Iron in PDB 6ukl: Crystal Structure of A DIB2-Split Protein

Protein crystallography data

The structure of Crystal Structure of A DIB2-Split Protein, PDB code: 6ukl was solved by N.G.Bozhanova, J.Meiler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 72.10 / 2.02
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 68.241, 68.241, 216.292, 90.00, 90.00, 120.00
R / Rfree (%) 20.5 / 24.8

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of A DIB2-Split Protein (pdb code 6ukl). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of A DIB2-Split Protein, PDB code: 6ukl:

Iron binding site 1 out of 1 in 6ukl

Go back to Iron Binding Sites List in 6ukl
Iron binding site 1 out of 1 in the Crystal Structure of A DIB2-Split Protein


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of A DIB2-Split Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Fe203

b:32.3
occ:0.50
FE E:HEM203 0.0 32.3 0.5
ND E:HEM203 1.9 51.7 1.0
NA E:HEM203 2.0 52.1 1.0
NB E:HEM203 2.1 45.9 1.0
NC E:HEM203 2.1 47.1 1.0
C4D E:HEM203 2.9 52.7 1.0
C1D E:HEM203 2.9 52.2 1.0
C1A E:HEM203 3.0 53.2 1.0
C4A E:HEM203 3.1 56.6 1.0
C4B E:HEM203 3.1 45.7 1.0
C4C E:HEM203 3.1 45.3 1.0
C1B E:HEM203 3.1 50.3 1.0
C1C E:HEM203 3.1 44.4 1.0
CHA E:HEM203 3.4 52.4 1.0
CHD E:HEM203 3.4 49.6 1.0
CE1 E:PHE53 3.4 49.7 1.0
CHB E:HEM203 3.5 53.5 1.0
CHC E:HEM203 3.5 42.4 1.0
CD1 E:PHE53 3.8 50.2 1.0
OD1 E:ASN76 3.9 36.1 1.0
C3D E:HEM203 4.2 54.6 1.0
CZ E:PHE53 4.2 52.0 1.0
C2D E:HEM203 4.2 56.2 1.0
C2A E:HEM203 4.2 56.1 1.0
C3A E:HEM203 4.3 53.1 1.0
C3C E:HEM203 4.3 42.3 1.0
C2B E:HEM203 4.3 49.7 1.0
C3B E:HEM203 4.3 51.4 1.0
C2C E:HEM203 4.3 41.6 1.0
CG E:ASN76 4.7 35.4 1.0
CG E:PHE53 4.8 50.4 1.0

Reference:

N.G.Bozhanova, A.S.Gavrikov, A.S.Mishin, J.Meiler. Dib-Splits: Nature-Guided Design of A Novel Fluorescent Labeling Split System. Sci Rep V. 10 11049 2020.
ISSN: ESSN 2045-2322
PubMed: 32632329
DOI: 10.1038/S41598-020-67095-2
Page generated: Sun Dec 13 17:15:37 2020

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