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Iron in PDB 6om5: Structure of A Haemophore From Haemophilus Haemolyticus

Protein crystallography data

The structure of Structure of A Haemophore From Haemophilus Haemolyticus, PDB code: 6om5 was solved by M.Torrado, J.L.Walshe, J.P.Mackay, J.M.Guss, D.A.Gell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.49 / 1.60
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 91.043, 91.043, 97.484, 90.00, 90.00, 120.00
R / Rfree (%) 17.1 / 18.4

Other elements in 6om5:

The structure of Structure of A Haemophore From Haemophilus Haemolyticus also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Structure of A Haemophore From Haemophilus Haemolyticus (pdb code 6om5). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Structure of A Haemophore From Haemophilus Haemolyticus, PDB code: 6om5:

Iron binding site 1 out of 1 in 6om5

Go back to Iron Binding Sites List in 6om5
Iron binding site 1 out of 1 in the Structure of A Haemophore From Haemophilus Haemolyticus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of A Haemophore From Haemophilus Haemolyticus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe301

b:25.3
occ:1.00
FE A:HEM301 0.0 25.3 1.0
ND A:HEM301 1.9 25.4 1.0
NA A:HEM301 2.0 25.9 1.0
NE2 A:HIS119 2.0 23.0 1.0
NB A:HEM301 2.1 26.8 1.0
NC A:HEM301 2.1 23.4 1.0
CL A:CL306 2.5 30.0 1.0
C1D A:HEM301 3.0 24.3 1.0
C4D A:HEM301 3.0 26.9 1.0
C1A A:HEM301 3.0 28.1 1.0
C4A A:HEM301 3.0 30.5 1.0
CD2 A:HIS119 3.0 23.5 1.0
CE1 A:HIS119 3.0 23.0 1.0
C4B A:HEM301 3.0 26.7 1.0
C1B A:HEM301 3.1 28.7 1.0
C4C A:HEM301 3.1 23.3 1.0
C1C A:HEM301 3.1 23.7 1.0
CHA A:HEM301 3.4 26.2 1.0
CHD A:HEM301 3.4 24.5 1.0
CHB A:HEM301 3.4 30.7 1.0
CHC A:HEM301 3.5 25.8 1.0
ND1 A:HIS119 4.1 23.3 1.0
CG A:HIS119 4.2 23.3 1.0
C3A A:HEM301 4.2 32.4 1.0
C3D A:HEM301 4.2 26.4 1.0
C2A A:HEM301 4.2 30.6 1.0
C2D A:HEM301 4.2 26.8 1.0
C2B A:HEM301 4.3 29.5 1.0
C3B A:HEM301 4.3 28.7 1.0
C3C A:HEM301 4.3 24.4 1.0
C2C A:HEM301 4.3 24.5 1.0
NE2 A:GLN74 4.5 26.4 1.0
NH1 A:ARG82 4.5 33.8 1.0
CG A:GLN74 4.9 23.8 1.0

Reference:

R.D.Latham, M.Torrado, B.Atto, J.L.Walshe, R.Wilson, J.M.Guss, J.P.Mackay, S.Tristram, D.A.Gell. A Heme-Binding Protein Produced By Haemophilus Haemolyticus Inhibits Non-Typeable Haemophilus Influenzae. Mol.Microbiol. 2019.
ISSN: ESSN 1365-2958
PubMed: 31742788
DOI: 10.1111/MMI.14426
Page generated: Sun Dec 13 16:47:39 2020

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