Iron in PDB 6r6o: Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32G/Wt Mutant

Protein crystallography data

The structure of Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32G/Wt Mutant, PDB code: 6r6o was solved by M.Akram, T.Barends, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.85 / 1.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 44.240, 131.450, 45.330, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 20.6

Other elements in 6r6o:

The structure of Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32G/Wt Mutant also contains other interesting chemical elements:

Potassium (K) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32G/Wt Mutant (pdb code 6r6o). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32G/Wt Mutant, PDB code: 6r6o:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 6r6o

Go back to Iron Binding Sites List in 6r6o
Iron binding site 1 out of 2 in the Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32G/Wt Mutant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32G/Wt Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe200

b:29.3
occ:1.00
FE A:HEC200 0.0 29.3 1.0
NA A:HEC200 2.0 30.5 1.0
NB A:HEC200 2.1 25.6 1.0
ND A:HEC200 2.1 28.0 1.0
NC A:HEC200 2.1 19.9 1.0
O A:HOH337 2.2 33.2 1.0
NE2 A:HIS124 2.2 29.6 1.0
C1A A:HEC200 3.0 38.9 1.0
C4D A:HEC200 3.0 33.2 1.0
C4A A:HEC200 3.1 35.9 1.0
C1B A:HEC200 3.1 32.6 1.0
C4B A:HEC200 3.1 28.1 1.0
C1D A:HEC200 3.1 27.8 1.0
C1C A:HEC200 3.1 26.9 1.0
C4C A:HEC200 3.1 25.8 1.0
CD2 A:HIS124 3.1 29.4 1.0
CE1 A:HIS124 3.3 33.7 1.0
CHA A:HEC200 3.4 37.5 1.0
CHB A:HEC200 3.4 31.7 1.0
CHC A:HEC200 3.5 23.8 1.0
CHD A:HEC200 3.5 26.9 1.0
C2A A:HEC200 4.3 38.1 1.0
C3A A:HEC200 4.3 36.1 1.0
C3D A:HEC200 4.3 34.7 1.0
C2B A:HEC200 4.3 28.5 1.0
C3B A:HEC200 4.3 25.4 1.0
CG A:HIS124 4.3 31.7 1.0
C2D A:HEC200 4.3 34.0 1.0
C2C A:HEC200 4.3 25.4 1.0
C3C A:HEC200 4.4 20.7 1.0
ND1 A:HIS124 4.4 30.7 1.0
NE2 A:GLN28 4.4 42.5 1.0
CA A:GLY32 4.6 41.4 1.0
CE A:MET35 4.8 31.3 1.0
O A:HOH320 4.9 41.7 1.0

Iron binding site 2 out of 2 in 6r6o

Go back to Iron Binding Sites List in 6r6o
Iron binding site 2 out of 2 in the Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32G/Wt Mutant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Recombinantly Produced KUSTA0087/KUSTA0088 Complex, C32G/Wt Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe200

b:23.2
occ:1.00
FE B:HEC200 0.0 23.2 1.0
NB B:HEC200 2.0 21.5 1.0
NA B:HEC200 2.1 23.4 1.0
ND B:HEC200 2.1 21.1 1.0
NC B:HEC200 2.1 24.8 1.0
NE2 B:HIS58 2.2 28.0 1.0
SG B:CYS101 2.5 24.0 1.0
C1B B:HEC200 3.0 22.6 1.0
CD2 B:HIS58 3.0 27.1 1.0
C4A B:HEC200 3.1 22.6 1.0
C1D B:HEC200 3.1 26.7 1.0
C4B B:HEC200 3.1 27.7 1.0
C4D B:HEC200 3.1 23.1 1.0
C4C B:HEC200 3.1 25.2 1.0
C1A B:HEC200 3.1 22.5 1.0
C1C B:HEC200 3.1 24.1 1.0
CE1 B:HIS58 3.2 23.9 1.0
CHB B:HEC200 3.4 21.4 1.0
CHD B:HEC200 3.4 21.7 1.0
CHC B:HEC200 3.4 27.1 1.0
CB B:CYS101 3.5 22.5 1.0
CHA B:HEC200 3.5 20.8 1.0
CG B:HIS58 4.2 23.9 1.0
CA B:CYS101 4.2 25.1 1.0
C2B B:HEC200 4.3 22.1 1.0
C3B B:HEC200 4.3 19.7 1.0
C3A B:HEC200 4.3 29.1 1.0
ND1 B:HIS58 4.3 22.3 1.0
C2D B:HEC200 4.3 26.7 1.0
C2A B:HEC200 4.3 25.4 1.0
C3D B:HEC200 4.3 22.5 1.0
C3C B:HEC200 4.3 25.1 1.0
C2C B:HEC200 4.4 23.0 1.0
NE2 B:HIS93 4.4 23.6 1.0
O B:HOH373 4.7 34.5 1.0

Reference:

M.Akram, J.Reimann, A.Dietl, A.Menzel, W.Versantvoort, B.Kartal, M.S.M.Jetten, T.R.M.Barends. A Nitric Oxide-Binding Heterodimeric Cytochromeccomplex From the Anammox Bacteriumkuenenia Stuttgartiensisbinds to Hydrazine Synthase. J.Biol.Chem. V. 294 16712 2019.
ISSN: ESSN 1083-351X
PubMed: 31548310
DOI: 10.1074/JBC.RA119.008788
Page generated: Sun Dec 13 16:58:42 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy