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Iron in PDB 6xaj: Crystal Structure of Nzeb

Protein crystallography data

The structure of Crystal Structure of Nzeb, PDB code: 6xaj was solved by V.V.Shende, Y.Khatri, S.A.Newmister, J.N.Sanders, P.Lindovska, F.Yu, T.J.Doyon, J.Kim, M.Movassaghi, K.N.Houk, D.H.Sherman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.14 / 1.50
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 55.712, 55.808, 56.102, 90, 101.92, 90
R / Rfree (%) 18.9 / 21.9

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Nzeb (pdb code 6xaj). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Nzeb, PDB code: 6xaj:

Iron binding site 1 out of 1 in 6xaj

Go back to Iron Binding Sites List in 6xaj
Iron binding site 1 out of 1 in the Crystal Structure of Nzeb


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Nzeb within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe801

b:20.6
occ:1.00
FE A:HEM801 0.0 20.6 1.0
NB A:HEM801 2.0 18.7 1.0
NC A:HEM801 2.0 20.1 1.0
NA A:HEM801 2.0 18.7 1.0
ND A:HEM801 2.1 22.2 1.0
O A:HOH940 2.2 24.9 1.0
SG A:CYS351 2.3 20.8 1.0
C4A A:HEM801 3.0 17.7 1.0
C1C A:HEM801 3.0 20.1 1.0
C4B A:HEM801 3.1 18.5 1.0
C1B A:HEM801 3.1 19.0 1.0
C4C A:HEM801 3.1 21.4 1.0
C1D A:HEM801 3.1 22.6 1.0
C1A A:HEM801 3.1 22.1 1.0
C4D A:HEM801 3.1 21.6 1.0
CB A:CYS351 3.4 19.5 1.0
CHB A:HEM801 3.4 19.2 1.0
CHC A:HEM801 3.4 21.3 1.0
CHD A:HEM801 3.4 22.3 1.0
CHA A:HEM801 3.5 22.5 1.0
O A:ALA240 4.1 22.7 1.0
CA A:CYS351 4.2 20.8 1.0
C3A A:HEM801 4.3 20.1 1.0
C3B A:HEM801 4.3 19.6 1.0
C2C A:HEM801 4.3 22.8 1.0
C3C A:HEM801 4.3 22.9 1.0
C2B A:HEM801 4.3 17.6 1.0
C2A A:HEM801 4.3 20.4 1.0
C2D A:HEM801 4.3 22.2 1.0
C3D A:HEM801 4.3 22.9 1.0
O1 A:EDO804 4.4 35.3 1.0
C1 A:EDO804 4.7 28.7 1.0
N A:GLY353 4.8 21.4 1.0
C A:CYS351 4.9 21.4 1.0
CD A:PRO352 5.0 25.0 1.0
C A:ALA240 5.0 24.1 1.0

Reference:

V.V.Shende, Y.Khatri, S.A.Newmister, J.N.Sanders, P.Lindovska, F.Yu, T.J.Doyon, J.Kim, M.Movassaghi, K.N.Houk, D.H.Sherman. Crystal Structure of Nzeb To Be Published.
Page generated: Sat Jul 10 15:06:11 2021

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