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Iron in PDB 6tsy: Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group

Protein crystallography data

The structure of Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group, PDB code: 6tsy was solved by C.G.Feiler, S.Falke, I.Sarrou, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.76 / 2.25
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 106.019, 109.905, 55.402, 90.00, 100.89, 90.00
R / Rfree (%) 18.8 / 25.1

Iron Binding Sites:

The binding sites of Iron atom in the Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group (pdb code 6tsy). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 6 binding sites of Iron where determined in the Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group, PDB code: 6tsy:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6;

Iron binding site 1 out of 6 in 6tsy

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Iron binding site 1 out of 6 in the Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:17.5
occ:1.00
FE A:HEC201 0.0 17.5 1.0
NA A:HEC201 2.0 11.7 1.0
NC A:HEC201 2.0 17.9 1.0
NE2 A:HIS43 2.1 19.3 1.0
ND A:HEC201 2.1 15.0 1.0
NB A:HEC201 2.1 20.1 1.0
SD A:MET83 2.5 27.9 1.0
CE1 A:HIS43 3.0 18.3 1.0
C4C A:HEC201 3.0 23.6 1.0
C1D A:HEC201 3.0 16.1 1.0
C4A A:HEC201 3.0 17.0 1.0
C1B A:HEC201 3.0 19.0 1.0
C1A A:HEC201 3.1 21.9 1.0
C1C A:HEC201 3.1 20.6 1.0
C4D A:HEC201 3.1 15.4 1.0
CD2 A:HIS43 3.1 22.1 1.0
HE1 A:HIS43 3.1 21.9 1.0
C4B A:HEC201 3.1 21.8 1.0
CHD A:HEC201 3.3 16.4 1.0
HD2 A:HIS43 3.3 26.4 1.0
CHB A:HEC201 3.4 14.0 1.0
HG3 A:MET83 3.4 30.4 1.0
CHA A:HEC201 3.5 11.7 1.0
CHC A:HEC201 3.5 18.9 1.0
HB2 A:MET83 3.5 27.0 1.0
CG A:MET83 3.5 25.4 1.0
CE A:MET83 3.6 23.1 1.0
HE3 A:MET83 3.7 27.6 1.0
HE1 A:MET83 3.7 27.6 1.0
CB A:MET83 4.0 22.6 1.0
ND1 A:HIS43 4.1 23.4 1.0
C3C A:HEC201 4.2 19.4 1.0
HD21 A:LEU56 4.2 45.9 1.0
CG A:HIS43 4.2 19.9 1.0
C3A A:HEC201 4.3 18.9 1.0
C2A A:HEC201 4.3 21.3 1.0
C2D A:HEC201 4.3 20.2 1.0
C2C A:HEC201 4.3 20.3 1.0
C3D A:HEC201 4.3 23.4 1.0
C2B A:HEC201 4.3 20.6 1.0
C3B A:HEC201 4.3 18.9 1.0
HG2 A:MET83 4.4 30.4 1.0
HE2 A:MET83 4.5 27.6 1.0
HE21 A:GLN75 4.5 26.5 1.0
HA A:MET83 4.7 28.9 1.0
HB3 A:MET83 4.7 27.0 1.0
HD21 A:ASN48 4.9 27.3 1.0
HD1 A:HIS43 4.9 28.0 1.0
HB2 A:CYS42 4.9 36.7 1.0

Iron binding site 2 out of 6 in 6tsy

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Iron binding site 2 out of 6 in the Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:19.9
occ:1.00
FE B:HEC201 0.0 19.9 1.0
ND B:HEC201 2.0 23.5 1.0
NE2 B:HIS43 2.1 24.8 1.0
NC B:HEC201 2.1 24.7 1.0
NA B:HEC201 2.1 19.8 1.0
NB B:HEC201 2.1 19.9 1.0
SD B:MET83 2.4 32.1 1.0
C1D B:HEC201 3.0 24.7 1.0
CE1 B:HIS43 3.0 21.5 1.0
C4C B:HEC201 3.0 23.9 1.0
C4D B:HEC201 3.1 28.9 1.0
C4A B:HEC201 3.1 25.0 1.0
CD2 B:HIS43 3.1 28.3 1.0
C1B B:HEC201 3.1 26.7 1.0
C1C B:HEC201 3.1 25.7 1.0
C1A B:HEC201 3.1 25.0 1.0
C4B B:HEC201 3.2 26.7 1.0
HE1 B:HIS43 3.2 25.7 1.0
HG3 B:MET83 3.2 35.8 1.0
CHD B:HEC201 3.3 34.2 1.0
HD2 B:HIS43 3.3 33.9 1.0
CG B:MET83 3.4 29.9 1.0
CHB B:HEC201 3.4 19.0 1.0
CE B:MET83 3.5 26.6 1.0
HE1 B:MET83 3.5 31.8 1.0
CHA B:HEC201 3.5 26.2 1.0
CHC B:HEC201 3.5 22.0 1.0
HB2 B:MET83 3.6 37.8 1.0
HE3 B:MET83 3.6 31.8 1.0
CB B:MET83 4.1 31.6 1.0
ND1 B:HIS43 4.1 24.6 1.0
HG2 B:MET83 4.2 35.8 1.0
C2D B:HEC201 4.2 32.3 1.0
CG B:HIS43 4.2 27.1 1.0
C3D B:HEC201 4.2 28.4 1.0
C3C B:HEC201 4.3 30.9 1.0
C2C B:HEC201 4.3 29.7 1.0
HE2 B:MET83 4.3 31.8 1.0
C3A B:HEC201 4.3 23.5 1.0
C2A B:HEC201 4.4 25.1 1.0
C2B B:HEC201 4.4 18.6 1.0
C3B B:HEC201 4.4 25.1 1.0
HE21 B:GLN75 4.5 43.6 1.0
HD21 B:LEU56 4.5 30.0 1.0
HA B:MET83 4.7 41.1 1.0
HB3 B:MET83 4.7 37.8 1.0
HD21 B:ASN48 4.8 38.4 1.0
HB2 B:CYS42 4.8 46.6 1.0
HD1 B:HIS43 4.9 29.4 1.0

Iron binding site 3 out of 6 in 6tsy

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Iron binding site 3 out of 6 in the Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe201

b:24.6
occ:1.00
FE C:HEC201 0.0 24.6 1.0
NB C:HEC201 1.9 30.3 1.0
NC C:HEC201 2.0 29.1 1.0
ND C:HEC201 2.1 26.4 1.0
NA C:HEC201 2.1 32.6 1.0
NE2 C:HIS43 2.2 22.3 1.0
SD C:MET83 2.2 28.1 1.0
C1B C:HEC201 2.9 32.5 1.0
CD2 C:HIS43 3.0 25.5 1.0
C4B C:HEC201 3.0 39.5 1.0
C4C C:HEC201 3.0 27.8 1.0
C1C C:HEC201 3.0 28.4 1.0
C4A C:HEC201 3.1 30.0 1.0
C1D C:HEC201 3.1 31.6 1.0
C4D C:HEC201 3.2 30.6 1.0
C1A C:HEC201 3.2 29.2 1.0
CE1 C:HIS43 3.3 30.7 1.0
CHB C:HEC201 3.3 34.4 1.0
CE C:MET83 3.3 38.7 1.0
HB2 C:MET83 3.4 43.9 1.0
CHC C:HEC201 3.4 31.0 1.0
CHD C:HEC201 3.4 32.3 1.0
HE1 C:MET83 3.4 46.4 1.0
HE3 C:MET83 3.5 46.4 1.0
CG C:MET83 3.5 36.3 1.0
CHA C:HEC201 3.6 21.6 1.0
HG3 C:MET83 3.7 43.5 1.0
CB C:MET83 4.0 36.6 1.0
C2B C:HEC201 4.2 31.9 1.0
HE2 C:MET83 4.2 46.4 1.0
C3B C:HEC201 4.2 28.4 1.0
CG C:HIS43 4.2 32.3 1.0
C3C C:HEC201 4.2 36.9 1.0
C2C C:HEC201 4.2 32.7 1.0
C2D C:HEC201 4.3 27.8 1.0
HG2 C:MET83 4.3 43.5 1.0
ND1 C:HIS43 4.3 28.9 1.0
C3A C:HEC201 4.3 25.4 1.0
C3D C:HEC201 4.4 23.5 1.0
HD21 C:LEU56 4.4 40.2 1.0
C2A C:HEC201 4.4 22.0 1.0
HB3 C:MET83 4.6 43.9 1.0
HA C:MET83 4.8 34.1 1.0
HE21 C:GLN75 4.9 35.6 1.0
HB2 C:CYS42 4.9 47.3 1.0
HD2 C:PRO84 5.0 45.9 1.0

Iron binding site 4 out of 6 in 6tsy

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Iron binding site 4 out of 6 in the Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe201

b:21.9
occ:1.00
FE D:HEC201 0.0 21.9 1.0
NA D:HEC201 2.0 33.0 1.0
ND D:HEC201 2.0 35.1 1.0
NE2 D:HIS43 2.1 28.3 1.0
NC D:HEC201 2.1 29.9 1.0
NB D:HEC201 2.1 23.2 1.0
SD D:MET83 2.4 24.8 1.0
CD2 D:HIS43 2.9 33.0 1.0
C4D D:HEC201 3.0 29.5 1.0
C1A D:HEC201 3.0 28.8 1.0
C4A D:HEC201 3.0 34.9 1.0
C1D D:HEC201 3.1 31.8 1.0
HD2 D:HIS43 3.1 39.5 1.0
C4C D:HEC201 3.1 27.2 1.0
C4B D:HEC201 3.1 30.9 1.0
C1C D:HEC201 3.1 26.8 1.0
HG3 D:MET83 3.1 33.7 1.0
CE1 D:HIS43 3.1 27.7 1.0
C1B D:HEC201 3.1 24.1 1.0
CG D:MET83 3.3 28.1 1.0
CHA D:HEC201 3.3 26.3 1.0
HE1 D:HIS43 3.4 33.2 1.0
CHB D:HEC201 3.4 25.7 1.0
CHD D:HEC201 3.5 23.0 1.0
CHC D:HEC201 3.5 27.7 1.0
HE3 D:MET83 3.6 34.8 1.0
CE D:MET83 3.6 29.1 1.0
HB2 D:MET83 3.6 38.6 1.0
HE1 D:MET83 3.9 34.8 1.0
CB D:MET83 4.1 32.3 1.0
CG D:HIS43 4.1 21.4 1.0
HG2 D:MET83 4.1 33.7 1.0
ND1 D:HIS43 4.2 26.5 1.0
C3D D:HEC201 4.2 33.1 1.0
C2D D:HEC201 4.2 32.8 1.0
C2A D:HEC201 4.2 31.4 1.0
C3A D:HEC201 4.3 32.5 1.0
C3C D:HEC201 4.3 21.7 1.0
C2C D:HEC201 4.3 32.6 1.0
C3B D:HEC201 4.3 27.2 1.0
C2B D:HEC201 4.4 30.9 1.0
HE2 D:MET83 4.4 34.8 1.0
HD21 D:LEU56 4.5 37.6 1.0
HB3 D:MET83 4.7 38.6 1.0
HD21 D:ASN48 4.7 43.1 1.0
HA D:MET83 4.9 33.8 1.0
HD1 D:HIS43 5.0 31.8 1.0

Iron binding site 5 out of 6 in 6tsy

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Iron binding site 5 out of 6 in the Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Fe201

b:29.9
occ:1.00
FE E:HEC201 0.0 29.9 1.0
ND E:HEC201 2.0 30.2 1.0
NB E:HEC201 2.0 29.9 1.0
NC E:HEC201 2.1 32.2 1.0
NA E:HEC201 2.1 35.3 1.0
NE2 E:HIS43 2.1 34.5 1.0
SD E:MET83 2.5 34.3 1.0
C4B E:HEC201 2.9 30.2 1.0
CD2 E:HIS43 3.0 36.6 1.0
C4D E:HEC201 3.0 38.4 1.0
C1C E:HEC201 3.0 29.0 1.0
C1D E:HEC201 3.0 29.8 1.0
HD2 E:HIS43 3.0 43.8 1.0
C1A E:HEC201 3.1 33.5 1.0
HG3 E:MET83 3.1 43.3 1.0
C1B E:HEC201 3.1 37.5 1.0
C4C E:HEC201 3.1 27.8 1.0
C4A E:HEC201 3.1 32.4 1.0
CE1 E:HIS43 3.2 38.1 1.0
CHC E:HEC201 3.3 28.0 1.0
CG E:MET83 3.3 36.1 1.0
CHA E:HEC201 3.4 26.6 1.0
CHD E:HEC201 3.5 33.2 1.0
HE1 E:HIS43 3.5 45.7 1.0
CE E:MET83 3.5 37.0 1.0
CHB E:HEC201 3.5 35.9 1.0
HE3 E:MET83 3.5 44.3 1.0
HE1 E:MET83 3.5 44.3 1.0
HB2 E:MET83 3.6 39.0 1.0
CB E:MET83 4.0 32.6 1.0
HG2 E:MET83 4.2 43.3 1.0
C3D E:HEC201 4.2 33.8 1.0
CG E:HIS43 4.2 40.3 1.0
C3B E:HEC201 4.2 34.1 1.0
C2D E:HEC201 4.2 34.0 1.0
ND1 E:HIS43 4.3 33.6 1.0
C2C E:HEC201 4.3 33.4 1.0
C2B E:HEC201 4.3 25.1 1.0
C2A E:HEC201 4.3 42.7 1.0
C3C E:HEC201 4.3 36.4 1.0
C3A E:HEC201 4.3 34.6 1.0
HE2 E:MET83 4.4 44.3 1.0
HD21 E:LEU56 4.4 54.6 1.0
HB3 E:MET83 4.6 39.0 1.0
HD21 E:ASN48 4.9 38.0 1.0

Iron binding site 6 out of 6 in 6tsy

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Iron binding site 6 out of 6 in the Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Cytochrome C6 From Thermosynechococcus Elongatus in A Monoclinic Space Group within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Fe201

b:20.6
occ:1.00
FE F:HEC201 0.0 20.6 1.0
NB F:HEC201 2.0 30.7 1.0
NE2 F:HIS43 2.0 22.5 1.0
NA F:HEC201 2.0 31.6 1.0
ND F:HEC201 2.0 32.4 1.0
NC F:HEC201 2.1 29.8 1.0
SD F:MET83 2.3 24.9 1.0
CE1 F:HIS43 3.0 30.4 1.0
C4A F:HEC201 3.0 24.2 1.0
C1B F:HEC201 3.0 32.1 1.0
C4B F:HEC201 3.0 24.1 1.0
CD2 F:HIS43 3.0 26.8 1.0
C4D F:HEC201 3.1 31.0 1.0
C1A F:HEC201 3.1 28.1 1.0
C1D F:HEC201 3.1 32.6 1.0
C1C F:HEC201 3.1 24.9 1.0
C4C F:HEC201 3.1 29.0 1.0
CHB F:HEC201 3.4 28.7 1.0
CE F:MET83 3.4 17.6 1.0
CHC F:HEC201 3.4 24.7 1.0
CHA F:HEC201 3.4 29.1 1.0
CHD F:HEC201 3.5 26.4 1.0
CG F:MET83 3.6 27.0 1.0
CB F:MET83 4.1 27.9 1.0
ND1 F:HIS43 4.1 26.2 1.0
CG F:HIS43 4.2 24.4 1.0
HD21 F:LEU56 4.2 39.2 1.0
C3B F:HEC201 4.2 22.9 1.0
C2B F:HEC201 4.2 23.9 1.0
C3A F:HEC201 4.2 32.8 1.0
C3D F:HEC201 4.3 24.9 1.0
C2A F:HEC201 4.3 28.6 1.0
C2D F:HEC201 4.3 30.1 1.0
C2C F:HEC201 4.3 31.4 1.0
C3C F:HEC201 4.3 32.4 1.0
HE21 F:GLN75 4.7 38.1 1.0

Reference:

S.Falke, C.G.Feiler, I.Sarrou. Cytochrome C6 From Thermosynechococcus Elongatus To Be Published.
Page generated: Wed Aug 7 11:35:54 2024

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