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Iron in PDB 6nsi: Crystal Structure of Fe(III)-Bound Ytga From Chlamydia Trachomatis

Protein crystallography data

The structure of Crystal Structure of Fe(III)-Bound Ytga From Chlamydia Trachomatis, PDB code: 6nsi was solved by Z.Luo, R.Campbell, S.L.Begg, B.Kobe, C.A.Mcdevitt, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.08 / 2.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 47.841, 61.072, 105.500, 90.00, 96.95, 90.00
R / Rfree (%) 18 / 22.5

Other elements in 6nsi:

The structure of Crystal Structure of Fe(III)-Bound Ytga From Chlamydia Trachomatis also contains other interesting chemical elements:

Calcium (Ca) 1 atom
Sodium (Na) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Fe(III)-Bound Ytga From Chlamydia Trachomatis (pdb code 6nsi). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Fe(III)-Bound Ytga From Chlamydia Trachomatis, PDB code: 6nsi:

Iron binding site 1 out of 1 in 6nsi

Go back to Iron Binding Sites List in 6nsi
Iron binding site 1 out of 1 in the Crystal Structure of Fe(III)-Bound Ytga From Chlamydia Trachomatis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Fe(III)-Bound Ytga From Chlamydia Trachomatis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe401

b:24.1
occ:1.00
OD1 A:ASP299 2.0 23.9 1.0
NE2 A:HIS75 2.1 28.6 1.0
NE2 A:HIS141 2.2 18.4 1.0
NE2 A:HIS207 2.2 20.3 1.0
OD2 A:ASP299 2.4 26.0 1.0
CG A:ASP299 2.5 29.8 1.0
CE1 A:HIS75 3.0 30.3 1.0
CD2 A:HIS75 3.1 32.4 1.0
CD2 A:HIS141 3.1 21.0 1.0
CD2 A:HIS207 3.2 20.8 1.0
CE1 A:HIS141 3.2 21.4 1.0
CE1 A:HIS207 3.2 23.8 1.0
O A:LEU239 3.5 29.3 1.0
CB A:ASP299 4.1 27.3 1.0
ND1 A:HIS75 4.1 30.7 1.0
CG A:HIS75 4.2 31.6 1.0
CG A:HIS141 4.3 20.3 1.0
CB A:ALA209 4.3 20.9 1.0
ND1 A:HIS141 4.3 22.5 1.0
ND1 A:HIS207 4.4 26.0 1.0
CG A:HIS207 4.4 24.4 1.0
C A:LEU239 4.7 29.7 1.0
CD A:PRO241 4.7 37.6 1.0
CA A:ASP299 4.8 27.0 1.0
O A:HOH540 4.9 43.2 1.0
CA A:ALA209 5.0 21.0 1.0

Reference:

Z.Luo, S.L.Neville, R.Campbell, J.R.Morey, S.Menon, M.Thomas, B.A.Eijkelkamp, M.P.Ween, W.M.Huston, B.Kobe, C.A.Mcdevitt. The Structure and Metal Binding Properties Ofchlamydia Trachomatisytga. J.Bacteriol. 2019.
ISSN: ESSN 1098-5530
PubMed: 31611288
DOI: 10.1128/JB.00580-19
Page generated: Sun Dec 13 16:46:38 2020

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