Iron in PDB 6nin: Rhodobacter Sphaeroides BC1 with Stigmatellin A

All present enzymatic activity of Rhodobacter Sphaeroides BC1 with Stigmatellin A:
1.10.2.2;

The structure of Rhodobacter Sphaeroides BC1 with Stigmatellin A, PDB code: 6nin was solved by D.Xia, F.Zhou, L.Esser, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.91 / 3.60
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	356.661, 145.752, 162.223, 90.00, 104.97, 90.00
R / Rfree (%)	24.9 / 28

The structure of Rhodobacter Sphaeroides BC1 with Stigmatellin A also contains other interesting chemical elements:

Strontium

(Sr)

6 atoms

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30;

Binding sites:

The binding sites of Iron atom in the Rhodobacter Sphaeroides BC1 with Stigmatellin A (pdb code 6nin). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 30 binding sites of Iron where determined in the Rhodobacter Sphaeroides BC1 with Stigmatellin A, PDB code: 6nin:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 30 in the Rhodobacter Sphaeroides BC1 with Stigmatellin A


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Rhodobacter Sphaeroides BC1 with Stigmatellin A within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1001 b:93.3 occ:1.00 FE A:HEM1001 0.0 93.3 1.0 ND A:HEM1001 2.0 0.7 1.0 NE2 A:HIS212 2.0 95.5 1.0 NA A:HEM1001 2.0 94.6 1.0 NC A:HEM1001 2.1 90.7 1.0 NB A:HEM1001 2.1 92.6 1.0 NE2 A:HIS111 2.1 95.3 1.0 CE1 A:HIS212 3.0 96.0 1.0 C4D A:HEM1001 3.0 0.1 1.0 C1D A:HEM1001 3.0 0.2 1.0 CD2 A:HIS212 3.0 95.6 1.0 C4C A:HEM1001 3.0 92.9 1.0 C1A A:HEM1001 3.0 98.3 1.0 CD2 A:HIS111 3.1 94.4 1.0 C4A A:HEM1001 3.1 96.7 1.0 C1B A:HEM1001 3.1 97.0 1.0 C1C A:HEM1001 3.1 89.9 1.0 CE1 A:HIS111 3.1 98.0 1.0 C4B A:HEM1001 3.1 90.2 1.0 HE1 A:HIS212 3.1 0.9 1.0 HD2 A:HIS111 3.2 0.9 1.0 HD2 A:HIS212 3.2 0.4 1.0 HE1 A:HIS111 3.3 0.2 1.0 CHD A:HEM1001 3.4 98.3 1.0 CHA A:HEM1001 3.4 0.8 1.0 CHB A:HEM1001 3.4 96.8 1.0 CHC A:HEM1001 3.5 89.8 1.0 ND1 A:HIS212 4.1 95.6 1.0 CG A:HIS212 4.1 94.3 1.0 ND1 A:HIS111 4.2 98.2 1.0 CG A:HIS111 4.2 97.3 1.0 C3D A:HEM1001 4.2 0.9 1.0 C2D A:HEM1001 4.2 0.7 1.0 C2A A:HEM1001 4.3 98.0 1.0 C3C A:HEM1001 4.3 89.8 1.0 C3A A:HEM1001 4.3 99.6 1.0 C2C A:HEM1001 4.3 86.6 1.0 C2B A:HEM1001 4.3 96.8 1.0 C3B A:HEM1001 4.3 91.2 1.0 HHD A:HEM1001 4.3 0.7 1.0 HHA A:HEM1001 4.4 0.1 1.0 HHB A:HEM1001 4.4 0.9 1.0 HHC A:HEM1001 4.4 0.4 1.0 HD12 A:LEU51 4.5 0.5 1.0 HE2 A:PHE216 4.6 0.7 1.0 HA2 A:GLY48 4.8 0.8 1.0 HD13 A:LEU51 4.8 0.5 1.0 HH22 A:ARG114 4.9 0.3 1.0 HG22 A:THR128 4.9 1.0 1.0 HH21 A:ARG114 4.9 0.3 1.0

Iron binding site 2 out of 30 in the Rhodobacter Sphaeroides BC1 with Stigmatellin A


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Rhodobacter Sphaeroides BC1 with Stigmatellin A within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1002 b:93.7 occ:1.00 FE A:HEM1002 0.0 93.7 1.0 NE2 A:HIS97 2.0 75.3 1.0 NE2 A:HIS198 2.0 81.4 1.0 NB A:HEM1002 2.0 88.4 1.0 ND A:HEM1002 2.0 76.3 1.0 NA A:HEM1002 2.1 82.2 1.0 NC A:HEM1002 2.1 85.8 1.0 CE1 A:HIS97 2.9 74.9 1.0 CE1 A:HIS198 3.0 80.2 1.0 C4A A:HEM1002 3.1 87.2 1.0 C1D A:HEM1002 3.1 77.5 1.0 C1B A:HEM1002 3.1 93.5 1.0 C4B A:HEM1002 3.1 89.8 1.0 CD2 A:HIS198 3.1 78.3 1.0 HE1 A:HIS97 3.1 90.6 1.0 C1C A:HEM1002 3.1 88.3 1.0 CD2 A:HIS97 3.1 76.9 1.0 C4D A:HEM1002 3.1 73.6 1.0 C1A A:HEM1002 3.1 82.0 1.0 C4C A:HEM1002 3.1 83.6 1.0 HE1 A:HIS198 3.1 96.9 1.0 HD2 A:HIS198 3.3 94.6 1.0 HD2 A:HIS97 3.3 93.0 1.0 CHB A:HEM1002 3.4 93.4 1.0 CHC A:HEM1002 3.4 90.3 1.0 CHD A:HEM1002 3.4 79.3 1.0 CHA A:HEM1002 3.5 77.7 1.0 HA3 A:GLY146 3.9 0.0 1.0 ND1 A:HIS97 4.1 76.3 1.0 ND1 A:HIS198 4.1 79.5 1.0 CG A:HIS198 4.2 78.4 1.0 CG A:HIS97 4.2 77.6 1.0 C3A A:HEM1002 4.3 88.8 1.0 C2D A:HEM1002 4.3 76.0 1.0 C2B A:HEM1002 4.3 94.1 1.0 C3B A:HEM1002 4.3 91.1 1.0 C3D A:HEM1002 4.3 73.3 1.0 C2C A:HEM1002 4.3 87.7 1.0 C2A A:HEM1002 4.3 84.8 1.0 C3C A:HEM1002 4.3 87.8 1.0 HA2 A:GLY146 4.3 0.0 1.0 HHB A:HEM1002 4.4 0.8 1.0 HHC A:HEM1002 4.4 1.0 1.0 HHD A:HEM1002 4.4 95.8 1.0 HHA A:HEM1002 4.5 93.8 1.0 HE21 A:GLN58 4.5 0.9 1.0 HA3 A:GLY62 4.5 91.5 1.0 HA2 A:GLY62 4.5 91.5 1.0 HD12 A:LEU149 4.6 0.1 1.0 CA A:GLY146 4.6 82.8 1.0 HE22 A:GLN58 4.9 0.9 1.0 NE2 A:GLN58 5.0 96.9 1.0

Iron binding site 3 out of 30 in the Rhodobacter Sphaeroides BC1 with Stigmatellin A


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Rhodobacter Sphaeroides BC1 with Stigmatellin A within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe1001 b:0.5 occ:1.00 FE B:HEC1001 0.0 0.5 1.0 NE2 B:HIS40 2.0 0.6 1.0 NC B:HEC1001 2.0 0.9 1.0 ND B:HEC1001 2.1 0.4 1.0 NA B:HEC1001 2.1 0.4 1.0 NB B:HEC1001 2.1 0.3 1.0 SD B:MET185 2.1 0.6 1.0 CE1 B:HIS40 3.0 0.1 1.0 CD2 B:HIS40 3.0 0.3 1.0 C4C B:HEC1001 3.0 0.5 1.0 C1D B:HEC1001 3.0 0.9 1.0 C1C B:HEC1001 3.1 0.6 1.0 C4D B:HEC1001 3.1 0.7 1.0 C1A B:HEC1001 3.1 0.5 1.0 C4A B:HEC1001 3.1 0.5 1.0 C4B B:HEC1001 3.1 0.5 1.0 C1B B:HEC1001 3.1 0.7 1.0 HE1 B:HIS40 3.2 0.3 1.0 HG3 B:MET185 3.2 0.4 1.0 HD2 B:HIS40 3.2 0.6 1.0 CG B:MET185 3.3 0.1 1.0 CHD B:HEC1001 3.4 0.2 1.0 CHA B:HEC1001 3.4 0.2 1.0 CHC B:HEC1001 3.5 0.1 1.0 CHB B:HEC1001 3.5 0.4 1.0 HB2 B:MET185 3.6 0.1 1.0 CE B:MET185 3.7 0.8 1.0 HE1 B:MET185 3.8 1.0 1.0 CB B:MET185 4.0 0.8 1.0 HE2 B:MET185 4.0 1.0 1.0 HG2 B:MET185 4.1 0.4 1.0 ND1 B:HIS40 4.1 0.8 1.0 CG B:HIS40 4.2 0.2 1.0 C3C B:HEC1001 4.3 0.3 1.0 C2D B:HEC1001 4.3 0.2 1.0 C2C B:HEC1001 4.3 0.0 1.0 C3D B:HEC1001 4.3 0.3 1.0 C2A B:HEC1001 4.3 0.5 1.0 C3A B:HEC1001 4.3 0.3 1.0 C3B B:HEC1001 4.3 0.6 1.0 C2B B:HEC1001 4.3 0.3 1.0 HE3 B:MET185 4.4 1.0 1.0 HHD B:HEC1001 4.4 0.7 1.0 HHA B:HEC1001 4.4 0.1 1.0 HHC B:HEC1001 4.4 0.0 1.0 HHB B:HEC1001 4.5 0.5 1.0 HB3 B:MET185 4.5 0.1 1.0 HD21 B:LEU100 4.8 0.1 1.0 HD2 B:PRO98 4.8 0.4 1.0 HB1 B:ALA97 4.8 1.0 1.0 HG3 B:PRO188 4.8 0.2 1.0 HD11 B:LEU100 4.9 0.1 1.0 HB2 B:CYS39 5.0 0.7 1.0

Iron binding site 4 out of 30 in the Rhodobacter Sphaeroides BC1 with Stigmatellin A


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Rhodobacter Sphaeroides BC1 with Stigmatellin A within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe1001 b:94.0 occ:1.00 FE1 C:FES1001 0.0 94.0 1.0 S2 C:FES1001 2.2 96.4 1.0 S1 C:FES1001 2.2 96.6 1.0 SG C:CYS129 2.3 86.2 1.0 SG C:CYS149 2.3 92.0 1.0 HB3 C:CYS129 2.7 0.1 1.0 CB C:CYS129 2.9 90.4 1.0 HB2 C:CYS129 3.0 0.1 1.0 FE2 C:FES1001 3.1 91.1 1.0 HB3 C:HIS131 3.1 0.3 1.0 HB3 C:CYS149 3.2 0.8 1.0 HB2 C:CYS134 3.2 0.3 1.0 CB C:CYS149 3.3 95.2 1.0 HB2 C:CYS151 3.5 0.5 1.0 HB2 C:CYS149 3.5 0.8 1.0 H C:LEU132 3.8 0.1 1.0 H C:CYS134 3.8 0.3 1.0 HB2 C:SER154 3.9 0.2 1.0 CB C:HIS131 4.0 96.4 1.0 HG C:SER154 4.1 0.6 1.0 H C:HIS152 4.1 0.1 1.0 HB2 C:HIS131 4.1 0.3 1.0 H C:HIS131 4.1 0.6 1.0 CB C:CYS134 4.2 0.0 1.0 H C:CYS151 4.3 0.5 1.0 CA C:CYS129 4.4 89.1 1.0 N C:CYS134 4.4 88.0 1.0 CB C:CYS151 4.4 0.7 1.0 H C:SER154 4.5 0.8 1.0 H C:GLY133 4.5 0.5 1.0 HB3 C:CYS134 4.6 0.3 1.0 HH C:TYR156 4.6 0.1 1.0 ND1 C:HIS131 4.6 96.5 1.0 CA C:CYS149 4.6 1.0 1.0 OG C:SER154 4.7 90.0 1.0 N C:LEU132 4.7 93.7 1.0 CB C:SER154 4.7 91.3 1.0 O C:CYS134 4.7 94.0 1.0 CA C:CYS134 4.7 97.1 1.0 HG3 C:PRO136 4.7 0.5 1.0 HB3 C:CYS151 4.8 0.5 1.0 HA C:CYS129 4.8 0.6 1.0 HB2 C:ALA167 4.8 0.9 1.0 N C:HIS152 4.8 91.2 1.0 C C:CYS129 4.8 85.6 1.0 CG C:HIS131 4.8 99.1 1.0 N C:HIS131 4.8 85.8 1.0 HB2 C:HIS152 4.9 0.4 1.0 C C:CYS134 4.9 97.3 1.0 ND1 C:HIS152 4.9 94.1 1.0 HA C:CYS149 5.0 0.8 1.0 CA C:HIS131 5.0 91.7 1.0 HE1 C:TYR156 5.0 0.7 1.0 C C:CYS149 5.0 97.1 1.0

Iron binding site 5 out of 30 in the Rhodobacter Sphaeroides BC1 with Stigmatellin A


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Rhodobacter Sphaeroides BC1 with Stigmatellin A within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe1001 b:91.1 occ:1.00 FE2 C:FES1001 0.0 91.1 1.0 ND1 C:HIS131 2.1 96.5 1.0 ND1 C:HIS152 2.1 94.1 1.0 S2 C:FES1001 2.2 96.4 1.0 S1 C:FES1001 2.2 96.6 1.0 HB2 C:HIS152 2.6 0.4 1.0 HB3 C:HIS131 2.8 0.3 1.0 CG C:HIS152 3.0 93.9 1.0 FE1 C:FES1001 3.1 94.0 1.0 CG C:HIS131 3.1 99.1 1.0 CE1 C:HIS131 3.1 98.3 1.0 CB C:HIS152 3.2 93.1 1.0 CE1 C:HIS152 3.2 96.0 1.0 HE1 C:HIS131 3.3 0.6 1.0 CB C:HIS131 3.4 96.4 1.0 H C:HIS152 3.4 0.1 1.0 HE1 C:HIS152 3.5 0.8 1.0 H C:LEU132 3.5 0.1 1.0 HB2 C:CYS151 3.6 0.5 1.0 HB2 C:LEU132 3.6 0.8 1.0 N C:HIS152 3.7 91.2 1.0 HB2 C:HIS131 3.7 0.3 1.0 HB3 C:CYS151 3.8 0.5 1.0 CA C:HIS152 4.0 91.1 1.0 HB3 C:HIS152 4.0 0.4 1.0 HD12 C:LEU132 4.1 0.9 1.0 CB C:CYS151 4.1 0.7 1.0 N C:LEU132 4.1 93.7 1.0 CD2 C:HIS152 4.2 92.3 1.0 NE2 C:HIS131 4.2 98.0 1.0 CD2 C:HIS131 4.2 99.0 1.0 NE2 C:HIS152 4.3 93.3 1.0 HG C:LEU132 4.3 0.1 1.0 C C:CYS151 4.3 89.5 1.0 CB C:LEU132 4.4 96.0 1.0 HG2 C:PRO166 4.5 0.2 1.0 HG C:SER154 4.6 0.6 1.0 CA C:HIS131 4.7 91.7 1.0 SG C:CYS129 4.7 86.2 1.0 C C:HIS152 4.7 91.5 1.0 CG C:LEU132 4.7 97.8 1.0 HA C:HIS152 4.8 1.0 1.0 C C:HIS131 4.8 92.7 1.0 CA C:CYS151 4.8 94.0 1.0 CA C:LEU132 4.8 95.2 1.0 HB2 C:CYS134 4.8 0.3 1.0 SG C:CYS149 4.8 92.0 1.0 CD1 C:LEU132 4.9 97.7 1.0 HB2 C:PRO166 4.9 0.0 1.0 HD2 C:PRO166 4.9 0.6 1.0

Iron binding site 6 out of 30 in the Rhodobacter Sphaeroides BC1 with Stigmatellin A


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Rhodobacter Sphaeroides BC1 with Stigmatellin A within 5.0Å range: probe atom residue distance (Å) B Occ E:Fe1001 b:84.5 occ:1.00 FE E:HEM1001 0.0 84.5 1.0 NE2 E:HIS212 2.0 86.0 1.0 ND E:HEM1001 2.0 93.1 1.0 NA E:HEM1001 2.0 85.3 1.0 NC E:HEM1001 2.1 85.5 1.0 NB E:HEM1001 2.1 87.0 1.0 NE2 E:HIS111 2.1 92.7 1.0 CE1 E:HIS212 2.9 85.3 1.0 C4D E:HEM1001 3.0 94.2 1.0 C1D E:HEM1001 3.0 94.2 1.0 C1A E:HEM1001 3.0 90.6 1.0 C4C E:HEM1001 3.0 88.0 1.0 C4A E:HEM1001 3.0 88.1 1.0 CD2 E:HIS212 3.1 87.5 1.0 HE1 E:HIS212 3.1 0.1 1.0 CD2 E:HIS111 3.1 90.1 1.0 C1B E:HEM1001 3.1 90.7 1.0 C1C E:HEM1001 3.1 84.5 1.0 CE1 E:HIS111 3.1 95.8 1.0 C4B E:HEM1001 3.1 88.0 1.0 HD2 E:HIS111 3.2 0.8 1.0 HD2 E:HIS212 3.3 0.7 1.0 HE1 E:HIS111 3.3 0.7 1.0 CHD E:HEM1001 3.4 93.7 1.0 CHA E:HEM1001 3.4 94.3 1.0 CHB E:HEM1001 3.4 89.7 1.0 CHC E:HEM1001 3.5 86.4 1.0 ND1 E:HIS212 4.0 84.8 1.0 CG E:HIS212 4.1 86.3 1.0 ND1 E:HIS111 4.2 94.7 1.0 C3D E:HEM1001 4.2 96.8 1.0 CG E:HIS111 4.2 91.0 1.0 C2D E:HEM1001 4.2 95.0 1.0 C3A E:HEM1001 4.3 93.1 1.0 C2A E:HEM1001 4.3 92.5 1.0 C3C E:HEM1001 4.3 83.0 1.0 C2C E:HEM1001 4.3 80.8 1.0 C2B E:HEM1001 4.3 90.7 1.0 C3B E:HEM1001 4.3 89.7 1.0 HHD E:HEM1001 4.3 0.1 1.0 HHA E:HEM1001 4.4 0.8 1.0 HHB E:HEM1001 4.4 0.3 1.0 HHC E:HEM1001 4.4 0.3 1.0 HD12 E:LEU51 4.5 0.5 1.0 HE2 E:PHE216 4.6 0.2 1.0 HD13 E:LEU51 4.7 0.5 1.0 HA2 E:GLY48 4.7 0.1 1.0 HG22 E:THR128 4.9 1.0 1.0

Iron binding site 7 out of 30 in the Rhodobacter Sphaeroides BC1 with Stigmatellin A


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Rhodobacter Sphaeroides BC1 with Stigmatellin A within 5.0Å range: probe atom residue distance (Å) B Occ E:Fe1002 b:74.3 occ:1.00 FE E:HEM1002 0.0 74.3 1.0 NE2 E:HIS97 2.0 78.8 1.0 NE2 E:HIS198 2.0 80.1 1.0 NB E:HEM1002 2.0 96.5 1.0 NC E:HEM1002 2.0 92.5 1.0 NA E:HEM1002 2.1 86.5 1.0 ND E:HEM1002 2.1 81.1 1.0 CE1 E:HIS97 2.9 77.6 1.0 CE1 E:HIS198 2.9 78.9 1.0 C4C E:HEM1002 3.0 95.0 1.0 C4B E:HEM1002 3.0 0.2 1.0 HE1 E:HIS97 3.0 93.8 1.0 C1B E:HEM1002 3.1 0.6 1.0 C1C E:HEM1002 3.1 99.1 1.0 C4A E:HEM1002 3.1 93.2 1.0 CD2 E:HIS198 3.1 78.4 1.0 CD2 E:HIS97 3.1 75.8 1.0 C1D E:HEM1002 3.1 85.2 1.0 HE1 E:HIS198 3.1 95.3 1.0 C1A E:HEM1002 3.1 89.2 1.0 C4D E:HEM1002 3.2 80.6 1.0 HD2 E:HIS198 3.3 94.7 1.0 HD2 E:HIS97 3.3 91.6 1.0 CHC E:HEM1002 3.4 0.1 1.0 CHB E:HEM1002 3.4 99.7 1.0 CHD E:HEM1002 3.4 91.8 1.0 CHA E:HEM1002 3.5 85.8 1.0 HA3 E:GLY146 4.0 0.5 1.0 ND1 E:HIS97 4.1 77.0 1.0 ND1 E:HIS198 4.1 78.0 1.0 CG E:HIS198 4.2 77.6 1.0 CG E:HIS97 4.2 75.6 1.0 C3C E:HEM1002 4.3 99.5 1.0 C3B E:HEM1002 4.3 0.3 1.0 C2C E:HEM1002 4.3 98.8 1.0 C2B E:HEM1002 4.3 0.8 1.0 C3A E:HEM1002 4.3 95.0 1.0 C2A E:HEM1002 4.3 93.7 1.0 HD12 E:LEU149 4.3 93.2 1.0 C2D E:HEM1002 4.3 80.6 1.0 HA2 E:GLY146 4.3 0.5 1.0 C3D E:HEM1002 4.3 77.6 1.0 HHC E:HEM1002 4.4 0.6 1.0 HHB E:HEM1002 4.4 0.3 1.0 HHD E:HEM1002 4.4 0.9 1.0 HHA E:HEM1002 4.5 0.7 1.0 HE21 E:GLN58 4.5 0.5 1.0 CA E:GLY146 4.6 85.7 1.0 HA2 E:GLY62 4.7 98.2 1.0 HA3 E:GLY62 4.7 98.2 1.0 HE22 E:GLN58 5.0 0.5 1.0

Iron binding site 8 out of 30 in the Rhodobacter Sphaeroides BC1 with Stigmatellin A


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Rhodobacter Sphaeroides BC1 with Stigmatellin A within 5.0Å range: probe atom residue distance (Å) B Occ F:Fe1001 b:0.8 occ:1.00 FE F:HEC1001 0.0 0.8 1.0 NE2 F:HIS40 2.0 0.7 1.0 NC F:HEC1001 2.0 0.6 1.0 NB F:HEC1001 2.1 0.4 1.0 NA F:HEC1001 2.1 0.3 1.0 ND F:HEC1001 2.1 0.5 1.0 SD F:MET185 2.2 0.1 1.0 CE1 F:HIS40 3.0 0.3 1.0 CD2 F:HIS40 3.0 0.4 1.0 C1C F:HEC1001 3.0 0.8 1.0 C4B F:HEC1001 3.1 0.5 1.0 C4C F:HEC1001 3.1 0.3 1.0 C1A F:HEC1001 3.1 0.3 1.0 C4D F:HEC1001 3.1 0.7 1.0 C1D F:HEC1001 3.1 0.2 1.0 C1B F:HEC1001 3.1 0.8 1.0 C4A F:HEC1001 3.1 0.8 1.0 HD2 F:HIS40 3.1 0.3 1.0 HG3 F:MET185 3.2 0.1 1.0 HE1 F:HIS40 3.2 0.2 1.0 CG F:MET185 3.3 0.1 1.0 CHC F:HEC1001 3.4 0.3 1.0 CHD F:HEC1001 3.4 0.1 1.0 CHA F:HEC1001 3.4 0.1 1.0 CHB F:HEC1001 3.5 0.1 1.0 HB2 F:MET185 3.6 0.6 1.0 CE F:MET185 3.8 0.3 1.0 HE1 F:MET185 3.9 1.0 1.0 CB F:MET185 4.0 0.4 1.0 HG2 F:MET185 4.1 0.1 1.0 ND1 F:HIS40 4.1 0.8 1.0 CG F:HIS40 4.1 0.8 1.0 HE2 F:MET185 4.1 1.0 1.0 C2C F:HEC1001 4.3 0.7 1.0 C3C F:HEC1001 4.3 0.4 1.0 C3B F:HEC1001 4.3 1.0 1.0 C2A F:HEC1001 4.3 0.8 1.0 C3D F:HEC1001 4.3 0.7 1.0 C2D F:HEC1001 4.3 0.3 1.0 C2B F:HEC1001 4.3 0.2 1.0 C3A F:HEC1001 4.3 0.0 1.0 HHC F:HEC1001 4.4 0.6 1.0 HHD F:HEC1001 4.4 0.2 1.0 HHA F:HEC1001 4.4 0.4 1.0 HE3 F:MET185 4.4 1.0 1.0 HHB F:HEC1001 4.5 0.6 1.0 HB3 F:MET185 4.6 0.6 1.0 HB2 F:CYS39 4.9 0.8 1.0 HB1 F:ALA97 4.9 0.4 1.0 HD2 F:PRO98 4.9 0.2 1.0 HD11 F:LEU100 5.0 0.0 1.0 HD21 F:LEU100 5.0 0.4 1.0 HG3 F:PRO188 5.0 0.7 1.0

Iron binding site 9 out of 30 in the Rhodobacter Sphaeroides BC1 with Stigmatellin A


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Rhodobacter Sphaeroides BC1 with Stigmatellin A within 5.0Å range: probe atom residue distance (Å) B Occ G:Fe1001 b:88.1 occ:1.00 FE1 G:FES1001 0.0 88.1 1.0 S2 G:FES1001 2.2 88.2 1.0 S1 G:FES1001 2.2 85.8 1.0 SG G:CYS149 2.3 90.7 1.0 SG G:CYS129 2.3 82.6 1.0 HB3 G:CYS129 2.7 0.5 1.0 CB G:CYS129 2.8 93.2 1.0 HB2 G:CYS129 3.0 0.5 1.0 FE2 G:FES1001 3.1 87.8 1.0 HB2 G:CYS134 3.1 0.7 1.0 HB3 G:CYS149 3.2 0.3 1.0 HB3 G:HIS131 3.2 0.8 1.0 CB G:CYS149 3.3 98.0 1.0 HB2 G:CYS151 3.4 0.9 1.0 HB2 G:CYS149 3.5 0.3 1.0 H G:CYS134 3.8 0.9 1.0 H G:LEU132 3.8 0.6 1.0 HB2 G:SER154 4.0 0.7 1.0 CB G:CYS134 4.1 98.4 1.0 CB G:HIS131 4.1 95.9 1.0 H G:HIS152 4.1 0.2 1.0 H G:HIS131 4.2 0.6 1.0 HB2 G:HIS131 4.2 0.8 1.0 H G:CYS151 4.3 0.5 1.0 CA G:CYS129 4.3 95.8 1.0 CB G:CYS151 4.3 0.1 1.0 N G:CYS134 4.4 92.7 1.0 HG G:SER154 4.4 0.1 1.0 H G:GLY133 4.5 0.5 1.0 HB3 G:CYS134 4.5 0.7 1.0 HH G:TYR156 4.6 0.4 1.0 ND1 G:HIS131 4.6 95.0 1.0 N G:LEU132 4.6 0.3 1.0 CA G:CYS149 4.6 0.6 1.0 CA G:CYS134 4.6 98.2 1.0 HB3 G:CYS151 4.7 0.9 1.0 H G:SER154 4.7 0.0 1.0 O G:CYS134 4.7 0.8 1.0 HA G:CYS129 4.7 0.6 1.0 OG G:SER154 4.8 0.2 1.0 C G:CYS129 4.8 91.7 1.0 HG3 G:PRO136 4.8 0.8 1.0 CB G:SER154 4.8 0.0 1.0 C G:CYS134 4.9 0.9 1.0 N G:HIS152 4.9 94.6 1.0 CG G:HIS131 4.9 96.3 1.0 HB2 G:ALA167 4.9 0.8 1.0 N G:HIS131 4.9 92.5 1.0 ND1 G:HIS152 4.9 90.8 1.0 HA G:CYS149 4.9 0.5 1.0 H G:CYS129 4.9 0.4 1.0 N G:GLY133 5.0 92.3 1.0 HB2 G:HIS152 5.0 0.4 1.0 C G:CYS149 5.0 96.3 1.0

Iron binding site 10 out of 30 in the Rhodobacter Sphaeroides BC1 with Stigmatellin A


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Rhodobacter Sphaeroides BC1 with Stigmatellin A within 5.0Å range: probe atom residue distance (Å) B Occ G:Fe1001 b:87.8 occ:1.00 FE2 G:FES1001 0.0 87.8 1.0 ND1 G:HIS152 2.1 90.8 1.0 ND1 G:HIS131 2.1 95.0 1.0 S2 G:FES1001 2.2 88.2 1.0 S1 G:FES1001 2.2 85.8 1.0 HB2 G:HIS152 2.5 0.4 1.0 HB3 G:HIS131 2.9 0.8 1.0 CG G:HIS152 3.0 91.2 1.0 FE1 G:FES1001 3.1 88.1 1.0 CE1 G:HIS131 3.1 96.3 1.0 CB G:HIS152 3.1 94.8 1.0 CG G:HIS131 3.1 96.3 1.0 CE1 G:HIS152 3.2 92.3 1.0 HE1 G:HIS131 3.3 0.2 1.0 H G:HIS152 3.3 0.2 1.0 CB G:HIS131 3.5 95.9 1.0 HE1 G:HIS152 3.5 0.4 1.0 HB2 G:CYS151 3.5 0.9 1.0 N G:HIS152 3.5 94.6 1.0 H G:LEU132 3.8 0.6 1.0 HB2 G:HIS131 3.8 0.8 1.0 HB2 G:LEU132 3.8 0.1 1.0 HB3 G:CYS151 3.8 0.9 1.0 CA G:HIS152 3.9 95.6 1.0 HB3 G:HIS152 3.9 0.4 1.0 CB G:CYS151 4.1 0.1 1.0 CD2 G:HIS152 4.2 89.9 1.0 NE2 G:HIS131 4.2 95.6 1.0 C G:CYS151 4.2 90.5 1.0 HG2 G:PRO166 4.3 0.3 1.0 NE2 G:HIS152 4.3 91.3 1.0 CD2 G:HIS131 4.3 95.5 1.0 HG G:SER154 4.3 0.1 1.0 N G:LEU132 4.3 0.3 1.0 HG G:LEU132 4.4 0.2 1.0 HD12 G:LEU132 4.4 0.9 1.0 C G:HIS152 4.6 96.5 1.0 HD2 G:PRO166 4.6 0.2 1.0 CB G:LEU132 4.6 0.2 1.0 SG G:CYS129 4.6 82.6 1.0 HA G:HIS152 4.7 0.4 1.0 CA G:CYS151 4.7 93.1 1.0 CA G:HIS131 4.8 95.4 1.0 HB2 G:PRO166 4.8 0.5 1.0 SG G:CYS149 4.8 90.7 1.0 CG G:LEU132 4.9 99.6 1.0 HD11 G:LEU132 4.9 0.9 1.0 H G:GLY153 4.9 0.5 1.0 O G:CYS151 4.9 87.8 1.0 CD1 G:LEU132 5.0 98.5 1.0 HB2 G:CYS134 5.0 0.7 1.0 H G:CYS151 5.0 0.5 1.0 HD2 G:HIS152 5.0 0.6 1.0 C G:HIS131 5.0 0.1 1.0

L.Esser, F.Zhou, C.A.Yu, D.Xia. Crystal Structure of Bacterial CYTOCHROMEBC1IN Complex with Azoxystrobin Reveals A Conformational Switch of the Rieske Iron-Sulfur Protein Subunit. J.Biol.Chem. V. 294 12007 2019.
ISSN: ESSN 1083-351X
PubMed: 31182483
DOI: 10.1074/JBC.RA119.008381