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Iron in PDB 6mx5: Crystal Structure of H-Nox Protein From Nostoc Sp.

Protein crystallography data

The structure of Crystal Structure of H-Nox Protein From Nostoc Sp., PDB code: 6mx5 was solved by A.Weichsel, J.A.Kievenaar, W.R.Montfort, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.23 / 2.35
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 65.169, 65.169, 103.264, 90.00, 90.00, 120.00
R / Rfree (%) 20.8 / 26.2

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of H-Nox Protein From Nostoc Sp. (pdb code 6mx5). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of H-Nox Protein From Nostoc Sp., PDB code: 6mx5:

Iron binding site 1 out of 1 in 6mx5

Go back to Iron Binding Sites List in 6mx5
Iron binding site 1 out of 1 in the Crystal Structure of H-Nox Protein From Nostoc Sp.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of H-Nox Protein From Nostoc Sp. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe500

b:48.0
occ:1.00
FE A:HEM500 0.0 48.0 1.0
ND A:HEM500 1.9 45.7 1.0
NA A:HEM500 2.0 42.0 1.0
NB A:HEM500 2.1 52.2 1.0
NC A:HEM500 2.1 49.9 1.0
NE2 A:HIS105 2.2 49.9 1.0
C1D A:HEM500 2.9 45.9 1.0
C4D A:HEM500 2.9 45.2 1.0
C1A A:HEM500 3.0 47.3 1.0
C4A A:HEM500 3.0 47.9 1.0
C4B A:HEM500 3.0 48.5 1.0
C1B A:HEM500 3.1 53.9 1.0
C4C A:HEM500 3.1 48.1 1.0
C1C A:HEM500 3.1 53.5 1.0
CD2 A:HIS105 3.2 46.0 1.0
CE1 A:HIS105 3.2 51.0 1.0
CHA A:HEM500 3.4 50.4 1.0
CHD A:HEM500 3.4 47.7 1.0
CHB A:HEM500 3.4 49.3 1.0
CHC A:HEM500 3.5 53.7 1.0
NE1 A:TRP74 3.5 44.6 1.0
C2A A:HEM500 4.2 45.0 1.0
C2D A:HEM500 4.2 45.9 1.0
C3A A:HEM500 4.2 46.9 1.0
C3D A:HEM500 4.2 49.9 1.0
C3B A:HEM500 4.3 53.3 1.0
C2B A:HEM500 4.3 52.2 1.0
C2C A:HEM500 4.3 46.1 1.0
C3C A:HEM500 4.3 49.0 1.0
CD1 A:TRP74 4.3 45.3 1.0
ND1 A:HIS105 4.3 43.9 1.0
CG A:HIS105 4.4 44.8 1.0
CE2 A:TRP74 4.5 44.0 1.0
CD A:PRO118 4.8 53.6 1.0
CZ2 A:TRP74 4.9 45.6 1.0
CG A:PRO118 5.0 55.5 1.0

Reference:

J.A.Kievenaar, J.T.Croft, J.Li, C.Feng, A.Weichsel, W.R.Montfort. Structure of H-Nox Domain From Cyanobacteria Nostoc Sp To Be Published.
Page generated: Sun Dec 13 16:44:18 2020

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