Iron in PDB 6xkx: R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A)
Enzymatic activity of R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A)
All present enzymatic activity of R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A):
1.9.3.1;
7.1.1.8;
Other elements in 6xkx:
The structure of R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A) also contains other interesting chemical elements:
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
15;
Binding sites:
The binding sites of Iron atom in the R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A)
(pdb code 6xkx). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 15 binding sites of Iron where determined in the
R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A), PDB code: 6xkx:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 15 in 6xkx
Go back to
Iron Binding Sites List in 6xkx
Iron binding site 1 out
of 15 in the R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A)
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe501
b:74.8
occ:1.00
|
FE1
|
E:FES501
|
0.0
|
74.8
|
1.0
|
|
S2
|
E:FES501
|
2.2
|
74.8
|
1.0
|
|
S1
|
E:FES501
|
2.2
|
74.8
|
1.0
|
|
SG
|
E:CYS153
|
2.3
|
107.2
|
0.2
|
|
SG
|
E:CYS133
|
2.3
|
105.9
|
0.2
|
|
CB
|
E:CYS133
|
2.8
|
103.8
|
0.2
|
|
FE2
|
E:FES501
|
3.1
|
74.8
|
1.0
|
|
CB
|
E:CYS153
|
3.6
|
108.3
|
0.2
|
|
CB
|
E:CYS138
|
3.8
|
104.2
|
0.2
|
|
CB
|
E:HIS135
|
3.9
|
108.1
|
0.2
|
|
CA
|
E:CYS133
|
4.2
|
102.4
|
0.2
|
|
N
|
E:CYS138
|
4.3
|
102.3
|
0.2
|
|
ND1
|
E:HIS135
|
4.5
|
110.7
|
0.2
|
|
CB
|
E:CYS155
|
4.5
|
109.1
|
0.2
|
|
CA
|
E:CYS138
|
4.6
|
102.5
|
0.2
|
|
N
|
E:LEU136
|
4.6
|
105.3
|
0.2
|
|
SG
|
E:CYS138
|
4.6
|
105.4
|
0.2
|
|
OG
|
E:SER158
|
4.6
|
111.4
|
0.2
|
|
CG
|
E:HIS135
|
4.7
|
109.6
|
0.2
|
|
C
|
E:CYS133
|
4.7
|
102.4
|
0.2
|
|
N
|
E:HIS135
|
4.7
|
105.4
|
0.2
|
|
CA
|
E:HIS135
|
4.8
|
106.7
|
0.2
|
|
O
|
E:CYS133
|
4.8
|
102.0
|
0.2
|
|
O
|
E:CYS138
|
4.9
|
101.1
|
0.2
|
|
CA
|
E:CYS153
|
4.9
|
108.5
|
0.2
|
|
N
|
E:GLY137
|
5.0
|
102.5
|
0.2
|
|
C
|
E:CYS138
|
5.0
|
101.6
|
0.2
|
|
Iron binding site 2 out
of 15 in 6xkx
Go back to
Iron Binding Sites List in 6xkx
Iron binding site 2 out
of 15 in the R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A)
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe501
b:74.8
occ:1.00
|
FE2
|
E:FES501
|
0.0
|
74.8
|
1.0
|
|
ND1
|
E:HIS135
|
2.1
|
110.7
|
0.2
|
|
ND1
|
E:HIS156
|
2.1
|
111.9
|
0.2
|
|
S1
|
E:FES501
|
2.2
|
74.8
|
1.0
|
|
S2
|
E:FES501
|
2.2
|
74.8
|
1.0
|
|
CG
|
E:HIS156
|
3.0
|
113.8
|
0.2
|
|
CE1
|
E:HIS135
|
3.0
|
112.0
|
0.2
|
|
FE1
|
E:FES501
|
3.1
|
74.8
|
1.0
|
|
CG
|
E:HIS135
|
3.2
|
109.6
|
0.2
|
|
CB
|
E:HIS156
|
3.2
|
114.3
|
0.2
|
|
CE1
|
E:HIS156
|
3.2
|
112.0
|
0.2
|
|
CB
|
E:HIS135
|
3.5
|
108.1
|
0.2
|
|
N
|
E:HIS156
|
3.7
|
112.9
|
0.2
|
|
CB
|
E:CYS155
|
3.9
|
109.1
|
0.2
|
|
CA
|
E:HIS156
|
4.1
|
114.7
|
0.2
|
|
CD2
|
E:HIS156
|
4.2
|
114.9
|
0.2
|
|
NE2
|
E:HIS135
|
4.2
|
111.9
|
0.2
|
|
NE2
|
E:HIS156
|
4.2
|
113.8
|
0.2
|
|
C
|
E:CYS155
|
4.2
|
112.5
|
0.2
|
|
CD2
|
E:HIS135
|
4.3
|
110.4
|
0.2
|
|
SG
|
E:CYS153
|
4.4
|
107.2
|
0.2
|
|
N
|
E:LEU136
|
4.7
|
105.3
|
0.2
|
|
CA
|
E:CYS155
|
4.7
|
110.7
|
0.2
|
|
OG
|
E:SER158
|
4.7
|
111.4
|
0.2
|
|
SG
|
E:CYS133
|
4.8
|
105.9
|
0.2
|
|
O
|
E:CYS155
|
4.9
|
113.7
|
0.2
|
|
CA
|
E:HIS135
|
4.9
|
106.7
|
0.2
|
|
CB
|
E:LEU136
|
4.9
|
106.1
|
0.2
|
|
C
|
E:HIS156
|
5.0
|
115.6
|
0.2
|
|
CG
|
E:LEU136
|
5.0
|
107.7
|
0.2
|
|
Iron binding site 3 out
of 15 in 6xkx
Go back to
Iron Binding Sites List in 6xkx
Iron binding site 3 out
of 15 in the R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A)
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe501
b:46.9
occ:1.00
|
FE
|
C:HEC501
|
0.0
|
46.9
|
1.0
|
|
NE2
|
C:HIS97
|
2.0
|
46.5
|
1.0
|
|
NC
|
C:HEC501
|
2.0
|
51.4
|
1.0
|
|
NE2
|
C:HIS198
|
2.0
|
41.0
|
1.0
|
|
ND
|
C:HEC501
|
2.0
|
51.7
|
1.0
|
|
NB
|
C:HEC501
|
2.0
|
51.7
|
1.0
|
|
NA
|
C:HEC501
|
2.1
|
51.4
|
1.0
|
|
CE1
|
C:HIS97
|
2.8
|
84.7
|
1.0
|
|
CE1
|
C:HIS198
|
3.0
|
54.2
|
1.0
|
|
C4C
|
C:HEC501
|
3.0
|
52.6
|
1.0
|
|
C1C
|
C:HEC501
|
3.0
|
52.0
|
1.0
|
|
C1D
|
C:HEC501
|
3.0
|
52.3
|
1.0
|
|
C4B
|
C:HEC501
|
3.0
|
52.2
|
1.0
|
|
CD2
|
C:HIS97
|
3.1
|
79.5
|
1.0
|
|
C1B
|
C:HEC501
|
3.1
|
51.7
|
1.0
|
|
C4D
|
C:HEC501
|
3.1
|
52.3
|
1.0
|
|
CD2
|
C:HIS198
|
3.1
|
40.2
|
1.0
|
|
C4A
|
C:HEC501
|
3.1
|
51.4
|
1.0
|
|
C1A
|
C:HEC501
|
3.1
|
51.7
|
1.0
|
|
CHD
|
C:HEC501
|
3.4
|
53.0
|
1.0
|
|
CHC
|
C:HEC501
|
3.4
|
52.9
|
1.0
|
|
CHB
|
C:HEC501
|
3.5
|
51.8
|
1.0
|
|
CHA
|
C:HEC501
|
3.5
|
52.1
|
1.0
|
|
ND1
|
C:HIS97
|
3.9
|
92.4
|
1.0
|
|
CG
|
C:HIS97
|
4.1
|
85.4
|
1.0
|
|
ND1
|
C:HIS198
|
4.1
|
46.1
|
1.0
|
|
C3C
|
C:HEC501
|
4.2
|
52.3
|
1.0
|
|
CG
|
C:HIS198
|
4.2
|
73.3
|
1.0
|
|
C2C
|
C:HEC501
|
4.2
|
51.7
|
1.0
|
|
C2D
|
C:HEC501
|
4.3
|
52.5
|
1.0
|
|
C3B
|
C:HEC501
|
4.3
|
51.1
|
1.0
|
|
C2B
|
C:HEC501
|
4.3
|
51.1
|
1.0
|
|
C3D
|
C:HEC501
|
4.3
|
52.0
|
1.0
|
|
C2A
|
C:HEC501
|
4.3
|
51.9
|
1.0
|
|
C3A
|
C:HEC501
|
4.3
|
51.6
|
1.0
|
|
OE1
|
C:GLN58
|
5.0
|
12.1
|
1.0
|
|
Iron binding site 4 out
of 15 in 6xkx
Go back to
Iron Binding Sites List in 6xkx
Iron binding site 4 out
of 15 in the R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A)
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe502
b:49.1
occ:1.00
|
FE
|
C:HEC502
|
0.0
|
49.1
|
1.0
|
|
ND
|
C:HEC502
|
2.0
|
54.4
|
1.0
|
|
NE2
|
C:HIS212
|
2.0
|
40.9
|
1.0
|
|
NA
|
C:HEC502
|
2.0
|
54.1
|
1.0
|
|
NE2
|
C:HIS111
|
2.0
|
40.4
|
1.0
|
|
NC
|
C:HEC502
|
2.1
|
53.5
|
1.0
|
|
NB
|
C:HEC502
|
2.1
|
54.3
|
1.0
|
|
CE1
|
C:HIS212
|
2.9
|
36.6
|
1.0
|
|
C4D
|
C:HEC502
|
3.0
|
54.3
|
1.0
|
|
C1D
|
C:HEC502
|
3.0
|
54.8
|
1.0
|
|
CD2
|
C:HIS111
|
3.0
|
36.8
|
1.0
|
|
C1A
|
C:HEC502
|
3.0
|
54.8
|
1.0
|
|
CE1
|
C:HIS111
|
3.0
|
36.3
|
1.0
|
|
C4C
|
C:HEC502
|
3.1
|
54.2
|
1.0
|
|
CD2
|
C:HIS212
|
3.1
|
37.0
|
1.0
|
|
C4A
|
C:HEC502
|
3.1
|
53.6
|
1.0
|
|
C1C
|
C:HEC502
|
3.1
|
54.2
|
1.0
|
|
C1B
|
C:HEC502
|
3.1
|
54.4
|
1.0
|
|
C4B
|
C:HEC502
|
3.2
|
53.6
|
1.0
|
|
CHA
|
C:HEC502
|
3.4
|
54.5
|
1.0
|
|
CHD
|
C:HEC502
|
3.4
|
54.8
|
1.0
|
|
CHB
|
C:HEC502
|
3.5
|
53.5
|
1.0
|
|
CHC
|
C:HEC502
|
3.5
|
53.9
|
1.0
|
|
ND1
|
C:HIS212
|
4.1
|
37.1
|
1.0
|
|
ND1
|
C:HIS111
|
4.1
|
36.8
|
1.0
|
|
CG
|
C:HIS212
|
4.2
|
36.9
|
1.0
|
|
CG
|
C:HIS111
|
4.2
|
36.8
|
1.0
|
|
C3D
|
C:HEC502
|
4.2
|
54.4
|
1.0
|
|
C2D
|
C:HEC502
|
4.2
|
54.7
|
1.0
|
|
C2A
|
C:HEC502
|
4.3
|
54.0
|
1.0
|
|
C3A
|
C:HEC502
|
4.3
|
54.2
|
1.0
|
|
C3C
|
C:HEC502
|
4.3
|
54.3
|
1.0
|
|
C2C
|
C:HEC502
|
4.3
|
54.5
|
1.0
|
|
C2B
|
C:HEC502
|
4.4
|
53.7
|
1.0
|
|
C3B
|
C:HEC502
|
4.4
|
52.9
|
1.0
|
|
Iron binding site 5 out
of 15 in 6xkx
Go back to
Iron Binding Sites List in 6xkx
Iron binding site 5 out
of 15 in the R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A)
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe501
b:43.4
occ:1.00
|
FE
|
D:HEC501
|
0.0
|
43.4
|
1.0
|
|
NE2
|
D:HIS38
|
2.0
|
57.4
|
1.0
|
|
NB
|
D:HEC501
|
2.0
|
47.2
|
1.0
|
|
NC
|
D:HEC501
|
2.0
|
48.4
|
1.0
|
|
NA
|
D:HEC501
|
2.1
|
48.5
|
1.0
|
|
ND
|
D:HEC501
|
2.1
|
48.0
|
1.0
|
|
SD
|
D:MET183
|
2.1
|
55.8
|
1.0
|
|
CD2
|
D:HIS38
|
2.9
|
52.2
|
1.0
|
|
CE1
|
D:HIS38
|
3.0
|
52.2
|
1.0
|
|
C4B
|
D:HEC501
|
3.0
|
48.2
|
1.0
|
|
C1C
|
D:HEC501
|
3.1
|
48.8
|
1.0
|
|
C1B
|
D:HEC501
|
3.1
|
47.7
|
1.0
|
|
C4A
|
D:HEC501
|
3.1
|
48.4
|
1.0
|
|
C1A
|
D:HEC501
|
3.1
|
48.5
|
1.0
|
|
C4C
|
D:HEC501
|
3.1
|
48.0
|
1.0
|
|
C4D
|
D:HEC501
|
3.1
|
48.1
|
1.0
|
|
C1D
|
D:HEC501
|
3.1
|
47.9
|
1.0
|
|
CHC
|
D:HEC501
|
3.4
|
49.0
|
1.0
|
|
CE
|
D:MET183
|
3.4
|
45.4
|
1.0
|
|
CHB
|
D:HEC501
|
3.4
|
48.3
|
1.0
|
|
CHD
|
D:HEC501
|
3.4
|
47.8
|
1.0
|
|
CHA
|
D:HEC501
|
3.4
|
48.8
|
1.0
|
|
CG
|
D:MET183
|
3.5
|
45.7
|
1.0
|
|
CG
|
D:HIS38
|
4.0
|
51.7
|
1.0
|
|
ND1
|
D:HIS38
|
4.1
|
51.7
|
1.0
|
|
CB
|
D:MET183
|
4.2
|
45.7
|
1.0
|
|
C3B
|
D:HEC501
|
4.3
|
48.4
|
1.0
|
|
C2B
|
D:HEC501
|
4.3
|
48.3
|
1.0
|
|
C3A
|
D:HEC501
|
4.3
|
48.1
|
1.0
|
|
C2A
|
D:HEC501
|
4.3
|
47.9
|
1.0
|
|
C2C
|
D:HEC501
|
4.3
|
48.1
|
1.0
|
|
C3C
|
D:HEC501
|
4.3
|
48.2
|
1.0
|
|
C2D
|
D:HEC501
|
4.3
|
48.0
|
1.0
|
|
C3D
|
D:HEC501
|
4.3
|
47.9
|
1.0
|
|
Iron binding site 6 out
of 15 in 6xkx
Go back to
Iron Binding Sites List in 6xkx
Iron binding site 6 out
of 15 in the R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A)
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe501
b:46.9
occ:1.00
|
FE
|
P:HEC501
|
0.0
|
46.9
|
1.0
|
|
NE2
|
P:HIS97
|
2.0
|
46.5
|
1.0
|
|
NC
|
P:HEC501
|
2.0
|
51.4
|
1.0
|
|
NE2
|
P:HIS198
|
2.0
|
41.0
|
1.0
|
|
ND
|
P:HEC501
|
2.0
|
51.7
|
1.0
|
|
NB
|
P:HEC501
|
2.0
|
51.7
|
1.0
|
|
NA
|
P:HEC501
|
2.1
|
51.4
|
1.0
|
|
CE1
|
P:HIS97
|
2.8
|
84.7
|
1.0
|
|
CE1
|
P:HIS198
|
3.0
|
54.2
|
1.0
|
|
C4C
|
P:HEC501
|
3.0
|
52.6
|
1.0
|
|
C1C
|
P:HEC501
|
3.0
|
52.0
|
1.0
|
|
C1D
|
P:HEC501
|
3.0
|
52.3
|
1.0
|
|
C4B
|
P:HEC501
|
3.0
|
52.2
|
1.0
|
|
CD2
|
P:HIS97
|
3.1
|
79.5
|
1.0
|
|
C1B
|
P:HEC501
|
3.1
|
51.7
|
1.0
|
|
C4D
|
P:HEC501
|
3.1
|
52.3
|
1.0
|
|
CD2
|
P:HIS198
|
3.1
|
40.2
|
1.0
|
|
C4A
|
P:HEC501
|
3.1
|
51.4
|
1.0
|
|
C1A
|
P:HEC501
|
3.1
|
51.7
|
1.0
|
|
CHD
|
P:HEC501
|
3.4
|
53.0
|
1.0
|
|
CHC
|
P:HEC501
|
3.4
|
52.9
|
1.0
|
|
CHB
|
P:HEC501
|
3.5
|
51.8
|
1.0
|
|
CHA
|
P:HEC501
|
3.5
|
52.1
|
1.0
|
|
ND1
|
P:HIS97
|
3.9
|
92.4
|
1.0
|
|
CG
|
P:HIS97
|
4.1
|
85.4
|
1.0
|
|
ND1
|
P:HIS198
|
4.1
|
46.1
|
1.0
|
|
C3C
|
P:HEC501
|
4.2
|
52.3
|
1.0
|
|
CG
|
P:HIS198
|
4.2
|
73.3
|
1.0
|
|
C2C
|
P:HEC501
|
4.2
|
51.7
|
1.0
|
|
C3B
|
P:HEC501
|
4.3
|
51.1
|
1.0
|
|
C2D
|
P:HEC501
|
4.3
|
52.5
|
1.0
|
|
C2B
|
P:HEC501
|
4.3
|
51.1
|
1.0
|
|
C3D
|
P:HEC501
|
4.3
|
52.0
|
1.0
|
|
C2A
|
P:HEC501
|
4.3
|
51.9
|
1.0
|
|
C3A
|
P:HEC501
|
4.3
|
51.6
|
1.0
|
|
OE1
|
P:GLN58
|
5.0
|
12.1
|
1.0
|
|
Iron binding site 7 out
of 15 in 6xkx
Go back to
Iron Binding Sites List in 6xkx
Iron binding site 7 out
of 15 in the R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A)
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe502
b:49.1
occ:1.00
|
FE
|
P:HEC502
|
0.0
|
49.1
|
1.0
|
|
ND
|
P:HEC502
|
2.0
|
54.4
|
1.0
|
|
NE2
|
P:HIS212
|
2.0
|
40.9
|
1.0
|
|
NA
|
P:HEC502
|
2.0
|
54.1
|
1.0
|
|
NE2
|
P:HIS111
|
2.0
|
40.4
|
1.0
|
|
NC
|
P:HEC502
|
2.1
|
53.5
|
1.0
|
|
NB
|
P:HEC502
|
2.1
|
54.3
|
1.0
|
|
CE1
|
P:HIS212
|
2.9
|
36.6
|
1.0
|
|
C4D
|
P:HEC502
|
3.0
|
54.3
|
1.0
|
|
C1D
|
P:HEC502
|
3.0
|
54.8
|
1.0
|
|
CD2
|
P:HIS111
|
3.0
|
36.8
|
1.0
|
|
C1A
|
P:HEC502
|
3.0
|
54.8
|
1.0
|
|
CE1
|
P:HIS111
|
3.0
|
36.3
|
1.0
|
|
CD2
|
P:HIS212
|
3.1
|
37.0
|
1.0
|
|
C4C
|
P:HEC502
|
3.1
|
54.2
|
1.0
|
|
C4A
|
P:HEC502
|
3.1
|
53.6
|
1.0
|
|
C1C
|
P:HEC502
|
3.1
|
54.2
|
1.0
|
|
C1B
|
P:HEC502
|
3.1
|
54.4
|
1.0
|
|
C4B
|
P:HEC502
|
3.2
|
53.6
|
1.0
|
|
CHA
|
P:HEC502
|
3.4
|
54.5
|
1.0
|
|
CHD
|
P:HEC502
|
3.4
|
54.8
|
1.0
|
|
CHB
|
P:HEC502
|
3.5
|
53.5
|
1.0
|
|
CHC
|
P:HEC502
|
3.5
|
53.9
|
1.0
|
|
ND1
|
P:HIS212
|
4.1
|
37.1
|
1.0
|
|
ND1
|
P:HIS111
|
4.1
|
36.8
|
1.0
|
|
CG
|
P:HIS212
|
4.2
|
36.9
|
1.0
|
|
CG
|
P:HIS111
|
4.2
|
36.8
|
1.0
|
|
C3D
|
P:HEC502
|
4.2
|
54.4
|
1.0
|
|
C2D
|
P:HEC502
|
4.2
|
54.7
|
1.0
|
|
C2A
|
P:HEC502
|
4.3
|
54.0
|
1.0
|
|
C3A
|
P:HEC502
|
4.3
|
54.2
|
1.0
|
|
C3C
|
P:HEC502
|
4.3
|
54.3
|
1.0
|
|
C2C
|
P:HEC502
|
4.3
|
54.5
|
1.0
|
|
C2B
|
P:HEC502
|
4.4
|
53.7
|
1.0
|
|
C3B
|
P:HEC502
|
4.4
|
52.9
|
1.0
|
|
Iron binding site 8 out
of 15 in 6xkx
Go back to
Iron Binding Sites List in 6xkx
Iron binding site 8 out
of 15 in the R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A)
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
Q:Fe501
b:43.4
occ:1.00
|
FE
|
Q:HEC501
|
0.0
|
43.4
|
1.0
|
|
NE2
|
Q:HIS38
|
2.0
|
57.4
|
1.0
|
|
NB
|
Q:HEC501
|
2.0
|
47.2
|
1.0
|
|
NC
|
Q:HEC501
|
2.0
|
48.4
|
1.0
|
|
NA
|
Q:HEC501
|
2.1
|
48.5
|
1.0
|
|
ND
|
Q:HEC501
|
2.1
|
48.0
|
1.0
|
|
SD
|
Q:MET183
|
2.1
|
55.8
|
1.0
|
|
CD2
|
Q:HIS38
|
2.9
|
52.2
|
1.0
|
|
CE1
|
Q:HIS38
|
3.0
|
52.2
|
1.0
|
|
C4B
|
Q:HEC501
|
3.0
|
48.2
|
1.0
|
|
C1C
|
Q:HEC501
|
3.1
|
48.8
|
1.0
|
|
C1B
|
Q:HEC501
|
3.1
|
47.7
|
1.0
|
|
C4A
|
Q:HEC501
|
3.1
|
48.4
|
1.0
|
|
C1A
|
Q:HEC501
|
3.1
|
48.5
|
1.0
|
|
C4C
|
Q:HEC501
|
3.1
|
48.0
|
1.0
|
|
C4D
|
Q:HEC501
|
3.1
|
48.1
|
1.0
|
|
C1D
|
Q:HEC501
|
3.1
|
47.9
|
1.0
|
|
CHC
|
Q:HEC501
|
3.4
|
49.0
|
1.0
|
|
CE
|
Q:MET183
|
3.4
|
45.4
|
1.0
|
|
CHB
|
Q:HEC501
|
3.4
|
48.3
|
1.0
|
|
CHD
|
Q:HEC501
|
3.4
|
47.8
|
1.0
|
|
CHA
|
Q:HEC501
|
3.4
|
48.8
|
1.0
|
|
CG
|
Q:MET183
|
3.5
|
45.7
|
1.0
|
|
CG
|
Q:HIS38
|
4.0
|
51.7
|
1.0
|
|
ND1
|
Q:HIS38
|
4.1
|
51.7
|
1.0
|
|
CB
|
Q:MET183
|
4.2
|
45.7
|
1.0
|
|
C3B
|
Q:HEC501
|
4.3
|
48.4
|
1.0
|
|
C2B
|
Q:HEC501
|
4.3
|
48.3
|
1.0
|
|
C3A
|
Q:HEC501
|
4.3
|
48.1
|
1.0
|
|
C2A
|
Q:HEC501
|
4.3
|
47.9
|
1.0
|
|
C2C
|
Q:HEC501
|
4.3
|
48.1
|
1.0
|
|
C3C
|
Q:HEC501
|
4.3
|
48.2
|
1.0
|
|
C2D
|
Q:HEC501
|
4.3
|
48.0
|
1.0
|
|
C3D
|
Q:HEC501
|
4.3
|
47.9
|
1.0
|
|
Iron binding site 9 out
of 15 in 6xkx
Go back to
Iron Binding Sites List in 6xkx
Iron binding site 9 out
of 15 in the R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A)
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
R:Fe501
b:74.5
occ:1.00
|
FE1
|
R:FES501
|
0.0
|
74.5
|
1.0
|
|
S1
|
R:FES501
|
2.2
|
74.5
|
1.0
|
|
S2
|
R:FES501
|
2.2
|
74.5
|
1.0
|
|
SG
|
R:CYS133
|
2.3
|
105.9
|
0.2
|
|
SG
|
R:CYS153
|
2.3
|
107.2
|
0.2
|
|
CB
|
R:CYS133
|
2.8
|
103.8
|
0.2
|
|
FE2
|
R:FES501
|
3.1
|
74.5
|
1.0
|
|
CB
|
R:CYS153
|
3.6
|
108.3
|
0.2
|
|
CB
|
R:CYS138
|
3.8
|
104.2
|
0.2
|
|
CB
|
R:HIS135
|
3.9
|
108.1
|
0.2
|
|
CA
|
R:CYS133
|
4.2
|
102.4
|
0.2
|
|
N
|
R:CYS138
|
4.3
|
102.3
|
0.2
|
|
ND1
|
R:HIS135
|
4.5
|
110.7
|
0.2
|
|
CB
|
R:CYS155
|
4.5
|
109.1
|
0.2
|
|
CA
|
R:CYS138
|
4.6
|
102.5
|
0.2
|
|
N
|
R:LEU136
|
4.6
|
105.3
|
0.2
|
|
SG
|
R:CYS138
|
4.6
|
105.4
|
0.2
|
|
OG
|
R:SER158
|
4.6
|
111.4
|
0.2
|
|
CG
|
R:HIS135
|
4.7
|
109.6
|
0.2
|
|
C
|
R:CYS133
|
4.7
|
102.4
|
0.2
|
|
N
|
R:HIS135
|
4.7
|
105.4
|
0.2
|
|
CA
|
R:HIS135
|
4.8
|
106.7
|
0.2
|
|
O
|
R:CYS133
|
4.8
|
102.0
|
0.2
|
|
O
|
R:CYS138
|
4.9
|
101.1
|
0.2
|
|
CA
|
R:CYS153
|
4.9
|
108.5
|
0.2
|
|
N
|
R:GLY137
|
5.0
|
102.5
|
0.2
|
|
C
|
R:CYS138
|
5.0
|
101.6
|
0.2
|
|
Iron binding site 10 out
of 15 in 6xkx
Go back to
Iron Binding Sites List in 6xkx
Iron binding site 10 out
of 15 in the R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A)
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of R. Capsulatus CIII2CIV Tripartite Super-Complex, Conformation A (Sc- 1A) within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
R:Fe501
b:74.5
occ:1.00
|
FE2
|
R:FES501
|
0.0
|
74.5
|
1.0
|
|
ND1
|
R:HIS135
|
2.1
|
110.7
|
0.2
|
|
ND1
|
R:HIS156
|
2.1
|
111.9
|
0.2
|
|
S2
|
R:FES501
|
2.2
|
74.5
|
1.0
|
|
S1
|
R:FES501
|
2.2
|
74.5
|
1.0
|
|
CG
|
R:HIS156
|
3.0
|
113.8
|
0.2
|
|
CE1
|
R:HIS135
|
3.0
|
112.0
|
0.2
|
|
FE1
|
R:FES501
|
3.1
|
74.5
|
1.0
|
|
CG
|
R:HIS135
|
3.2
|
109.6
|
0.2
|
|
CB
|
R:HIS156
|
3.2
|
114.3
|
0.2
|
|
CE1
|
R:HIS156
|
3.2
|
112.0
|
0.2
|
|
CB
|
R:HIS135
|
3.5
|
108.1
|
0.2
|
|
N
|
R:HIS156
|
3.7
|
112.9
|
0.2
|
|
CB
|
R:CYS155
|
3.9
|
109.1
|
0.2
|
|
CA
|
R:HIS156
|
4.1
|
114.7
|
0.2
|
|
CD2
|
R:HIS156
|
4.2
|
114.9
|
0.2
|
|
NE2
|
R:HIS135
|
4.2
|
111.9
|
0.2
|
|
NE2
|
R:HIS156
|
4.2
|
113.8
|
0.2
|
|
C
|
R:CYS155
|
4.2
|
112.5
|
0.2
|
|
CD2
|
R:HIS135
|
4.3
|
110.4
|
0.2
|
|
SG
|
R:CYS153
|
4.4
|
107.2
|
0.2
|
|
N
|
R:LEU136
|
4.7
|
105.3
|
0.2
|
|
CA
|
R:CYS155
|
4.7
|
110.7
|
0.2
|
|
OG
|
R:SER158
|
4.7
|
111.4
|
0.2
|
|
SG
|
R:CYS133
|
4.8
|
105.9
|
0.2
|
|
O
|
R:CYS155
|
4.9
|
113.7
|
0.2
|
|
CA
|
R:HIS135
|
4.9
|
106.7
|
0.2
|
|
CB
|
R:LEU136
|
4.9
|
106.1
|
0.2
|
|
C
|
R:HIS156
|
5.0
|
115.6
|
0.2
|
|
CG
|
R:LEU136
|
5.0
|
107.7
|
0.2
|
|
Reference:
S.Steimle,
T.Van Eeuwen,
Y.Ozturk,
H.J.Kim,
M.Braitbard,
N.Selamoglu,
B.A.Garcia,
D.Schneidman-Duhovny,
K.Murakami,
F.Daldal.
Cryo-Em Structures of Respiratory BC1-CBB3 Type CIII2CIV Supercomplex and Electronic Communication Between the Complexes To Be Published.
Page generated: Wed Aug 7 15:27:31 2024
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