Iron in PDB 6urb: Pseudomonas Aeruginosa Hasa Mutant - H32A
Protein crystallography data
The structure of Pseudomonas Aeruginosa Hasa Mutant - H32A, PDB code: 6urb
was solved by
M.Brimberry,
W.Lanzilotta,
A.Wilks,
A.Dent,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
29.89 /
2.10
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
111.340,
51.867,
72.811,
90.00,
130.67,
90.00
|
R / Rfree (%)
|
23.3 /
30.2
|
Iron Binding Sites:
The binding sites of Iron atom in the Pseudomonas Aeruginosa Hasa Mutant - H32A
(pdb code 6urb). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
Pseudomonas Aeruginosa Hasa Mutant - H32A, PDB code: 6urb:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 6urb
Go back to
Iron Binding Sites List in 6urb
Iron binding site 1 out
of 2 in the Pseudomonas Aeruginosa Hasa Mutant - H32A
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Pseudomonas Aeruginosa Hasa Mutant - H32A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe301
b:32.5
occ:1.00
|
FE
|
A:HEM301
|
0.0
|
32.5
|
1.0
|
NB
|
A:HEM301
|
2.0
|
28.6
|
1.0
|
NA
|
A:HEM301
|
2.0
|
37.1
|
1.0
|
ND
|
A:HEM301
|
2.0
|
24.8
|
1.0
|
NC
|
A:HEM301
|
2.1
|
26.8
|
1.0
|
OH
|
A:TYR75
|
2.3
|
26.9
|
1.0
|
C4A
|
A:HEM301
|
3.0
|
33.6
|
1.0
|
C1B
|
A:HEM301
|
3.0
|
34.6
|
1.0
|
C1D
|
A:HEM301
|
3.0
|
34.2
|
1.0
|
C4D
|
A:HEM301
|
3.0
|
36.6
|
1.0
|
C1A
|
A:HEM301
|
3.0
|
33.0
|
1.0
|
C4B
|
A:HEM301
|
3.0
|
33.0
|
1.0
|
C4C
|
A:HEM301
|
3.1
|
26.2
|
1.0
|
C1C
|
A:HEM301
|
3.1
|
29.6
|
1.0
|
CZ
|
A:TYR75
|
3.1
|
28.5
|
1.0
|
CHB
|
A:HEM301
|
3.4
|
32.6
|
1.0
|
CHD
|
A:HEM301
|
3.4
|
28.1
|
1.0
|
CHA
|
A:HEM301
|
3.4
|
32.8
|
1.0
|
CHC
|
A:HEM301
|
3.5
|
33.7
|
1.0
|
CHB
|
B:HEM301
|
3.6
|
30.8
|
1.0
|
ND1
|
A:HIS83
|
3.8
|
36.1
|
1.0
|
CE1
|
A:TYR75
|
3.8
|
25.5
|
1.0
|
C4A
|
B:HEM301
|
3.8
|
32.6
|
1.0
|
CE2
|
A:TYR75
|
3.9
|
28.0
|
1.0
|
C1B
|
B:HEM301
|
4.1
|
32.6
|
1.0
|
C3A
|
B:HEM301
|
4.2
|
34.7
|
1.0
|
C3A
|
A:HEM301
|
4.2
|
40.2
|
1.0
|
C2B
|
A:HEM301
|
4.2
|
30.2
|
1.0
|
C2D
|
A:HEM301
|
4.2
|
39.8
|
1.0
|
C3D
|
A:HEM301
|
4.2
|
39.4
|
1.0
|
C2A
|
A:HEM301
|
4.2
|
37.9
|
1.0
|
C3B
|
A:HEM301
|
4.2
|
31.9
|
1.0
|
C3C
|
A:HEM301
|
4.3
|
31.7
|
1.0
|
CMA
|
B:HEM301
|
4.3
|
33.4
|
1.0
|
C2C
|
A:HEM301
|
4.3
|
32.4
|
1.0
|
NA
|
B:HEM301
|
4.5
|
38.1
|
1.0
|
CG
|
A:HIS83
|
4.5
|
40.4
|
1.0
|
CE1
|
A:HIS83
|
4.6
|
39.4
|
1.0
|
CB
|
A:HIS83
|
4.6
|
33.8
|
1.0
|
C2B
|
B:HEM301
|
4.7
|
30.9
|
1.0
|
NB
|
B:HEM301
|
4.7
|
31.9
|
1.0
|
C2A
|
B:HEM301
|
4.9
|
39.4
|
1.0
|
CMB
|
B:HEM301
|
4.9
|
32.7
|
1.0
|
CD1
|
A:TYR75
|
5.0
|
27.5
|
1.0
|
|
Iron binding site 2 out
of 2 in 6urb
Go back to
Iron Binding Sites List in 6urb
Iron binding site 2 out
of 2 in the Pseudomonas Aeruginosa Hasa Mutant - H32A
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Pseudomonas Aeruginosa Hasa Mutant - H32A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe301
b:35.5
occ:1.00
|
FE
|
B:HEM301
|
0.0
|
35.5
|
1.0
|
NA
|
B:HEM301
|
2.0
|
38.1
|
1.0
|
NB
|
B:HEM301
|
2.0
|
31.9
|
1.0
|
ND
|
B:HEM301
|
2.1
|
41.9
|
1.0
|
NC
|
B:HEM301
|
2.1
|
31.0
|
1.0
|
OH
|
B:TYR75
|
2.2
|
28.9
|
1.0
|
C4A
|
B:HEM301
|
2.9
|
32.6
|
1.0
|
C1B
|
B:HEM301
|
3.0
|
32.6
|
1.0
|
CZ
|
B:TYR75
|
3.0
|
31.8
|
1.0
|
C1D
|
B:HEM301
|
3.0
|
37.5
|
1.0
|
C1A
|
B:HEM301
|
3.1
|
37.1
|
1.0
|
C4C
|
B:HEM301
|
3.1
|
29.1
|
1.0
|
C4D
|
B:HEM301
|
3.1
|
39.6
|
1.0
|
C4B
|
B:HEM301
|
3.1
|
33.8
|
1.0
|
C1C
|
B:HEM301
|
3.2
|
25.4
|
1.0
|
CHB
|
B:HEM301
|
3.3
|
30.8
|
1.0
|
CHD
|
B:HEM301
|
3.4
|
36.1
|
1.0
|
CHA
|
B:HEM301
|
3.5
|
39.5
|
1.0
|
CHC
|
B:HEM301
|
3.6
|
26.5
|
1.0
|
C3A
|
A:HEM301
|
3.6
|
40.2
|
1.0
|
C2A
|
A:HEM301
|
3.6
|
37.9
|
1.0
|
CE1
|
B:TYR75
|
3.7
|
27.1
|
1.0
|
CE2
|
B:TYR75
|
3.8
|
27.0
|
1.0
|
C4A
|
A:HEM301
|
3.9
|
33.6
|
1.0
|
C1A
|
A:HEM301
|
4.0
|
33.0
|
1.0
|
ND1
|
B:HIS83
|
4.0
|
30.0
|
1.0
|
CMA
|
A:HEM301
|
4.1
|
44.4
|
1.0
|
CAA
|
A:HEM301
|
4.1
|
46.4
|
1.0
|
NA
|
A:HEM301
|
4.1
|
37.1
|
1.0
|
C3A
|
B:HEM301
|
4.2
|
34.7
|
1.0
|
C2B
|
B:HEM301
|
4.2
|
30.9
|
1.0
|
C2A
|
B:HEM301
|
4.2
|
39.4
|
1.0
|
C2D
|
B:HEM301
|
4.3
|
45.4
|
1.0
|
C3B
|
B:HEM301
|
4.3
|
33.3
|
1.0
|
C3D
|
B:HEM301
|
4.3
|
43.0
|
1.0
|
C3C
|
B:HEM301
|
4.3
|
35.1
|
1.0
|
C2C
|
B:HEM301
|
4.4
|
35.3
|
1.0
|
CHB
|
A:HEM301
|
4.6
|
32.6
|
1.0
|
CHA
|
A:HEM301
|
4.6
|
32.8
|
1.0
|
CB
|
B:HIS83
|
4.7
|
30.5
|
1.0
|
CG
|
B:HIS83
|
4.7
|
34.3
|
1.0
|
CE1
|
B:HIS83
|
4.9
|
33.8
|
1.0
|
CD1
|
B:TYR75
|
4.9
|
26.0
|
1.0
|
CD2
|
B:TYR75
|
4.9
|
29.8
|
1.0
|
CD1
|
B:LEU77
|
5.0
|
27.1
|
0.2
|
|
Reference:
M.Brimberry,
W.Lanzilotta.
Crystal Structure of Pseudomonas Aeruginosa Hasa Mutant H32A To Be Published.
Page generated: Wed Aug 7 12:38:54 2024
|