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Iron in PDB 6vri: Crystal Structure of the Wtblc-Split Protein

Protein crystallography data

The structure of Crystal Structure of the Wtblc-Split Protein, PDB code: 6vri was solved by N.G.Bozhanova, J.Meiler, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 59.25 / 1.94
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 68.416, 68.416, 217.748, 90.00, 90.00, 120.00
R / Rfree (%) 21.2 / 24.9

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the Wtblc-Split Protein (pdb code 6vri). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of the Wtblc-Split Protein, PDB code: 6vri:

Iron binding site 1 out of 1 in 6vri

Go back to Iron Binding Sites List in 6vri
Iron binding site 1 out of 1 in the Crystal Structure of the Wtblc-Split Protein


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Wtblc-Split Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe201

b:34.6
occ:1.00
FE D:HEM201 0.0 34.6 1.0
ND D:HEM201 1.9 32.6 1.0
NA D:HEM201 2.0 36.9 1.0
NB D:HEM201 2.1 34.9 1.0
NC D:HEM201 2.1 34.1 1.0
C4D D:HEM201 2.9 36.4 1.0
C1D D:HEM201 2.9 33.0 1.0
C1A D:HEM201 3.0 38.7 1.0
C1B D:HEM201 3.1 38.1 1.0
C4C D:HEM201 3.1 32.4 1.0
C4A D:HEM201 3.1 40.8 1.0
C4B D:HEM201 3.1 33.2 1.0
C1C D:HEM201 3.2 32.0 1.0
CHA D:HEM201 3.4 35.8 1.0
CHD D:HEM201 3.4 33.2 1.0
CHB D:HEM201 3.4 40.2 1.0
CE1 E:PHE53 3.4 33.4 1.0
CHC D:HEM201 3.5 33.1 1.0
CD1 E:PHE53 3.8 34.4 1.0
OD1 E:ASN76 3.9 30.0 1.0
CZ E:PHE53 4.1 31.9 1.0
C3D D:HEM201 4.2 32.4 1.0
C2D D:HEM201 4.2 33.4 1.0
C2A D:HEM201 4.3 39.1 1.0
C3A D:HEM201 4.3 38.0 1.0
C2B D:HEM201 4.3 36.8 1.0
C3C D:HEM201 4.3 32.4 1.0
C3B D:HEM201 4.3 32.9 1.0
C2C D:HEM201 4.4 32.7 1.0
CG E:ASN76 4.7 27.2 1.0
CG E:PHE53 4.8 36.1 1.0

Reference:

N.G.Bozhanova, M.W.Calcutt, W.N.Beavers, B.P.Brown, E.P.Skaar, J.Meiler. Lipocalin Blc Is A Potential Heme-Binding Protein. Febs Lett. 2020.
ISSN: ISSN 0014-5793
PubMed: 33210733
DOI: 10.1002/1873-3468.14001
Page generated: Wed Aug 7 13:34:02 2024

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