Iron in PDB 6teh: Baseplate of Native Gta Particle Computed with C3 Symmetry

The binding sites of Iron atom in the Baseplate of Native Gta Particle Computed with C3 Symmetry (pdb code 6teh). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Baseplate of Native Gta Particle Computed with C3 Symmetry, PDB code: 6teh:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Baseplate of Native Gta Particle Computed with C3 Symmetry


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Baseplate of Native Gta Particle Computed with C3 Symmetry within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe301 b:72.7 occ:1.00 FE1 C:SF4301 0.0 72.7 1.0 S2 C:SF4301 2.3 72.7 1.0 S3 C:SF4301 2.3 72.7 1.0 S4 C:SF4301 2.3 72.7 1.0 FE3 C:SF4301 2.7 72.7 1.0 FE4 C:SF4301 2.7 72.7 1.0 FE2 C:SF4301 2.7 72.7 1.0 SG C:CYS257 3.1 62.4 1.0 O C:ASN263 3.8 69.1 1.0 S1 C:SF4301 3.9 72.7 1.0 SG C:CYS159 4.0 69.0 1.0 CB C:CYS257 4.1 62.4 1.0 CA C:CYS257 4.6 62.4 1.0 O C:ASN266 4.8 65.0 1.0 C C:ASN263 4.9 69.1 1.0

Iron binding site 2 out of 4 in the Baseplate of Native Gta Particle Computed with C3 Symmetry


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Baseplate of Native Gta Particle Computed with C3 Symmetry within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe301 b:72.7 occ:1.00 FE2 C:SF4301 0.0 72.7 1.0 S3 C:SF4301 2.3 72.7 1.0 S1 C:SF4301 2.3 72.7 1.0 S4 C:SF4301 2.3 72.7 1.0 FE4 C:SF4301 2.7 72.7 1.0 FE3 C:SF4301 2.7 72.7 1.0 FE1 C:SF4301 2.7 72.7 1.0 SG C:CYS250 3.0 69.3 1.0 CB C:CYS250 3.1 69.3 1.0 S2 C:SF4301 3.9 72.7 1.0 CA C:CYS250 4.5 69.3 1.0 CE2 C:PHE261 4.9 66.3 1.0 CD2 C:PHE261 4.9 66.3 1.0 CG C:LEU154 4.9 56.3 1.0 CA C:LYS252 4.9 57.7 1.0 CG C:LYS252 5.0 57.7 1.0 N C:LYS252 5.0 57.7 1.0

Iron binding site 3 out of 4 in the Baseplate of Native Gta Particle Computed with C3 Symmetry


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Baseplate of Native Gta Particle Computed with C3 Symmetry within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe301 b:72.7 occ:1.00 FE3 C:SF4301 0.0 72.7 1.0 S1 C:SF4301 2.3 72.7 1.0 S4 C:SF4301 2.3 72.7 1.0 S2 C:SF4301 2.3 72.7 1.0 FE2 C:SF4301 2.7 72.7 1.0 FE1 C:SF4301 2.7 72.7 1.0 FE4 C:SF4301 2.7 72.7 1.0 SG C:CYS159 3.1 69.0 1.0 CB C:CYS159 3.3 69.0 1.0 S3 C:SF4301 3.9 72.7 1.0 SG C:CYS150 4.2 53.6 1.0 O C:VAL153 4.5 59.9 1.0 O C:ALA152 4.6 57.3 1.0 O C:ASN266 4.6 65.0 1.0 CA C:CYS159 4.8 69.0 1.0 O C:CYS159 4.9 69.0 1.0 C C:VAL153 5.0 59.9 1.0

Iron binding site 4 out of 4 in the Baseplate of Native Gta Particle Computed with C3 Symmetry


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Baseplate of Native Gta Particle Computed with C3 Symmetry within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe301 b:72.7 occ:1.00 FE4 C:SF4301 0.0 72.7 1.0 S2 C:SF4301 2.3 72.7 1.0 S3 C:SF4301 2.3 72.7 1.0 S1 C:SF4301 2.3 72.7 1.0 FE2 C:SF4301 2.7 72.7 1.0 FE1 C:SF4301 2.7 72.7 1.0 FE3 C:SF4301 2.7 72.7 1.0 SG C:CYS150 3.1 53.6 1.0 CB C:CYS150 3.1 53.6 1.0 S4 C:SF4301 3.9 72.7 1.0 CA C:LYS252 4.1 57.7 1.0 O C:PHE267 4.4 60.4 1.0 CG C:LYS252 4.5 57.7 1.0 CA C:CYS150 4.6 53.6 1.0 CB C:LYS252 4.6 57.7 1.0 C C:LYS252 4.8 57.7 1.0 CE1 C:PHE267 4.8 60.4 1.0 SG C:CYS257 4.8 62.4 1.0 CD1 C:PHE267 4.9 60.4 1.0 N C:LYS252 4.9 57.7 1.0 O C:ALA152 5.0 57.3 1.0

P.Bardy, T.Fuzik, D.Hrebik, R.Pantucek, J.Thomas Beatty, P.Plevka. Structure and Mechanism of Dna Delivery of A Gene Transfer Agent. Nat Commun V. 11 3034 2020.
ISSN: ESSN 2041-1723
PubMed: 32541663
DOI: 10.1038/S41467-020-16669-9