Iron in PDB 6t15: The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae
Enzymatic activity of The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae
All present enzymatic activity of The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae:
1.9.3.1;
7.1.1.8;
Other elements in 6t15:
The structure of The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae also contains other interesting chemical elements:
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Iron atom in the The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae
(pdb code 6t15). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 12 binding sites of Iron where determined in the
The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae, PDB code: 6t15:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 12 in 6t15
Go back to
Iron Binding Sites List in 6t15
Iron binding site 1 out
of 12 in the The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe601
b:95.8
occ:1.00
|
FE
|
C:HEM601
|
0.0
|
95.8
|
1.0
|
|
ND
|
C:HEM601
|
1.9
|
95.8
|
1.0
|
|
NA
|
C:HEM601
|
2.0
|
95.8
|
1.0
|
|
NE2
|
C:HIS183
|
2.0
|
96.9
|
1.0
|
|
NE2
|
C:HIS82
|
2.0
|
96.2
|
1.0
|
|
NC
|
C:HEM601
|
2.1
|
95.8
|
1.0
|
|
NB
|
C:HEM601
|
2.1
|
95.8
|
1.0
|
|
CE1
|
C:HIS183
|
2.7
|
96.9
|
1.0
|
|
C1D
|
C:HEM601
|
2.9
|
95.8
|
1.0
|
|
C4D
|
C:HEM601
|
2.9
|
95.8
|
1.0
|
|
CD2
|
C:HIS82
|
2.9
|
96.2
|
1.0
|
|
C1A
|
C:HEM601
|
2.9
|
95.8
|
1.0
|
|
C4C
|
C:HEM601
|
3.0
|
95.8
|
1.0
|
|
C4A
|
C:HEM601
|
3.0
|
95.8
|
1.0
|
|
CE1
|
C:HIS82
|
3.1
|
96.2
|
1.0
|
|
C4B
|
C:HEM601
|
3.1
|
95.8
|
1.0
|
|
C1B
|
C:HEM601
|
3.1
|
95.8
|
1.0
|
|
C1C
|
C:HEM601
|
3.1
|
95.8
|
1.0
|
|
CD2
|
C:HIS183
|
3.2
|
96.9
|
1.0
|
|
CHA
|
C:HEM601
|
3.3
|
95.8
|
1.0
|
|
CHD
|
C:HEM601
|
3.4
|
95.8
|
1.0
|
|
CHB
|
C:HEM601
|
3.5
|
95.8
|
1.0
|
|
CHC
|
C:HEM601
|
3.5
|
95.8
|
1.0
|
|
ND1
|
C:HIS183
|
3.9
|
96.9
|
1.0
|
|
CG
|
C:HIS82
|
4.1
|
96.2
|
1.0
|
|
ND1
|
C:HIS82
|
4.1
|
96.2
|
1.0
|
|
C2D
|
C:HEM601
|
4.1
|
95.8
|
1.0
|
|
C2A
|
C:HEM601
|
4.1
|
95.8
|
1.0
|
|
C3D
|
C:HEM601
|
4.1
|
95.8
|
1.0
|
|
CG
|
C:HIS183
|
4.2
|
96.9
|
1.0
|
|
C3A
|
C:HEM601
|
4.2
|
95.8
|
1.0
|
|
C3C
|
C:HEM601
|
4.2
|
95.8
|
1.0
|
|
C2C
|
C:HEM601
|
4.3
|
95.8
|
1.0
|
|
C2B
|
C:HEM601
|
4.3
|
95.8
|
1.0
|
|
C3B
|
C:HEM601
|
4.3
|
95.8
|
1.0
|
|
CA
|
C:GLY131
|
4.7
|
99.5
|
1.0
|
|
Iron binding site 2 out
of 12 in 6t15
Go back to
Iron Binding Sites List in 6t15
Iron binding site 2 out
of 12 in the The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe602
b:0.9
occ:1.00
|
FE
|
C:HEM602
|
0.0
|
0.9
|
1.0
|
|
ND
|
C:HEM602
|
1.9
|
0.9
|
1.0
|
|
NA
|
C:HEM602
|
2.0
|
0.9
|
1.0
|
|
NE2
|
C:HIS197
|
2.0
|
0.5
|
1.0
|
|
NE2
|
C:HIS96
|
2.0
|
0.6
|
1.0
|
|
NC
|
C:HEM602
|
2.1
|
0.9
|
1.0
|
|
NB
|
C:HEM602
|
2.1
|
0.9
|
1.0
|
|
CD2
|
C:HIS96
|
2.8
|
0.6
|
1.0
|
|
C4D
|
C:HEM602
|
2.9
|
0.9
|
1.0
|
|
C1D
|
C:HEM602
|
2.9
|
0.9
|
1.0
|
|
CD2
|
C:HIS197
|
2.9
|
0.5
|
1.0
|
|
C1A
|
C:HEM602
|
2.9
|
0.9
|
1.0
|
|
CE1
|
C:HIS197
|
3.0
|
0.5
|
1.0
|
|
C4C
|
C:HEM602
|
3.0
|
0.9
|
1.0
|
|
C4A
|
C:HEM602
|
3.0
|
0.9
|
1.0
|
|
C1B
|
C:HEM602
|
3.1
|
0.9
|
1.0
|
|
C4B
|
C:HEM602
|
3.1
|
0.9
|
1.0
|
|
CE1
|
C:HIS96
|
3.1
|
0.6
|
1.0
|
|
C1C
|
C:HEM602
|
3.1
|
0.9
|
1.0
|
|
CHA
|
C:HEM602
|
3.3
|
0.9
|
1.0
|
|
CHD
|
C:HEM602
|
3.4
|
0.9
|
1.0
|
|
CHB
|
C:HEM602
|
3.5
|
0.9
|
1.0
|
|
CHC
|
C:HEM602
|
3.5
|
0.9
|
1.0
|
|
ND1
|
C:HIS197
|
4.0
|
0.5
|
1.0
|
|
CG
|
C:HIS197
|
4.0
|
0.5
|
1.0
|
|
CG
|
C:HIS96
|
4.0
|
0.6
|
1.0
|
|
C3D
|
C:HEM602
|
4.1
|
0.9
|
1.0
|
|
C2D
|
C:HEM602
|
4.1
|
0.9
|
1.0
|
|
ND1
|
C:HIS96
|
4.1
|
0.6
|
1.0
|
|
C2A
|
C:HEM602
|
4.1
|
0.9
|
1.0
|
|
C3A
|
C:HEM602
|
4.2
|
0.9
|
1.0
|
|
C3C
|
C:HEM602
|
4.2
|
0.9
|
1.0
|
|
C2C
|
C:HEM602
|
4.3
|
0.9
|
1.0
|
|
C2B
|
C:HEM602
|
4.3
|
0.9
|
1.0
|
|
C3B
|
C:HEM602
|
4.4
|
0.9
|
1.0
|
|
Iron binding site 3 out
of 12 in 6t15
Go back to
Iron Binding Sites List in 6t15
Iron binding site 3 out
of 12 in the The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe401
b:0.4
occ:1.00
|
FE
|
D:HEC401
|
0.0
|
0.4
|
1.0
|
|
SD
|
D:MET225
|
2.0
|
0.1
|
1.0
|
|
NE2
|
D:HIS105
|
2.0
|
0.7
|
1.0
|
|
NA
|
D:HEC401
|
2.1
|
0.4
|
1.0
|
|
NC
|
D:HEC401
|
2.1
|
0.4
|
1.0
|
|
ND
|
D:HEC401
|
2.1
|
0.4
|
1.0
|
|
NB
|
D:HEC401
|
2.1
|
0.4
|
1.0
|
|
CE1
|
D:HIS105
|
2.9
|
0.7
|
1.0
|
|
CD2
|
D:HIS105
|
3.0
|
0.7
|
1.0
|
|
C1D
|
D:HEC401
|
3.1
|
0.4
|
1.0
|
|
C4A
|
D:HEC401
|
3.1
|
0.4
|
1.0
|
|
C1B
|
D:HEC401
|
3.1
|
0.4
|
1.0
|
|
C1C
|
D:HEC401
|
3.1
|
0.4
|
1.0
|
|
C4C
|
D:HEC401
|
3.1
|
0.4
|
1.0
|
|
C4B
|
D:HEC401
|
3.1
|
0.4
|
1.0
|
|
C1A
|
D:HEC401
|
3.1
|
0.4
|
1.0
|
|
C4D
|
D:HEC401
|
3.1
|
0.4
|
1.0
|
|
CE
|
D:MET225
|
3.3
|
0.1
|
1.0
|
|
CG
|
D:MET225
|
3.4
|
0.1
|
1.0
|
|
CHC
|
D:HEC401
|
3.4
|
0.4
|
1.0
|
|
CHD
|
D:HEC401
|
3.4
|
0.4
|
1.0
|
|
CHB
|
D:HEC401
|
3.4
|
0.4
|
1.0
|
|
CHA
|
D:HEC401
|
3.5
|
0.4
|
1.0
|
|
ND1
|
D:HIS105
|
4.0
|
0.7
|
1.0
|
|
CB
|
D:MET225
|
4.1
|
0.1
|
1.0
|
|
CG
|
D:HIS105
|
4.1
|
0.7
|
1.0
|
|
C3A
|
D:HEC401
|
4.4
|
0.4
|
1.0
|
|
C2D
|
D:HEC401
|
4.4
|
0.4
|
1.0
|
|
C3B
|
D:HEC401
|
4.4
|
0.4
|
1.0
|
|
C3C
|
D:HEC401
|
4.4
|
0.4
|
1.0
|
|
C2A
|
D:HEC401
|
4.4
|
0.4
|
1.0
|
|
C3D
|
D:HEC401
|
4.4
|
0.4
|
1.0
|
|
C2B
|
D:HEC401
|
4.4
|
0.4
|
1.0
|
|
C2C
|
D:HEC401
|
4.4
|
0.4
|
1.0
|
|
Iron binding site 4 out
of 12 in 6t15
Go back to
Iron Binding Sites List in 6t15
Iron binding site 4 out
of 12 in the The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe301
b:0.4
occ:1.00
|
FE1
|
E:FES301
|
0.0
|
0.4
|
1.0
|
|
SG
|
E:CYS159
|
2.2
|
0.6
|
1.0
|
|
S1
|
E:FES301
|
2.2
|
0.4
|
1.0
|
|
S2
|
E:FES301
|
2.2
|
0.4
|
1.0
|
|
SG
|
E:CYS178
|
2.3
|
0.4
|
1.0
|
|
CB
|
E:CYS159
|
2.9
|
0.6
|
1.0
|
|
FE2
|
E:FES301
|
3.1
|
0.4
|
1.0
|
|
CB
|
E:CYS178
|
3.5
|
0.4
|
1.0
|
|
CB
|
E:HIS161
|
4.0
|
0.6
|
1.0
|
|
CB
|
E:CYS180
|
4.0
|
0.1
|
1.0
|
|
O
|
E:CYS164
|
4.2
|
0.6
|
1.0
|
|
SG
|
E:CYS180
|
4.3
|
0.1
|
1.0
|
|
CA
|
E:CYS159
|
4.3
|
0.6
|
1.0
|
|
N
|
E:CYS164
|
4.5
|
0.6
|
1.0
|
|
CB
|
E:CYS164
|
4.5
|
0.6
|
1.0
|
|
C
|
E:CYS164
|
4.6
|
0.6
|
1.0
|
|
CG
|
E:HIS161
|
4.6
|
0.6
|
1.0
|
|
N
|
E:CYS159
|
4.7
|
0.6
|
1.0
|
|
CA
|
E:CYS164
|
4.8
|
0.6
|
1.0
|
|
CA
|
E:CYS178
|
4.8
|
0.4
|
1.0
|
|
N
|
E:HIS181
|
4.9
|
0.4
|
1.0
|
|
CG
|
E:PRO166
|
5.0
|
0.2
|
1.0
|
|
N
|
E:LEU162
|
5.0
|
0.8
|
1.0
|
|
ND1
|
E:HIS181
|
5.0
|
0.4
|
1.0
|
|
Iron binding site 5 out
of 12 in 6t15
Go back to
Iron Binding Sites List in 6t15
Iron binding site 5 out
of 12 in the The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe301
b:0.4
occ:1.00
|
FE2
|
E:FES301
|
0.0
|
0.4
|
1.0
|
|
ND1
|
E:HIS181
|
2.2
|
0.4
|
1.0
|
|
S2
|
E:FES301
|
2.2
|
0.4
|
1.0
|
|
S1
|
E:FES301
|
2.2
|
0.4
|
1.0
|
|
ND1
|
E:HIS161
|
2.2
|
0.6
|
1.0
|
|
CG
|
E:HIS161
|
2.6
|
0.6
|
1.0
|
|
CB
|
E:HIS161
|
2.9
|
0.6
|
1.0
|
|
CE1
|
E:HIS161
|
3.0
|
0.6
|
1.0
|
|
CE1
|
E:HIS181
|
3.1
|
0.4
|
1.0
|
|
FE1
|
E:FES301
|
3.1
|
0.4
|
1.0
|
|
CG
|
E:HIS181
|
3.2
|
0.4
|
1.0
|
|
CD2
|
E:HIS161
|
3.4
|
0.6
|
1.0
|
|
CB
|
E:HIS181
|
3.5
|
0.4
|
1.0
|
|
NE2
|
E:HIS161
|
3.6
|
0.6
|
1.0
|
|
N
|
E:LEU162
|
3.9
|
0.8
|
1.0
|
|
N
|
E:HIS181
|
4.1
|
0.4
|
1.0
|
|
CA
|
E:HIS161
|
4.2
|
0.6
|
1.0
|
|
SG
|
E:CYS178
|
4.2
|
0.4
|
1.0
|
|
C
|
E:HIS161
|
4.2
|
0.6
|
1.0
|
|
NE2
|
E:HIS181
|
4.3
|
0.4
|
1.0
|
|
CD2
|
E:HIS181
|
4.3
|
0.4
|
1.0
|
|
CA
|
E:HIS181
|
4.4
|
0.4
|
1.0
|
|
CB
|
E:CYS180
|
4.4
|
0.1
|
1.0
|
|
C
|
E:CYS180
|
4.5
|
0.1
|
1.0
|
|
CB
|
E:LEU162
|
4.5
|
0.8
|
1.0
|
|
CD2
|
E:LEU162
|
4.6
|
0.8
|
1.0
|
|
CA
|
E:LEU162
|
4.8
|
0.8
|
1.0
|
|
O
|
E:CYS180
|
4.9
|
0.1
|
1.0
|
|
CB
|
E:CYS159
|
4.9
|
0.6
|
1.0
|
|
Iron binding site 6 out
of 12 in 6t15
Go back to
Iron Binding Sites List in 6t15
Iron binding site 6 out
of 12 in the The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
N:Fe601
b:95.9
occ:1.00
|
FE
|
N:HEM601
|
0.0
|
95.9
|
1.0
|
|
ND
|
N:HEM601
|
1.9
|
95.9
|
1.0
|
|
NA
|
N:HEM601
|
2.0
|
95.9
|
1.0
|
|
NE2
|
N:HIS82
|
2.0
|
97.2
|
1.0
|
|
NE2
|
N:HIS183
|
2.0
|
96.5
|
1.0
|
|
NC
|
N:HEM601
|
2.1
|
95.9
|
1.0
|
|
NB
|
N:HEM601
|
2.1
|
95.9
|
1.0
|
|
CE1
|
N:HIS183
|
2.5
|
96.5
|
1.0
|
|
C1D
|
N:HEM601
|
2.9
|
95.9
|
1.0
|
|
C4D
|
N:HEM601
|
2.9
|
95.9
|
1.0
|
|
C1A
|
N:HEM601
|
2.9
|
95.9
|
1.0
|
|
CD2
|
N:HIS82
|
2.9
|
97.2
|
1.0
|
|
CE1
|
N:HIS82
|
3.0
|
97.2
|
1.0
|
|
C4C
|
N:HEM601
|
3.0
|
95.9
|
1.0
|
|
C4A
|
N:HEM601
|
3.0
|
95.9
|
1.0
|
|
C1B
|
N:HEM601
|
3.1
|
95.9
|
1.0
|
|
C4B
|
N:HEM601
|
3.1
|
95.9
|
1.0
|
|
C1C
|
N:HEM601
|
3.1
|
95.9
|
1.0
|
|
CD2
|
N:HIS183
|
3.3
|
96.5
|
1.0
|
|
CHA
|
N:HEM601
|
3.3
|
95.9
|
1.0
|
|
CHD
|
N:HEM601
|
3.4
|
95.9
|
1.0
|
|
CHB
|
N:HEM601
|
3.5
|
95.9
|
1.0
|
|
CHC
|
N:HEM601
|
3.5
|
95.9
|
1.0
|
|
ND1
|
N:HIS183
|
3.8
|
96.5
|
1.0
|
|
ND1
|
N:HIS82
|
4.1
|
97.2
|
1.0
|
|
CG
|
N:HIS82
|
4.1
|
97.2
|
1.0
|
|
C2D
|
N:HEM601
|
4.1
|
95.9
|
1.0
|
|
C2A
|
N:HEM601
|
4.1
|
95.9
|
1.0
|
|
C3D
|
N:HEM601
|
4.1
|
95.9
|
1.0
|
|
CG
|
N:HIS183
|
4.2
|
96.5
|
1.0
|
|
C3A
|
N:HEM601
|
4.2
|
95.9
|
1.0
|
|
C3C
|
N:HEM601
|
4.2
|
95.9
|
1.0
|
|
C2C
|
N:HEM601
|
4.3
|
95.9
|
1.0
|
|
C2B
|
N:HEM601
|
4.3
|
95.9
|
1.0
|
|
C3B
|
N:HEM601
|
4.3
|
95.9
|
1.0
|
|
CA
|
N:GLY131
|
4.6
|
0.8
|
1.0
|
|
Iron binding site 7 out
of 12 in 6t15
Go back to
Iron Binding Sites List in 6t15
Iron binding site 7 out
of 12 in the The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
N:Fe602
b:98.8
occ:1.00
|
FE
|
N:HEM602
|
0.0
|
98.8
|
1.0
|
|
ND
|
N:HEM602
|
1.9
|
98.8
|
1.0
|
|
NA
|
N:HEM602
|
2.0
|
98.8
|
1.0
|
|
NE2
|
N:HIS197
|
2.0
|
98.8
|
1.0
|
|
NE2
|
N:HIS96
|
2.0
|
0.2
|
1.0
|
|
NC
|
N:HEM602
|
2.1
|
98.8
|
1.0
|
|
NB
|
N:HEM602
|
2.1
|
98.8
|
1.0
|
|
CD2
|
N:HIS96
|
2.8
|
0.2
|
1.0
|
|
CD2
|
N:HIS197
|
2.8
|
98.8
|
1.0
|
|
C4D
|
N:HEM602
|
2.9
|
98.8
|
1.0
|
|
C1D
|
N:HEM602
|
2.9
|
98.8
|
1.0
|
|
C1A
|
N:HEM602
|
3.0
|
98.8
|
1.0
|
|
C4C
|
N:HEM602
|
3.0
|
98.8
|
1.0
|
|
C4A
|
N:HEM602
|
3.0
|
98.8
|
1.0
|
|
CE1
|
N:HIS197
|
3.0
|
98.8
|
1.0
|
|
C1B
|
N:HEM602
|
3.1
|
98.8
|
1.0
|
|
C4B
|
N:HEM602
|
3.1
|
98.8
|
1.0
|
|
C1C
|
N:HEM602
|
3.1
|
98.8
|
1.0
|
|
CE1
|
N:HIS96
|
3.1
|
0.2
|
1.0
|
|
CHA
|
N:HEM602
|
3.3
|
98.8
|
1.0
|
|
CHD
|
N:HEM602
|
3.4
|
98.8
|
1.0
|
|
CHB
|
N:HEM602
|
3.5
|
98.8
|
1.0
|
|
CHC
|
N:HEM602
|
3.5
|
98.8
|
1.0
|
|
CG
|
N:HIS197
|
4.0
|
98.8
|
1.0
|
|
CG
|
N:HIS96
|
4.0
|
0.2
|
1.0
|
|
ND1
|
N:HIS197
|
4.1
|
98.8
|
1.0
|
|
C3D
|
N:HEM602
|
4.1
|
98.8
|
1.0
|
|
C2D
|
N:HEM602
|
4.1
|
98.8
|
1.0
|
|
ND1
|
N:HIS96
|
4.1
|
0.2
|
1.0
|
|
C2A
|
N:HEM602
|
4.2
|
98.8
|
1.0
|
|
C3A
|
N:HEM602
|
4.2
|
98.8
|
1.0
|
|
C3C
|
N:HEM602
|
4.3
|
98.8
|
1.0
|
|
C2C
|
N:HEM602
|
4.3
|
98.8
|
1.0
|
|
C2B
|
N:HEM602
|
4.3
|
98.8
|
1.0
|
|
C3B
|
N:HEM602
|
4.3
|
98.8
|
1.0
|
|
Iron binding site 8 out
of 12 in 6t15
Go back to
Iron Binding Sites List in 6t15
Iron binding site 8 out
of 12 in the The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
O:Fe401
b:0.0
occ:1.00
|
FE
|
O:HEC401
|
0.0
|
0.0
|
1.0
|
|
SD
|
O:MET225
|
2.0
|
0.3
|
1.0
|
|
NE2
|
O:HIS105
|
2.0
|
99.8
|
1.0
|
|
NA
|
O:HEC401
|
2.1
|
0.0
|
1.0
|
|
NB
|
O:HEC401
|
2.1
|
0.0
|
1.0
|
|
NC
|
O:HEC401
|
2.1
|
0.0
|
1.0
|
|
ND
|
O:HEC401
|
2.1
|
0.0
|
1.0
|
|
CE1
|
O:HIS105
|
2.8
|
99.8
|
1.0
|
|
C1B
|
O:HEC401
|
3.1
|
0.0
|
1.0
|
|
CD2
|
O:HIS105
|
3.1
|
99.8
|
1.0
|
|
C1D
|
O:HEC401
|
3.1
|
0.0
|
1.0
|
|
C1A
|
O:HEC401
|
3.1
|
0.0
|
1.0
|
|
C4C
|
O:HEC401
|
3.1
|
0.0
|
1.0
|
|
C1C
|
O:HEC401
|
3.1
|
0.0
|
1.0
|
|
C4A
|
O:HEC401
|
3.1
|
0.0
|
1.0
|
|
C4B
|
O:HEC401
|
3.1
|
0.0
|
1.0
|
|
C4D
|
O:HEC401
|
3.1
|
0.0
|
1.0
|
|
CG
|
O:MET225
|
3.3
|
0.3
|
1.0
|
|
CHC
|
O:HEC401
|
3.4
|
0.0
|
1.0
|
|
CHD
|
O:HEC401
|
3.4
|
0.0
|
1.0
|
|
CHA
|
O:HEC401
|
3.5
|
0.0
|
1.0
|
|
CHB
|
O:HEC401
|
3.5
|
0.0
|
1.0
|
|
CE
|
O:MET225
|
3.5
|
0.3
|
1.0
|
|
ND1
|
O:HIS105
|
3.9
|
99.8
|
1.0
|
|
CB
|
O:MET225
|
4.1
|
0.3
|
1.0
|
|
CG
|
O:HIS105
|
4.1
|
99.8
|
1.0
|
|
C3B
|
O:HEC401
|
4.4
|
0.0
|
1.0
|
|
C3C
|
O:HEC401
|
4.4
|
0.0
|
1.0
|
|
C2A
|
O:HEC401
|
4.4
|
0.0
|
1.0
|
|
C2D
|
O:HEC401
|
4.4
|
0.0
|
1.0
|
|
C3A
|
O:HEC401
|
4.4
|
0.0
|
1.0
|
|
C2B
|
O:HEC401
|
4.4
|
0.0
|
1.0
|
|
C3D
|
O:HEC401
|
4.4
|
0.0
|
1.0
|
|
C2C
|
O:HEC401
|
4.4
|
0.0
|
1.0
|
|
Iron binding site 9 out
of 12 in 6t15
Go back to
Iron Binding Sites List in 6t15
Iron binding site 9 out
of 12 in the The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe301
b:0.9
occ:1.00
|
FE1
|
P:FES301
|
0.0
|
0.9
|
1.0
|
|
S1
|
P:FES301
|
2.2
|
0.9
|
1.0
|
|
S2
|
P:FES301
|
2.2
|
0.9
|
1.0
|
|
SG
|
P:CYS178
|
2.3
|
0.1
|
1.0
|
|
SG
|
P:CYS159
|
2.4
|
0.2
|
1.0
|
|
CB
|
P:CYS159
|
2.5
|
0.2
|
1.0
|
|
O
|
P:CYS164
|
2.9
|
0.5
|
1.0
|
|
FE2
|
P:FES301
|
3.2
|
0.9
|
1.0
|
|
CB
|
P:CYS178
|
3.4
|
0.1
|
1.0
|
|
C
|
P:CYS164
|
4.0
|
0.5
|
1.0
|
|
CA
|
P:CYS159
|
4.0
|
0.2
|
1.0
|
|
N
|
P:CYS164
|
4.2
|
0.5
|
1.0
|
|
CB
|
P:CYS164
|
4.4
|
0.5
|
1.0
|
|
CA
|
P:CYS164
|
4.4
|
0.5
|
1.0
|
|
N
|
P:CYS159
|
4.6
|
0.2
|
1.0
|
|
CB
|
P:HIS161
|
4.7
|
0.8
|
1.0
|
|
C
|
P:CYS159
|
4.8
|
0.2
|
1.0
|
|
CA
|
P:CYS178
|
4.8
|
0.1
|
1.0
|
|
OG
|
P:SER183
|
4.8
|
0.6
|
1.0
|
|
CB
|
P:SER183
|
4.9
|
0.6
|
1.0
|
|
CB
|
P:CYS180
|
5.0
|
0.7
|
1.0
|
|
OH
|
P:TYR185
|
5.0
|
0.8
|
1.0
|
|
Iron binding site 10 out
of 12 in 6t15
Go back to
Iron Binding Sites List in 6t15
Iron binding site 10 out
of 12 in the The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of The III2-IV(5B)1 Respiratory Supercomplex From S. Cerevisiae within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe301
b:0.9
occ:1.00
|
FE2
|
P:FES301
|
0.0
|
0.9
|
1.0
|
|
S2
|
P:FES301
|
2.2
|
0.9
|
1.0
|
|
S1
|
P:FES301
|
2.2
|
0.9
|
1.0
|
|
ND1
|
P:HIS161
|
2.3
|
0.8
|
1.0
|
|
ND1
|
P:HIS181
|
2.3
|
0.3
|
1.0
|
|
CG
|
P:HIS181
|
3.1
|
0.3
|
1.0
|
|
CG
|
P:HIS161
|
3.1
|
0.8
|
1.0
|
|
FE1
|
P:FES301
|
3.2
|
0.9
|
1.0
|
|
CB
|
P:HIS181
|
3.3
|
0.3
|
1.0
|
|
CE1
|
P:HIS161
|
3.3
|
0.8
|
1.0
|
|
CB
|
P:HIS161
|
3.3
|
0.8
|
1.0
|
|
CE1
|
P:HIS181
|
3.3
|
0.3
|
1.0
|
|
N
|
P:HIS181
|
4.2
|
0.3
|
1.0
|
|
SG
|
P:CYS178
|
4.2
|
0.1
|
1.0
|
|
N
|
P:LEU162
|
4.2
|
1.0
|
1.0
|
|
CA
|
P:HIS181
|
4.3
|
0.3
|
1.0
|
|
CD2
|
P:HIS181
|
4.3
|
0.3
|
1.0
|
|
CD2
|
P:HIS161
|
4.3
|
0.8
|
1.0
|
|
NE2
|
P:HIS161
|
4.4
|
0.8
|
1.0
|
|
NE2
|
P:HIS181
|
4.4
|
0.3
|
1.0
|
|
CA
|
P:HIS161
|
4.6
|
0.8
|
1.0
|
|
OG
|
P:SER183
|
4.6
|
0.6
|
1.0
|
|
C
|
P:CYS180
|
4.7
|
0.7
|
1.0
|
|
C
|
P:HIS161
|
4.8
|
0.8
|
1.0
|
|
CB
|
P:CYS159
|
4.9
|
0.2
|
1.0
|
|
CB
|
P:CYS164
|
5.0
|
0.5
|
1.0
|
|
Reference:
A.M.Hartley,
B.Meunier,
N.Pinotsis,
A.Marechal.
RCF2 Revealed in Cryo-Em Structures of Hypoxic Isoforms of Mature Mitochondrial III-IV Supercomplexes. Proc.Natl.Acad.Sci.Usa 2020.
ISSN: ESSN 1091-6490
PubMed: 32291341
DOI: 10.1073/PNAS.1920612117
Page generated: Wed Aug 7 10:37:43 2024
|
