Iron in PDB 6sva: Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator.
Protein crystallography data
The structure of Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator., PDB code: 6sva
was solved by
J.Sandy,
J.Sanchez-Weatherby,
H.Mikolajek,
G.Lewis,
R.Angus,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
50.64 /
1.92
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
108.515,
62.992,
54.591,
90.00,
111.05,
90.00
|
R / Rfree (%)
|
14.1 /
17.3
|
Iron Binding Sites:
The binding sites of Iron atom in the Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator.
(pdb code 6sva). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator., PDB code: 6sva:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 6sva
Go back to
Iron Binding Sites List in 6sva
Iron binding site 1 out
of 2 in the Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator.
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe201
b:24.6
occ:1.00
|
FE
|
A:HEM201
|
0.0
|
24.6
|
1.0
|
ND
|
A:HEM201
|
2.0
|
27.1
|
1.0
|
NA
|
A:HEM201
|
2.0
|
27.5
|
1.0
|
NC
|
A:HEM201
|
2.1
|
21.2
|
1.0
|
NB
|
A:HEM201
|
2.1
|
24.6
|
1.0
|
NE2
|
A:HIS87
|
2.1
|
22.8
|
1.0
|
O
|
A:HOH312
|
2.3
|
31.4
|
1.0
|
C4D
|
A:HEM201
|
3.0
|
27.6
|
1.0
|
C1A
|
A:HEM201
|
3.0
|
26.2
|
1.0
|
C1C
|
A:HEM201
|
3.0
|
22.2
|
1.0
|
C4C
|
A:HEM201
|
3.1
|
22.6
|
1.0
|
C4A
|
A:HEM201
|
3.1
|
29.1
|
1.0
|
C1D
|
A:HEM201
|
3.1
|
32.1
|
1.0
|
C4B
|
A:HEM201
|
3.1
|
25.4
|
1.0
|
C1B
|
A:HEM201
|
3.1
|
26.2
|
1.0
|
CE1
|
A:HIS87
|
3.1
|
26.7
|
1.0
|
CD2
|
A:HIS87
|
3.1
|
24.7
|
1.0
|
HE1
|
A:HIS87
|
3.3
|
32.1
|
1.0
|
HD2
|
A:HIS87
|
3.3
|
29.7
|
1.0
|
CHA
|
A:HEM201
|
3.3
|
24.9
|
1.0
|
CHC
|
A:HEM201
|
3.4
|
21.7
|
1.0
|
CHD
|
A:HEM201
|
3.4
|
25.3
|
1.0
|
CHB
|
A:HEM201
|
3.5
|
31.6
|
1.0
|
HE2
|
A:HIS58
|
3.5
|
36.0
|
1.0
|
NE2
|
A:HIS58
|
4.2
|
29.9
|
1.0
|
C2A
|
A:HEM201
|
4.2
|
32.9
|
1.0
|
C2C
|
A:HEM201
|
4.2
|
24.4
|
1.0
|
HE1
|
A:HIS58
|
4.2
|
42.2
|
1.0
|
C3C
|
A:HEM201
|
4.2
|
20.1
|
1.0
|
C3D
|
A:HEM201
|
4.2
|
29.6
|
1.0
|
ND1
|
A:HIS87
|
4.3
|
26.4
|
1.0
|
C3A
|
A:HEM201
|
4.3
|
29.2
|
1.0
|
CG
|
A:HIS87
|
4.3
|
23.0
|
1.0
|
C2D
|
A:HEM201
|
4.3
|
29.6
|
1.0
|
HHA
|
A:HEM201
|
4.3
|
29.9
|
1.0
|
C2B
|
A:HEM201
|
4.3
|
25.7
|
1.0
|
C3B
|
A:HEM201
|
4.3
|
19.8
|
1.0
|
HHC
|
A:HEM201
|
4.4
|
26.1
|
1.0
|
HG22
|
A:VAL62
|
4.4
|
38.9
|
1.0
|
HHD
|
A:HEM201
|
4.4
|
30.5
|
1.0
|
HHB
|
A:HEM201
|
4.4
|
38.0
|
1.0
|
CE1
|
A:HIS58
|
4.6
|
35.1
|
1.0
|
HZ
|
A:PHE43
|
4.8
|
30.6
|
1.0
|
HD12
|
A:LEU91
|
4.9
|
44.5
|
1.0
|
HD13
|
A:LEU136
|
5.0
|
45.0
|
1.0
|
HD13
|
A:LEU91
|
5.0
|
44.5
|
1.0
|
|
Iron binding site 2 out
of 2 in 6sva
Go back to
Iron Binding Sites List in 6sva
Iron binding site 2 out
of 2 in the Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator.
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator. within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe201
b:30.8
occ:1.00
|
FE
|
B:HEM201
|
0.0
|
30.8
|
1.0
|
NA
|
B:HEM201
|
2.0
|
28.2
|
1.0
|
NC
|
B:HEM201
|
2.1
|
27.5
|
1.0
|
ND
|
B:HEM201
|
2.1
|
33.7
|
1.0
|
NB
|
B:HEM201
|
2.1
|
30.4
|
1.0
|
NE2
|
B:HIS92
|
2.3
|
31.5
|
1.0
|
O
|
B:HOH305
|
2.3
|
42.6
|
1.0
|
C4A
|
B:HEM201
|
3.0
|
32.7
|
1.0
|
C1C
|
B:HEM201
|
3.1
|
26.1
|
1.0
|
C4C
|
B:HEM201
|
3.1
|
27.6
|
1.0
|
C1B
|
B:HEM201
|
3.1
|
31.7
|
1.0
|
C1D
|
B:HEM201
|
3.1
|
31.2
|
1.0
|
C1A
|
B:HEM201
|
3.1
|
35.6
|
1.0
|
C4D
|
B:HEM201
|
3.1
|
30.0
|
1.0
|
C4B
|
B:HEM201
|
3.1
|
29.6
|
1.0
|
CD2
|
B:HIS92
|
3.1
|
32.9
|
1.0
|
HD2
|
B:HIS92
|
3.2
|
39.5
|
1.0
|
CE1
|
B:HIS92
|
3.3
|
37.6
|
1.0
|
HE2
|
B:HIS63
|
3.3
|
38.8
|
1.0
|
CHB
|
B:HEM201
|
3.4
|
33.6
|
1.0
|
CHC
|
B:HEM201
|
3.4
|
27.1
|
1.0
|
CHD
|
B:HEM201
|
3.4
|
32.4
|
1.0
|
CHA
|
B:HEM201
|
3.5
|
34.7
|
1.0
|
HE1
|
B:HIS92
|
3.5
|
45.2
|
1.0
|
HG22
|
B:VAL67
|
3.8
|
30.3
|
1.0
|
NE2
|
B:HIS63
|
4.2
|
32.3
|
1.0
|
C3A
|
B:HEM201
|
4.3
|
33.5
|
1.0
|
C2C
|
B:HEM201
|
4.3
|
31.6
|
1.0
|
C2A
|
B:HEM201
|
4.3
|
40.2
|
1.0
|
C3C
|
B:HEM201
|
4.3
|
29.0
|
1.0
|
C2D
|
B:HEM201
|
4.3
|
30.2
|
1.0
|
C3D
|
B:HEM201
|
4.3
|
34.8
|
1.0
|
CG
|
B:HIS92
|
4.3
|
41.9
|
1.0
|
C2B
|
B:HEM201
|
4.3
|
28.0
|
1.0
|
C3B
|
B:HEM201
|
4.4
|
30.7
|
1.0
|
ND1
|
B:HIS92
|
4.4
|
35.7
|
1.0
|
HHB
|
B:HEM201
|
4.4
|
40.4
|
1.0
|
HHC
|
B:HEM201
|
4.4
|
32.6
|
1.0
|
HHD
|
B:HEM201
|
4.4
|
38.9
|
1.0
|
HHA
|
B:HEM201
|
4.5
|
41.7
|
1.0
|
HG21
|
B:VAL67
|
4.5
|
30.3
|
1.0
|
CG2
|
B:VAL67
|
4.6
|
25.2
|
1.0
|
HE1
|
B:HIS63
|
4.6
|
44.4
|
1.0
|
HD13
|
B:LEU96
|
4.8
|
56.4
|
1.0
|
CE1
|
B:HIS63
|
4.8
|
37.0
|
1.0
|
HZ
|
B:PHE42
|
4.9
|
37.9
|
1.0
|
HD12
|
B:LEU96
|
4.9
|
56.4
|
1.0
|
HE1
|
B:PHE103
|
5.0
|
47.9
|
1.0
|
HG23
|
B:VAL67
|
5.0
|
30.3
|
1.0
|
|
Reference:
J.Sandy,
J.Sanchez-Weatherby,
H.Mikolajek,
G.Lewis,
R.Angus.
Multicrystal Structure of Equine Haemoglobin at Room Temperature Using A Multilayer Monochromator. To Be Published.
Page generated: Wed Aug 7 10:34:31 2024
|