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Iron in PDB 6r6n: Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32M/C101M Mutant

Protein crystallography data

The structure of Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32M/C101M Mutant, PDB code: 6r6n was solved by M.Akram, T.Barends, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.66 / 2.00
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 44.680, 130.430, 45.660, 90.00, 90.00, 90.00
R / Rfree (%) 20 / 23.6

Iron Binding Sites:

The binding sites of Iron atom in the Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32M/C101M Mutant (pdb code 6r6n). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32M/C101M Mutant, PDB code: 6r6n:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 6r6n

Go back to Iron Binding Sites List in 6r6n
Iron binding site 1 out of 2 in the Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32M/C101M Mutant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32M/C101M Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe200

b:35.6
occ:1.00
FE A:HEC200 0.0 35.6 1.0
NA A:HEC200 2.0 32.6 1.0
NB A:HEC200 2.1 34.9 1.0
NC A:HEC200 2.1 31.1 1.0
ND A:HEC200 2.1 35.5 1.0
NE2 A:HIS124 2.2 36.3 1.0
SD A:MET32 2.5 41.7 1.0
C4A A:HEC200 3.0 36.6 1.0
C1A A:HEC200 3.0 39.9 1.0
C1B A:HEC200 3.0 36.9 1.0
C4C A:HEC200 3.1 35.2 1.0
CD2 A:HIS124 3.1 30.0 1.0
C4D A:HEC200 3.1 34.0 1.0
C1D A:HEC200 3.1 28.4 1.0
C1C A:HEC200 3.1 34.4 1.0
C4B A:HEC200 3.1 35.7 1.0
CE1 A:HIS124 3.3 38.8 1.0
CG A:MET32 3.3 38.4 1.0
CHB A:HEC200 3.4 33.5 1.0
CE A:MET32 3.4 42.3 1.0
CHA A:HEC200 3.4 40.1 1.0
CHD A:HEC200 3.4 30.9 1.0
CHC A:HEC200 3.5 38.1 1.0
C3A A:HEC200 4.2 33.5 1.0
C2A A:HEC200 4.2 43.7 1.0
CG A:HIS124 4.3 32.5 1.0
C2B A:HEC200 4.3 37.2 1.0
C2C A:HEC200 4.3 34.3 1.0
C3C A:HEC200 4.3 36.1 1.0
CB A:MET32 4.3 41.8 1.0
C3B A:HEC200 4.3 30.6 1.0
C3D A:HEC200 4.3 39.0 1.0
ND1 A:HIS124 4.3 33.3 1.0
C2D A:HEC200 4.3 41.8 1.0

Iron binding site 2 out of 2 in 6r6n

Go back to Iron Binding Sites List in 6r6n
Iron binding site 2 out of 2 in the Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32M/C101M Mutant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32M/C101M Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe200

b:26.2
occ:1.00
FE B:HEC200 0.0 26.2 1.0
NB B:HEC200 1.9 21.6 1.0
ND B:HEC200 2.0 28.7 1.0
NC B:HEC200 2.1 19.9 1.0
NA B:HEC200 2.1 19.8 1.0
NE2 B:HIS58 2.2 25.3 1.0
SD B:MET101 2.5 24.6 1.0
C4D B:HEC200 3.0 29.2 1.0
C4B B:HEC200 3.0 28.2 1.0
C1B B:HEC200 3.0 22.8 1.0
C1D B:HEC200 3.0 30.1 1.0
C1C B:HEC200 3.1 21.4 1.0
CD2 B:HIS58 3.1 23.9 1.0
C1A B:HEC200 3.1 20.7 1.0
C4C B:HEC200 3.1 21.7 1.0
C4A B:HEC200 3.1 20.6 1.0
CE1 B:HIS58 3.3 25.6 1.0
CHA B:HEC200 3.4 28.5 1.0
CHC B:HEC200 3.4 24.6 1.0
CHD B:HEC200 3.4 25.8 1.0
CHB B:HEC200 3.5 21.3 1.0
CE B:MET101 3.6 23.6 1.0
CG B:MET101 3.7 28.5 1.0
CB B:MET101 4.0 29.8 1.0
C3D B:HEC200 4.2 27.2 1.0
C2B B:HEC200 4.2 21.9 1.0
C3B B:HEC200 4.2 27.1 1.0
C2D B:HEC200 4.2 31.5 1.0
CG B:HIS58 4.3 26.1 1.0
C2C B:HEC200 4.3 26.4 1.0
C3C B:HEC200 4.3 24.7 1.0
C2A B:HEC200 4.3 21.6 1.0
ND1 B:HIS58 4.3 26.4 1.0
C3A B:HEC200 4.3 23.4 1.0
CA B:MET101 4.6 25.9 1.0

Reference:

M.Akram, J.Reimann, A.Dietl, A.Menzel, W.Versantvoort, B.Kartal, M.S.M.Jetten, T.R.M.Barends. A Nitric Oxide-Binding Heterodimeric Cytochromeccomplex From the Anammox Bacteriumkuenenia Stuttgartiensisbinds to Hydrazine Synthase. J.Biol.Chem. V. 294 16712 2019.
ISSN: ESSN 1083-351X
PubMed: 31548310
DOI: 10.1074/JBC.RA119.008788
Page generated: Wed Aug 7 08:39:54 2024

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