Iron in PDB 6qrz: Crystal Structure of R2-Like Ligand-Binding Oxidase From Sulfolobus Acidocaldarius Solved By 3D Micro-Crystal Electron Diffraction

Enzymatic activity of Crystal Structure of R2-Like Ligand-Binding Oxidase From Sulfolobus Acidocaldarius Solved By 3D Micro-Crystal Electron Diffraction

All present enzymatic activity of Crystal Structure of R2-Like Ligand-Binding Oxidase From Sulfolobus Acidocaldarius Solved By 3D Micro-Crystal Electron Diffraction:
1.17.4.1;

Other elements in 6qrz:

The structure of Crystal Structure of R2-Like Ligand-Binding Oxidase From Sulfolobus Acidocaldarius Solved By 3D Micro-Crystal Electron Diffraction also contains other interesting chemical elements:

Manganese (Mn) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of R2-Like Ligand-Binding Oxidase From Sulfolobus Acidocaldarius Solved By 3D Micro-Crystal Electron Diffraction (pdb code 6qrz). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of R2-Like Ligand-Binding Oxidase From Sulfolobus Acidocaldarius Solved By 3D Micro-Crystal Electron Diffraction, PDB code: 6qrz:

Iron binding site 1 out of 1 in 6qrz

Go back to Iron Binding Sites List in 6qrz
Iron binding site 1 out of 1 in the Crystal Structure of R2-Like Ligand-Binding Oxidase From Sulfolobus Acidocaldarius Solved By 3D Micro-Crystal Electron Diffraction


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of R2-Like Ligand-Binding Oxidase From Sulfolobus Acidocaldarius Solved By 3D Micro-Crystal Electron Diffraction within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe402

b:38.0
occ:1.00
 OE2 A:GLU112 2.0 40.8 1.0
OE2 A:GLU214 2.1 55.0 1.0
ND1 A:HIS217 2.2 41.4 1.0
CD A:GLU214 2.7 53.0 1.0
CG A:HIS217 3.0 40.9 1.0
OE1 A:GLU214 3.0 43.0 1.0
OE2 A:GLU179 3.0 34.8 1.0
CD A:GLU179 3.1 45.4 1.0
CB A:HIS217 3.1 41.1 1.0
CD A:GLU112 3.2 40.5 1.0
CE1 A:HIS217 3.3 38.9 1.0
MN A:MN3401 3.4 51.4 1.0
OE1 A:GLU179 3.5 43.4 1.0
CG A:GLU179 3.6 39.7 1.0
OE1 A:GLU112 3.7 41.0 1.0
CG A:GLU214 3.8 44.8 1.0
CE1 A:PHE108 4.0 48.2 1.0
CD2 A:HIS217 4.1 39.3 1.0
NE2 A:HIS217 4.2 40.3 1.0
CB A:GLU179 4.4 36.9 1.0
CG A:GLU112 4.4 38.6 1.0
CZ A:PHE108 4.5 48.8 1.0
CA A:GLU214 4.5 37.2 1.0
CA A:HIS217 4.6 39.9 1.0
CB A:GLU214 4.7 39.0 1.0
CD1 A:PHE108 4.9 47.2 1.0

Reference:

H.Xu, H.Lebrette, M.T.B.Clabbers, J.Zhao, J.J.Griese, X.Zou, M.Hogbom. Solving A New R2LOX Protein Structure By Microcrystal Electron Diffraction. Sci Adv V. 5 X4621 2019.
ISSN: ESSN 2375-2548
PubMed: 31457106
DOI: 10.1126/SCIADV.AAX4621
Page generated: Sun Dec 13 16:58:07 2020

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