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Iron in PDB 6o0a: Crystal Structure of Flavohemoglobin From Malassezia Yamatoensis with Bound Fad and Heme Determined By Iron Sad Phasing

Protein crystallography data

The structure of Crystal Structure of Flavohemoglobin From Malassezia Yamatoensis with Bound Fad and Heme Determined By Iron Sad Phasing, PDB code: 6o0a was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.26 / 1.70
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 91.010, 110.600, 39.010, 90.00, 90.00, 90.00
R / Rfree (%) 16.7 / 19.8

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Flavohemoglobin From Malassezia Yamatoensis with Bound Fad and Heme Determined By Iron Sad Phasing (pdb code 6o0a). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Flavohemoglobin From Malassezia Yamatoensis with Bound Fad and Heme Determined By Iron Sad Phasing, PDB code: 6o0a:

Iron binding site 1 out of 1 in 6o0a

Go back to Iron Binding Sites List in 6o0a
Iron binding site 1 out of 1 in the Crystal Structure of Flavohemoglobin From Malassezia Yamatoensis with Bound Fad and Heme Determined By Iron Sad Phasing


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Flavohemoglobin From Malassezia Yamatoensis with Bound Fad and Heme Determined By Iron Sad Phasing within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe402

b:18.4
occ:1.00
FE A:HEM402 0.0 18.4 1.0
NA A:HEM402 2.0 15.7 1.0
NB A:HEM402 2.1 16.6 1.0
NC A:HEM402 2.1 13.7 1.0
ND A:HEM402 2.1 14.7 1.0
NE2 A:HIS88 2.2 17.9 1.0
C4A A:HEM402 3.1 23.2 1.0
C1C A:HEM402 3.1 18.0 1.0
C4B A:HEM402 3.1 15.3 1.0
C1A A:HEM402 3.1 15.7 1.0
C1B A:HEM402 3.1 18.2 1.0
C1D A:HEM402 3.1 12.4 1.0
C4D A:HEM402 3.1 15.3 1.0
C4C A:HEM402 3.1 14.2 1.0
CE1 A:HIS88 3.1 15.9 1.0
CD2 A:HIS88 3.3 15.5 1.0
CHC A:HEM402 3.4 18.1 1.0
CHB A:HEM402 3.4 19.8 1.0
CHA A:HEM402 3.5 16.8 1.0
CHD A:HEM402 3.5 13.2 1.0
CD1 A:LEU58 3.7 29.1 1.0
CG A:LEU58 4.2 30.6 1.0
ND1 A:HIS88 4.3 16.6 1.0
C3A A:HEM402 4.3 21.8 1.0
C2A A:HEM402 4.3 17.4 1.0
C2C A:HEM402 4.3 14.3 1.0
C2B A:HEM402 4.3 16.6 1.0
C3B A:HEM402 4.3 20.1 1.0
C2D A:HEM402 4.3 17.9 1.0
C3C A:HEM402 4.3 14.4 1.0
C3D A:HEM402 4.3 17.9 1.0
CG A:HIS88 4.4 14.9 1.0
O A:HOH649 4.7 18.1 0.5
CG1 A:VAL84 4.8 15.6 1.0
CB A:LEU58 4.9 28.3 1.0

Reference:

M.J.Bolejack, D.Fox Iii, D.D.Lorimer, P.S.Horanyi, T.E.Edwards. Crystal Structure of Flavohemoglobin From Malassezia Yamatoensis with Bound Fad and Heme Determined By Iron Sad Phasing To Be Published.
Page generated: Wed Aug 7 04:03:12 2024

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