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Iron in PDB 6sva: Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator.

Protein crystallography data

The structure of Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator., PDB code: 6sva was solved by J.Sandy, J.Sanchez-Weatherby, H.Mikolajek, G.Lewis, R.Angus, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.64 / 1.92
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 108.515, 62.992, 54.591, 90.00, 111.05, 90.00
R / Rfree (%) 14.1 / 17.3

Iron Binding Sites:

The binding sites of Iron atom in the Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator. (pdb code 6sva). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator., PDB code: 6sva:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 6sva

Go back to Iron Binding Sites List in 6sva
Iron binding site 1 out of 2 in the Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:24.6
occ:1.00
FE A:HEM201 0.0 24.6 1.0
ND A:HEM201 2.0 27.1 1.0
NA A:HEM201 2.0 27.5 1.0
NC A:HEM201 2.1 21.2 1.0
NB A:HEM201 2.1 24.6 1.0
NE2 A:HIS87 2.1 22.8 1.0
O A:HOH312 2.3 31.4 1.0
C4D A:HEM201 3.0 27.6 1.0
C1A A:HEM201 3.0 26.2 1.0
C1C A:HEM201 3.0 22.2 1.0
C4C A:HEM201 3.1 22.6 1.0
C4A A:HEM201 3.1 29.1 1.0
C1D A:HEM201 3.1 32.1 1.0
C4B A:HEM201 3.1 25.4 1.0
C1B A:HEM201 3.1 26.2 1.0
CE1 A:HIS87 3.1 26.7 1.0
CD2 A:HIS87 3.1 24.7 1.0
HE1 A:HIS87 3.3 32.1 1.0
HD2 A:HIS87 3.3 29.7 1.0
CHA A:HEM201 3.3 24.9 1.0
CHC A:HEM201 3.4 21.7 1.0
CHD A:HEM201 3.4 25.3 1.0
CHB A:HEM201 3.5 31.6 1.0
HE2 A:HIS58 3.5 36.0 1.0
NE2 A:HIS58 4.2 29.9 1.0
C2A A:HEM201 4.2 32.9 1.0
C2C A:HEM201 4.2 24.4 1.0
HE1 A:HIS58 4.2 42.2 1.0
C3C A:HEM201 4.2 20.1 1.0
C3D A:HEM201 4.2 29.6 1.0
ND1 A:HIS87 4.3 26.4 1.0
C3A A:HEM201 4.3 29.2 1.0
CG A:HIS87 4.3 23.0 1.0
C2D A:HEM201 4.3 29.6 1.0
HHA A:HEM201 4.3 29.9 1.0
C2B A:HEM201 4.3 25.7 1.0
C3B A:HEM201 4.3 19.8 1.0
HHC A:HEM201 4.4 26.1 1.0
HG22 A:VAL62 4.4 38.9 1.0
HHD A:HEM201 4.4 30.5 1.0
HHB A:HEM201 4.4 38.0 1.0
CE1 A:HIS58 4.6 35.1 1.0
HZ A:PHE43 4.8 30.6 1.0
HD12 A:LEU91 4.9 44.5 1.0
HD13 A:LEU136 5.0 45.0 1.0
HD13 A:LEU91 5.0 44.5 1.0

Iron binding site 2 out of 2 in 6sva

Go back to Iron Binding Sites List in 6sva
Iron binding site 2 out of 2 in the Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator.


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:30.8
occ:1.00
FE B:HEM201 0.0 30.8 1.0
NA B:HEM201 2.0 28.2 1.0
NC B:HEM201 2.1 27.5 1.0
ND B:HEM201 2.1 33.7 1.0
NB B:HEM201 2.1 30.4 1.0
NE2 B:HIS92 2.3 31.5 1.0
O B:HOH305 2.3 42.6 1.0
C4A B:HEM201 3.0 32.7 1.0
C1C B:HEM201 3.1 26.1 1.0
C4C B:HEM201 3.1 27.6 1.0
C1B B:HEM201 3.1 31.7 1.0
C1D B:HEM201 3.1 31.2 1.0
C1A B:HEM201 3.1 35.6 1.0
C4D B:HEM201 3.1 30.0 1.0
C4B B:HEM201 3.1 29.6 1.0
CD2 B:HIS92 3.1 32.9 1.0
HD2 B:HIS92 3.2 39.5 1.0
CE1 B:HIS92 3.3 37.6 1.0
HE2 B:HIS63 3.3 38.8 1.0
CHB B:HEM201 3.4 33.6 1.0
CHC B:HEM201 3.4 27.1 1.0
CHD B:HEM201 3.4 32.4 1.0
CHA B:HEM201 3.5 34.7 1.0
HE1 B:HIS92 3.5 45.2 1.0
HG22 B:VAL67 3.8 30.3 1.0
NE2 B:HIS63 4.2 32.3 1.0
C3A B:HEM201 4.3 33.5 1.0
C2C B:HEM201 4.3 31.6 1.0
C2A B:HEM201 4.3 40.2 1.0
C3C B:HEM201 4.3 29.0 1.0
C2D B:HEM201 4.3 30.2 1.0
C3D B:HEM201 4.3 34.8 1.0
CG B:HIS92 4.3 41.9 1.0
C2B B:HEM201 4.3 28.0 1.0
C3B B:HEM201 4.4 30.7 1.0
ND1 B:HIS92 4.4 35.7 1.0
HHB B:HEM201 4.4 40.4 1.0
HHC B:HEM201 4.4 32.6 1.0
HHD B:HEM201 4.4 38.9 1.0
HHA B:HEM201 4.5 41.7 1.0
HG21 B:VAL67 4.5 30.3 1.0
CG2 B:VAL67 4.6 25.2 1.0
HE1 B:HIS63 4.6 44.4 1.0
HD13 B:LEU96 4.8 56.4 1.0
CE1 B:HIS63 4.8 37.0 1.0
HZ B:PHE42 4.9 37.9 1.0
HD12 B:LEU96 4.9 56.4 1.0
HE1 B:PHE103 5.0 47.9 1.0
HG23 B:VAL67 5.0 30.3 1.0

Reference:

J.Sandy, J.Sanchez-Weatherby, H.Mikolajek, G.Lewis, R.Angus. Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator. To Be Published.
Page generated: Wed Aug 7 10:34:31 2024

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