Iron in PDB 6x0q: A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme

The structure of A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme, PDB code: 6x0q was solved by J.Dai, G.J.Knott, M.B.Francis, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.56 / 3.00
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	218.015, 176.136, 100.235, 90.00, 98.53, 90.00
R / Rfree (%)	25.7 / 26.5

The binding sites of Iron atom in the A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme (pdb code 6x0q). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 9 binding sites of Iron where determined in the A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme, PDB code: 6x0q:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9;

Iron binding site 1 out of 9 in the A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe201 b:59.7 occ:0.89 FE C:HEM201 0.0 59.7 0.9 NC C:HEM201 2.1 62.6 0.9 NB C:HEM201 2.1 64.5 0.9 ND C:HEM201 2.1 74.1 0.9 NA C:HEM201 2.1 66.7 0.9 NE2 C:HIS101 2.6 39.4 1.0 CD2 C:HIS101 3.0 39.4 1.0 C1C C:HEM201 3.0 62.9 0.9 C4C C:HEM201 3.0 63.1 0.9 C1B C:HEM201 3.1 62.5 0.9 C1D C:HEM201 3.1 67.4 0.9 C4B C:HEM201 3.1 60.6 0.9 C4A C:HEM201 3.1 67.4 0.9 C1A C:HEM201 3.1 70.5 0.9 C4D C:HEM201 3.1 71.4 0.9 CHC C:HEM201 3.4 62.8 0.9 CHD C:HEM201 3.4 65.2 0.9 CHB C:HEM201 3.4 64.0 0.9 CHA C:HEM201 3.5 68.4 0.9 CE1 C:HIS101 3.8 39.4 1.0 C2C C:HEM201 4.2 59.3 0.9 C3C C:HEM201 4.2 60.6 0.9 C2B C:HEM201 4.3 63.9 0.9 C2D C:HEM201 4.3 69.8 0.9 C3B C:HEM201 4.3 59.5 0.9 C3A C:HEM201 4.3 68.0 0.9 C2A C:HEM201 4.3 72.8 0.9 C3D C:HEM201 4.3 72.3 0.9 CG C:HIS101 4.3 39.4 1.0 ND1 C:HIS101 4.7 39.4 1.0

Iron binding site 2 out of 9 in the A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme within 5.0Å range: probe atom residue distance (Å) B Occ D:Fe201 b:65.5 occ:0.89 FE D:HEM201 0.0 65.5 0.9 NB D:HEM201 2.1 70.4 0.9 NC D:HEM201 2.1 68.5 0.9 NA D:HEM201 2.1 72.6 0.9 ND D:HEM201 2.1 80.0 0.9 NE2 D:HIS101 2.6 42.6 1.0 C1C D:HEM201 3.0 68.8 0.9 C4C D:HEM201 3.1 68.9 0.9 C1B D:HEM201 3.1 68.3 0.9 C4B D:HEM201 3.1 66.4 0.9 C4A D:HEM201 3.1 73.3 0.9 C1D D:HEM201 3.1 73.3 0.9 C1A D:HEM201 3.1 76.4 0.9 C4D D:HEM201 3.1 77.2 0.9 CD2 D:HIS101 3.2 42.6 1.0 CHC D:HEM201 3.4 68.6 0.9 CHB D:HEM201 3.4 69.8 0.9 CHD D:HEM201 3.4 71.1 0.9 CHA D:HEM201 3.5 74.2 0.9 CE1 D:HIS101 3.8 42.6 1.0 C2C D:HEM201 4.2 65.2 0.9 C3C D:HEM201 4.3 66.5 0.9 C2B D:HEM201 4.3 69.8 0.9 C3B D:HEM201 4.3 65.4 0.9 C3A D:HEM201 4.3 73.8 0.9 C2D D:HEM201 4.3 75.7 0.9 C2A D:HEM201 4.3 78.6 0.9 C3D D:HEM201 4.3 78.1 0.9 CG D:HIS101 4.5 42.6 1.0 ND1 D:HIS101 4.7 42.6 1.0

Iron binding site 3 out of 9 in the A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme within 5.0Å range: probe atom residue distance (Å) B Occ G:Fe201 b:62.0 occ:0.88 FE G:HEM201 0.0 62.0 0.9 NC G:HEM201 2.1 65.0 0.9 NB G:HEM201 2.1 66.9 0.9 ND G:HEM201 2.1 76.5 0.9 NA G:HEM201 2.1 69.1 0.9 NE2 G:HIS101 2.6 40.9 1.0 CD2 G:HIS101 2.9 40.9 1.0 C1C G:HEM201 3.0 65.3 0.9 C4C G:HEM201 3.0 65.5 0.9 C1D G:HEM201 3.1 69.8 0.9 C1B G:HEM201 3.1 64.9 0.9 C4B G:HEM201 3.1 62.9 0.9 C4A G:HEM201 3.1 69.8 0.9 C4D G:HEM201 3.1 73.8 0.9 C1A G:HEM201 3.1 72.9 0.9 CHC G:HEM201 3.4 65.1 0.9 CHD G:HEM201 3.4 67.6 0.9 CHB G:HEM201 3.4 66.3 0.9 CHA G:HEM201 3.5 70.7 0.9 CE1 G:HIS101 3.9 40.9 1.0 C2C G:HEM201 4.2 61.7 0.9 C3C G:HEM201 4.2 63.0 0.9 CG G:HIS101 4.3 40.9 1.0 C2D G:HEM201 4.3 72.2 0.9 C2B G:HEM201 4.3 66.3 0.9 C3A G:HEM201 4.3 70.3 0.9 C2A G:HEM201 4.3 75.1 0.9 C3D G:HEM201 4.3 74.6 0.9 C3B G:HEM201 4.3 61.9 0.9 ND1 G:HIS101 4.7 40.9 1.0

Iron binding site 4 out of 9 in the A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme within 5.0Å range: probe atom residue distance (Å) B Occ J:Fe201 b:58.8 occ:0.83 FE J:HEM201 0.0 58.8 0.8 NC J:HEM201 2.1 61.8 0.8 NB J:HEM201 2.1 63.7 0.8 NA J:HEM201 2.1 65.9 0.8 ND J:HEM201 2.1 73.3 0.8 NE2 J:HIS101 2.6 42.7 1.0 CD2 J:HIS101 3.0 42.7 1.0 C1C J:HEM201 3.0 62.1 0.8 C4C J:HEM201 3.1 62.2 0.8 C1B J:HEM201 3.1 61.6 0.8 C4A J:HEM201 3.1 66.6 0.8 C4B J:HEM201 3.1 59.7 0.8 C1D J:HEM201 3.1 66.6 0.8 C1A J:HEM201 3.1 69.7 0.8 C4D J:HEM201 3.1 70.5 0.8 CHC J:HEM201 3.4 61.9 0.8 CHB J:HEM201 3.4 63.1 0.8 CHD J:HEM201 3.4 64.4 0.8 CHA J:HEM201 3.5 67.5 0.8 CE1 J:HIS101 3.9 42.7 1.0 C2C J:HEM201 4.3 58.5 0.8 C3C J:HEM201 4.3 59.8 0.8 CG J:HIS101 4.3 42.7 1.0 C2B J:HEM201 4.3 63.1 0.8 C3A J:HEM201 4.3 67.1 0.8 C2D J:HEM201 4.3 69.0 0.8 C3B J:HEM201 4.3 58.7 0.8 C2A J:HEM201 4.3 71.9 0.8 C3D J:HEM201 4.3 71.4 0.8 ND1 J:HIS101 4.7 42.7 1.0

Iron binding site 5 out of 9 in the A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme within 5.0Å range: probe atom residue distance (Å) B Occ K:Fe201 b:52.1 occ:0.82 FE K:HEM201 0.0 52.1 0.8 NC K:HEM201 2.1 55.1 0.8 NB K:HEM201 2.1 57.0 0.8 NA K:HEM201 2.1 59.2 0.8 ND K:HEM201 2.1 66.6 0.8 NE2 K:HIS101 2.6 36.5 1.0 C1C K:HEM201 3.0 55.4 0.8 C1B K:HEM201 3.1 54.9 0.8 C4C K:HEM201 3.1 55.5 0.8 C4A K:HEM201 3.1 59.9 0.8 C4B K:HEM201 3.1 53.0 0.8 C1D K:HEM201 3.1 59.9 0.8 C1A K:HEM201 3.1 63.0 0.8 CD2 K:HIS101 3.1 36.5 1.0 C4D K:HEM201 3.1 63.8 0.8 CHC K:HEM201 3.4 55.2 0.8 CHB K:HEM201 3.4 56.4 0.8 CHD K:HEM201 3.4 57.7 0.8 CHA K:HEM201 3.5 60.8 0.8 CE1 K:HIS101 3.8 36.5 1.0 C2C K:HEM201 4.3 51.8 0.8 C3C K:HEM201 4.3 53.1 0.8 C2B K:HEM201 4.3 56.4 0.8 C3A K:HEM201 4.3 60.4 0.8 C2A K:HEM201 4.3 65.2 0.8 C3B K:HEM201 4.3 52.0 0.8 C2D K:HEM201 4.3 62.3 0.8 C3D K:HEM201 4.3 64.7 0.8 CG K:HIS101 4.4 36.5 1.0 ND1 K:HIS101 4.7 36.5 1.0

Iron binding site 6 out of 9 in the A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme within 5.0Å range: probe atom residue distance (Å) B Occ L:Fe201 b:61.6 occ:0.91 FE L:HEM201 0.0 61.6 0.9 NC L:HEM201 2.1 64.5 0.9 NB L:HEM201 2.1 66.4 0.9 NA L:HEM201 2.1 68.7 0.9 ND L:HEM201 2.1 76.0 0.9 NE2 L:HIS101 2.6 45.7 1.0 CD2 L:HIS101 3.0 45.7 1.0 C1C L:HEM201 3.1 64.9 0.9 C1B L:HEM201 3.1 64.4 0.9 C4C L:HEM201 3.1 65.0 0.9 C4A L:HEM201 3.1 69.3 0.9 C4B L:HEM201 3.1 62.5 0.9 C1D L:HEM201 3.1 69.3 0.9 C1A L:HEM201 3.1 72.4 0.9 C4D L:HEM201 3.1 73.3 0.9 CHC L:HEM201 3.4 64.7 0.9 CHB L:HEM201 3.4 65.9 0.9 CHD L:HEM201 3.4 67.2 0.9 CHA L:HEM201 3.5 70.3 0.9 CE1 L:HIS101 3.9 45.7 1.0 C2C L:HEM201 4.3 61.2 0.9 C2B L:HEM201 4.3 65.8 0.9 C3C L:HEM201 4.3 62.6 0.9 C3A L:HEM201 4.3 69.9 0.9 C3B L:HEM201 4.3 61.5 0.9 C2A L:HEM201 4.3 74.7 0.9 CG L:HIS101 4.3 45.7 1.0 C2D L:HEM201 4.3 71.8 0.9 C3D L:HEM201 4.3 74.2 0.9 ND1 L:HIS101 4.7 45.7 1.0

Iron binding site 7 out of 9 in the A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme within 5.0Å range: probe atom residue distance (Å) B Occ N:Fe201 b:54.7 occ:0.86 FE N:HEM201 0.0 54.7 0.9 NB N:HEM201 2.1 59.6 0.9 NC N:HEM201 2.1 57.7 0.9 ND N:HEM201 2.1 69.2 0.9 NA N:HEM201 2.1 61.8 0.9 NE2 N:HIS101 2.6 41.6 1.0 CD2 N:HIS101 3.0 41.6 1.0 C1C N:HEM201 3.0 58.0 0.9 C4C N:HEM201 3.1 58.2 0.9 C1B N:HEM201 3.1 57.6 0.9 C4B N:HEM201 3.1 55.6 0.9 C4A N:HEM201 3.1 62.5 0.9 C1D N:HEM201 3.1 62.5 0.9 C1A N:HEM201 3.1 65.6 0.9 C4D N:HEM201 3.1 66.5 0.9 CHC N:HEM201 3.4 57.9 0.9 CHD N:HEM201 3.4 60.3 0.9 CHB N:HEM201 3.4 59.1 0.9 CHA N:HEM201 3.5 63.4 0.9 CE1 N:HIS101 3.8 41.6 1.0 C2C N:HEM201 4.2 54.4 0.9 C3C N:HEM201 4.3 55.7 0.9 C2B N:HEM201 4.3 59.0 0.9 C3A N:HEM201 4.3 63.0 0.9 C3B N:HEM201 4.3 54.6 0.9 C2D N:HEM201 4.3 64.9 0.9 C2A N:HEM201 4.3 67.8 0.9 C3D N:HEM201 4.3 67.3 0.9 CG N:HIS101 4.3 41.6 1.0 ND1 N:HIS101 4.7 41.6 1.0

Iron binding site 8 out of 9 in the A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme within 5.0Å range: probe atom residue distance (Å) B Occ P:Fe201 b:58.1 occ:0.87 FE P:HEM201 0.0 58.1 0.9 NC P:HEM201 2.1 61.1 0.9 NB P:HEM201 2.1 63.0 0.9 NA P:HEM201 2.1 65.2 0.9 ND P:HEM201 2.1 72.5 0.9 NE2 P:HIS101 2.6 39.0 1.0 CD2 P:HIS101 2.9 39.0 1.0 C1C P:HEM201 3.1 61.4 0.9 C1B P:HEM201 3.1 60.9 0.9 C4C P:HEM201 3.1 61.5 0.9 C4A P:HEM201 3.1 65.8 0.9 C4B P:HEM201 3.1 59.0 0.9 C1D P:HEM201 3.1 65.8 0.9 C1A P:HEM201 3.1 69.0 0.9 C4D P:HEM201 3.1 69.8 0.9 CHC P:HEM201 3.4 61.2 0.9 CHB P:HEM201 3.4 62.4 0.9 CHD P:HEM201 3.4 63.7 0.9 CHA P:HEM201 3.5 66.8 0.9 CE1 P:HIS101 3.8 39.0 1.0 CG P:HIS101 4.3 39.0 1.0 C2C P:HEM201 4.3 57.8 0.9 C2B P:HEM201 4.3 62.4 0.9 C3C P:HEM201 4.3 59.1 0.9 C3A P:HEM201 4.3 66.4 0.9 C3B P:HEM201 4.3 58.0 0.9 C2A P:HEM201 4.3 71.2 0.9 C2D P:HEM201 4.3 68.3 0.9 C3D P:HEM201 4.3 70.7 0.9 ND1 P:HIS101 4.6 39.0 1.0

Iron binding site 9 out of 9 in the A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of A Circular Permutant of the Tobacco Mosaic Virus (Tmv) Mutant Q101H Coordinated with Heme within 5.0Å range: probe atom residue distance (Å) B Occ Q:Fe201 b:62.3 occ:0.46 FE Q:HEM201 0.0 62.3 0.5 NA Q:HEM201 2.1 69.3 0.5 NC Q:HEM201 2.1 65.2 0.5 NB Q:HEM201 2.1 67.1 0.5 ND Q:HEM201 2.1 76.7 0.5 NE2 Q:HIS101 2.6 48.4 1.0 C1C Q:HEM201 3.1 65.5 0.5 C1B Q:HEM201 3.1 65.1 0.5 C4C Q:HEM201 3.1 65.7 0.5 C4A Q:HEM201 3.1 70.0 0.5 C4B Q:HEM201 3.1 63.2 0.5 C1A Q:HEM201 3.1 73.1 0.5 C1D Q:HEM201 3.1 70.0 0.5 C4D Q:HEM201 3.1 74.0 0.5 CD2 Q:HIS101 3.4 48.4 1.0 CHC Q:HEM201 3.4 65.4 0.5 CHB Q:HEM201 3.4 66.6 0.5 CHD Q:HEM201 3.4 67.8 0.5 CHA Q:HEM201 3.4 71.0 0.5 CE1 Q:HIS101 3.8 48.4 1.0 C2C Q:HEM201 4.3 61.9 0.5 C3C Q:HEM201 4.3 63.2 0.5 C2B Q:HEM201 4.3 66.5 0.5 C3A Q:HEM201 4.3 70.5 0.5 C2A Q:HEM201 4.3 75.3 0.5 C2D Q:HEM201 4.3 72.4 0.5 C3B Q:HEM201 4.3 62.1 0.5 C3D Q:HEM201 4.3 74.9 0.5 CG Q:HIS101 4.6 48.4 1.0 ND1 Q:HIS101 4.8 48.4 1.0

J.Dai, G.J.Knott, W.Fu, T.W.Lin, A.L.Furst, R.D.Britt, M.B.Francis. Protein-Embedded Metalloporphyrin Arrays Templated By Circularly Permuted Tobacco Mosaic Virus Coat Proteins To Be Published.