Atomistry » Iron » PDB 6zag-6zkg » 6zk6
Atomistry »
  Iron »
    PDB 6zag-6zkg »
      6zk6 »

Iron in PDB 6zk6: Protein Phosphatase 1 (PP1) T320E Mutant

Enzymatic activity of Protein Phosphatase 1 (PP1) T320E Mutant

All present enzymatic activity of Protein Phosphatase 1 (PP1) T320E Mutant:
3.1.3.16;

Protein crystallography data

The structure of Protein Phosphatase 1 (PP1) T320E Mutant, PDB code: 6zk6 was solved by F.Salvi, O.Barabas, M.Koehn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.22 / 1.90
Space group P 2 21 21
Cell size a, b, c (Å), α, β, γ (°) 38.546, 68.749, 127.846, 90.00, 90.00, 90.00
R / Rfree (%) 15.9 / 19.4

Other elements in 6zk6:

The structure of Protein Phosphatase 1 (PP1) T320E Mutant also contains other interesting chemical elements:

Manganese (Mn) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Protein Phosphatase 1 (PP1) T320E Mutant (pdb code 6zk6). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Protein Phosphatase 1 (PP1) T320E Mutant, PDB code: 6zk6:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 6zk6

Go back to Iron Binding Sites List in 6zk6
Iron binding site 1 out of 2 in the Protein Phosphatase 1 (PP1) T320E Mutant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Protein Phosphatase 1 (PP1) T320E Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe403

b:23.2
occ:0.50
MN A:MN401 0.5 26.8 0.5
OD1 A:ASN124 1.9 28.3 1.0
NE2 A:HIS173 2.1 28.8 1.0
O3 A:PO4405 2.2 30.6 1.0
ND1 A:HIS248 2.2 27.9 1.0
OD2 A:ASP92 2.3 31.2 1.0
O A:HOH542 2.4 31.6 1.0
CE1 A:HIS248 2.9 29.0 1.0
CG A:ASN124 3.0 26.9 1.0
CD2 A:HIS173 3.0 24.4 1.0
CE1 A:HIS173 3.1 25.1 1.0
MN A:MN402 3.1 32.3 0.5
CG A:ASP92 3.2 28.0 1.0
CG A:HIS248 3.4 28.6 1.0
ND2 A:ASN124 3.5 25.8 1.0
OD1 A:ASP92 3.5 25.5 1.0
P A:PO4405 3.5 33.8 1.0
FE A:FE404 3.7 31.1 0.5
O1 A:PO4405 3.7 32.6 1.0
CA A:HIS248 3.9 26.8 1.0
CB A:HIS248 4.0 25.9 1.0
NE2 A:HIS248 4.2 30.0 1.0
O4 A:PO4405 4.2 34.6 1.0
ND1 A:HIS173 4.2 24.8 1.0
CG A:HIS173 4.2 23.3 1.0
OD2 A:ASP64 4.2 36.3 1.0
N A:ASN124 4.3 23.2 1.0
CB A:ASN124 4.3 25.0 1.0
O A:HIS248 4.3 31.4 1.0
CD2 A:HIS125 4.4 26.3 1.0
CD2 A:HIS248 4.4 27.3 1.0
CB A:ASP92 4.4 26.7 1.0
O A:LEU205 4.5 28.1 1.0
O2 A:PO4405 4.6 34.9 1.0
C A:HIS248 4.6 31.6 1.0
CA A:ASN124 4.8 25.4 1.0
N A:HIS248 5.0 25.1 1.0

Iron binding site 2 out of 2 in 6zk6

Go back to Iron Binding Sites List in 6zk6
Iron binding site 2 out of 2 in the Protein Phosphatase 1 (PP1) T320E Mutant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Protein Phosphatase 1 (PP1) T320E Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe404

b:31.1
occ:0.50
MN A:MN402 0.7 32.3 0.5
O A:HOH550 2.0 30.3 1.0
O1 A:PO4405 2.0 32.6 1.0
NE2 A:HIS66 2.1 33.3 1.0
OD2 A:ASP64 2.1 36.3 1.0
O A:HOH542 2.2 31.6 1.0
OD2 A:ASP92 2.6 31.2 1.0
CD2 A:HIS66 3.0 30.1 1.0
CE1 A:HIS66 3.1 30.7 1.0
MN A:MN401 3.3 26.8 0.5
P A:PO4405 3.3 33.8 1.0
CG A:ASP64 3.4 32.7 1.0
CG A:ASP92 3.5 28.0 1.0
O3 A:PO4405 3.6 30.6 1.0
FE A:FE403 3.7 23.2 0.5
O4 A:PO4405 3.8 34.6 1.0
CB A:ASP92 3.9 26.7 1.0
O A:HOH507 3.9 41.1 1.0
NH2 A:ARG96 3.9 33.6 1.0
OH A:TYR272 4.0 41.9 1.0
CG A:HIS66 4.2 30.4 1.0
CB A:ASP64 4.2 32.4 1.0
ND1 A:HIS66 4.2 30.7 1.0
OD1 A:ASP64 4.2 32.6 1.0
O2 A:PO4405 4.5 34.9 1.0
CD2 A:HIS125 4.5 26.3 1.0
O A:HIS248 4.6 31.4 1.0
CE1 A:PHE267 4.6 32.7 1.0
OD1 A:ASP92 4.7 25.5 1.0
NE2 A:HIS173 4.7 28.8 1.0
CE1 A:HIS173 4.8 25.1 1.0
NE2 A:HIS125 4.8 27.7 1.0
CZ A:TYR272 4.8 41.4 1.0
CA A:HIS248 4.8 26.8 1.0
C A:HIS248 4.9 31.6 1.0

Reference:

M.Kohn, F.Salvi, B.Hoermann, J.Del Pino Garcia, M.Fontanillo, R.Derua, M.Beullens, M.Bollen, O.Barabas. Towards Dissecting the Mechanism of Protein Phosphatase-1 Inhibition By Its C-Terminal Phosphorylation. Chembiochem 2020.
ISSN: ESSN 1439-7633
PubMed: 33085143
DOI: 10.1002/CBIC.202000669
Page generated: Wed Aug 7 18:43:54 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy