1.0 C A:CYS332 4.8 64.3 1.0

A.Greule, T.Izore, D.Iftime, J.Tailhades, M.Schoppet, Y.Zhao, M.Peschke, I.Ahmed, A.Kulik, M.Adamek, R.J.A.Goode, R.B.Schittenhelm, J.A.Kaczmarski, C.J.Jackson, N.Ziemert, E.H.Krenske, J.J.De Voss, E.Stegmann, M.J.Cryle. Kistamicin Biosynthesis Reveals the Biosynthetic Requirements For Production of Highly Crosslinked Glycopeptide Antibiotics. Nat Commun V. 10 2613 2019.
ISSN: ESSN 2041-1723
PubMed: 31197182
DOI: 10.1038/S41467-019-10384-W