Iron in PDB 6vz6: Methanococcoides Burtonii Cytochrome B5 Domain Protein (Wp 011499504.1)

Protein crystallography data

The structure of Methanococcoides Burtonii Cytochrome B5 Domain Protein (Wp 011499504.1), PDB code: 6vz6 was solved by S.L.Teakel, J.K.Forwood, D.Aragao, M.A.Cahill, M.Marama, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.86 / 2.10
Space group P 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 67.495, 67.495, 48.132, 90.00, 90.00, 90.00
R / Rfree (%) 16.2 / 19.5

Iron Binding Sites:

The binding sites of Iron atom in the Methanococcoides Burtonii Cytochrome B5 Domain Protein (Wp 011499504.1) (pdb code 6vz6). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Methanococcoides Burtonii Cytochrome B5 Domain Protein (Wp 011499504.1), PDB code: 6vz6:

Iron binding site 1 out of 1 in 6vz6

Go back to Iron Binding Sites List in 6vz6
Iron binding site 1 out of 1 in the Methanococcoides Burtonii Cytochrome B5 Domain Protein (Wp 011499504.1)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Methanococcoides Burtonii Cytochrome B5 Domain Protein (Wp 011499504.1) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe101

b:16.0
occ:1.00
FE A:HEM101 0.0 16.0 1.0
NA A:HEM101 2.0 19.3 1.0
ND A:HEM101 2.0 17.4 1.0
NB A:HEM101 2.0 17.8 1.0
NC A:HEM101 2.0 17.1 1.0
NE2 A:HIS61 2.1 15.3 1.0
NE2 A:HIS42 2.1 15.7 1.0
C1B A:HEM101 3.0 19.9 1.0
C4A A:HEM101 3.0 18.3 1.0
C1A A:HEM101 3.0 21.2 1.0
C4D A:HEM101 3.0 17.1 1.0
C1D A:HEM101 3.0 19.7 1.0
C4C A:HEM101 3.0 14.6 1.0
CD2 A:HIS61 3.0 17.2 1.0
CE1 A:HIS42 3.0 19.1 1.0
C1C A:HEM101 3.1 17.5 1.0
CE1 A:HIS61 3.1 18.4 1.0
C4B A:HEM101 3.1 17.8 1.0
CD2 A:HIS42 3.1 16.5 1.0
HD2 A:HIS61 3.2 20.7 1.0
HE1 A:HIS42 3.2 22.9 1.0
HD2 A:HIS42 3.3 19.8 1.0
HE1 A:HIS61 3.3 22.1 1.0
CHB A:HEM101 3.3 16.0 1.0
CHA A:HEM101 3.4 21.0 1.0
CHD A:HEM101 3.4 13.3 1.0
CHC A:HEM101 3.5 15.7 1.0
HB1 A:ALA59 4.1 25.9 1.0
ND1 A:HIS42 4.2 16.6 1.0
ND1 A:HIS61 4.2 21.9 1.0
CG A:HIS61 4.2 16.0 1.0
C2B A:HEM101 4.2 23.1 1.0
C3A A:HEM101 4.2 23.6 1.0
C2A A:HEM101 4.2 22.0 1.0
C2D A:HEM101 4.2 18.0 1.0
CG A:HIS42 4.2 17.4 1.0
C3D A:HEM101 4.2 16.5 1.0
C3C A:HEM101 4.3 14.9 1.0
C3B A:HEM101 4.3 20.1 1.0
C2C A:HEM101 4.3 19.4 1.0
HD2 A:PRO60 4.3 20.9 1.0
HHB A:HEM101 4.3 19.2 1.0
HHA A:HEM101 4.4 25.3 1.0
HHD A:HEM101 4.4 16.0 1.0
HHC A:HEM101 4.4 18.8 1.0
HG21 A:VAL65 4.5 22.5 1.0
HZ2 A:TRP37 4.6 18.0 1.0
HE1 A:TRP37 4.7 23.5 1.0
HG3 A:GLN43 4.7 25.9 1.0
HB2 A:ALA59 4.8 25.9 1.0
CB A:ALA59 4.9 21.5 1.0
HD1 A:HIS42 4.9 20.0 1.0
HD1 A:HIS61 5.0 26.3 1.0

Reference:

S.L.Teakel, J.K.Forwood, D.Aragao, M.A.Cahill, M.Marama. Methanococcoides Burtonii Cytochrome B5 Domain Protein (Wp 011499504.1) To Be Published.
Page generated: Sun Dec 13 17:23:52 2020

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