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Iron in PDB 6rsj: Cytochrome C Co-Crystallized with 20 Eq. Sulfonato-Calix[8]Arene and Soaked with 25 Eq. Spermine - Structure I

Protein crystallography data

The structure of Cytochrome C Co-Crystallized with 20 Eq. Sulfonato-Calix[8]Arene and Soaked with 25 Eq. Spermine - Structure I, PDB code: 6rsj was solved by S.Engilberge, P.B.Crowley, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 54.99 / 2.27
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 101.452, 101.452, 85.612, 90.00, 90.00, 90.00
R / Rfree (%) 19.3 / 21.2

Iron Binding Sites:

The binding sites of Iron atom in the Cytochrome C Co-Crystallized with 20 Eq. Sulfonato-Calix[8]Arene and Soaked with 25 Eq. Spermine - Structure I (pdb code 6rsj). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Cytochrome C Co-Crystallized with 20 Eq. Sulfonato-Calix[8]Arene and Soaked with 25 Eq. Spermine - Structure I, PDB code: 6rsj:

Iron binding site 1 out of 1 in 6rsj

Go back to Iron Binding Sites List in 6rsj
Iron binding site 1 out of 1 in the Cytochrome C Co-Crystallized with 20 Eq. Sulfonato-Calix[8]Arene and Soaked with 25 Eq. Spermine - Structure I


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome C Co-Crystallized with 20 Eq. Sulfonato-Calix[8]Arene and Soaked with 25 Eq. Spermine - Structure I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:44.8
occ:1.00
FE A:HEC201 0.0 44.8 1.0
NC A:HEC201 1.9 45.0 1.0
ND A:HEC201 1.9 46.4 1.0
NB A:HEC201 2.0 44.7 1.0
NA A:HEC201 2.0 44.9 1.0
NE2 A:HIS18 2.1 42.2 1.0
O A:HOH357 2.1 43.0 1.0
C1C A:HEC201 3.0 43.5 1.0
CE1 A:HIS18 3.0 41.7 1.0
C4C A:HEC201 3.0 43.7 1.0
C1D A:HEC201 3.0 43.9 1.0
C4A A:HEC201 3.0 43.3 1.0
C1B A:HEC201 3.0 43.3 1.0
C4B A:HEC201 3.0 43.2 1.0
C1A A:HEC201 3.0 43.5 1.0
C4D A:HEC201 3.1 43.8 1.0
CD2 A:HIS18 3.1 42.5 1.0
CHC A:HEC201 3.4 43.4 1.0
CHD A:HEC201 3.5 44.2 1.0
CHB A:HEC201 3.5 43.5 1.0
CHA A:HEC201 3.5 44.1 1.0
ND1 A:HIS18 4.2 43.1 1.0
CG A:HIS18 4.2 42.4 1.0
C2C A:HEC201 4.2 43.9 1.0
C2D A:HEC201 4.2 44.5 1.0
C3D A:HEC201 4.2 44.7 1.0
C2A A:HEC201 4.3 43.8 1.0
C2B A:HEC201 4.3 43.5 1.0
C3A A:HEC201 4.3 43.7 1.0
C3C A:HEC201 4.3 44.1 1.0
C3B A:HEC201 4.3 43.4 1.0
OH A:TYR67 4.6 49.8 1.0
CE A:MET80 4.7 58.3 1.0
SD A:MET80 4.9 62.6 1.0

Reference:

S.Engilberge, M.L.Rennie, E.Dumont, P.B.Crowley. Tuning Protein Frameworks Via Auxiliary Supramolecular Interactions. Acs Nano V. 13 10343 2019.
ISSN: ESSN 1936-086X
PubMed: 31490058
DOI: 10.1021/ACSNANO.9B04115
Page generated: Wed Aug 7 09:21:00 2024

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