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Iron in PDB 6mv0: Co-Bound Sperm Whale Myoglobin, Room Temperature Structure Solved By Serial 5DEGREE Oscillation Crystallography

Protein crystallography data

The structure of Co-Bound Sperm Whale Myoglobin, Room Temperature Structure Solved By Serial 5DEGREE Oscillation Crystallography, PDB code: 6mv0 was solved by A.D.Finke, J.L.Wierman, O.Pare-Labrosse, A.Sarrachini, J.Besaw, P.Mehrabi, S.M.Gruner, R.J.D.Miller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.16 / 1.97
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 37.030, 45.900, 82.910, 90.00, 90.00, 90.00
R / Rfree (%) 19.9 / 27.2

Iron Binding Sites:

The binding sites of Iron atom in the Co-Bound Sperm Whale Myoglobin, Room Temperature Structure Solved By Serial 5DEGREE Oscillation Crystallography (pdb code 6mv0). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Co-Bound Sperm Whale Myoglobin, Room Temperature Structure Solved By Serial 5DEGREE Oscillation Crystallography, PDB code: 6mv0:

Iron binding site 1 out of 1 in 6mv0

Go back to Iron Binding Sites List in 6mv0
Iron binding site 1 out of 1 in the Co-Bound Sperm Whale Myoglobin, Room Temperature Structure Solved By Serial 5DEGREE Oscillation Crystallography


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Co-Bound Sperm Whale Myoglobin, Room Temperature Structure Solved By Serial 5DEGREE Oscillation Crystallography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:37.1
occ:1.00
FE A:HEM201 0.0 37.1 1.0
NE2 A:HIS93 1.9 40.2 1.0
NA A:HEM201 2.0 37.2 1.0
ND A:HEM201 2.0 39.5 1.0
NB A:HEM201 2.1 38.5 1.0
C A:CMO202 2.1 38.7 1.0
NC A:HEM201 2.1 34.4 1.0
CE1 A:HIS93 2.9 40.8 1.0
CD2 A:HIS93 3.0 41.2 1.0
C4A A:HEM201 3.0 38.2 1.0
C1A A:HEM201 3.0 43.3 1.0
C4D A:HEM201 3.0 42.9 1.0
C1B A:HEM201 3.0 43.8 1.0
C1D A:HEM201 3.0 44.5 1.0
C4C A:HEM201 3.1 33.4 1.0
C4B A:HEM201 3.1 40.2 1.0
C1C A:HEM201 3.2 37.3 1.0
O A:CMO202 3.2 45.3 1.0
CHB A:HEM201 3.4 32.3 1.0
CHA A:HEM201 3.4 37.2 1.0
CHD A:HEM201 3.4 39.5 1.0
CHC A:HEM201 3.6 38.4 1.0
ND1 A:HIS93 4.0 42.3 1.0
CG A:HIS93 4.1 40.0 1.0
C3A A:HEM201 4.2 43.4 1.0
C3D A:HEM201 4.2 45.6 1.0
C2A A:HEM201 4.2 43.2 1.0
C2D A:HEM201 4.3 48.2 1.0
C2B A:HEM201 4.3 42.3 1.0
C3C A:HEM201 4.3 40.4 1.0
C3B A:HEM201 4.3 38.4 1.0
C2C A:HEM201 4.3 35.5 1.0
CD2 A:HIS97 4.7 45.2 1.0
NE2 A:HIS64 4.8 58.8 1.0

Reference:

J.L.Wierman, O.Pare-Labrosse, A.Sarracini, J.E.Besaw, M.J.Cook, S.Oghbaey, H.Daoud, P.Mehrabi, I.Kriksunov, A.Kuo, D.J.Schuller, S.Smith, O.P.Ernst, D.M.E.Szebenyi, S.M.Gruner, R.J.D.Miller, A.D.Finke. Fixed-Target Serial Oscillation Crystallography at Room Temperature. Iucrj V. 6 305 2019.
ISSN: ESSN 2052-2525
PubMed: 30867928
DOI: 10.1107/S2052252519001453
Page generated: Sun Dec 13 16:44:17 2020

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