Atomistry » Iron » PDB 6zmc-7chi » 6zmx
Atomistry »
  Iron »
    PDB 6zmc-7chi »
      6zmx »

Iron in PDB 6zmx: Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution

Protein crystallography data

The structure of Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution, PDB code: 6zmx was solved by R.Pandian, N.Shobana, S.S.Sundaresan, Y.Sayed, M.N.Ponnuswamy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 60.84 / 1.39
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 79.760, 82.140, 90.540, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 22.3

Other elements in 6zmx:

The structure of Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution also contains other interesting chemical elements:

Sodium (Na) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution (pdb code 6zmx). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution, PDB code: 6zmx:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in 6zmx

Go back to Iron Binding Sites List in 6zmx
Iron binding site 1 out of 4 in the Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:16.0
occ:1.00
FE A:HEM201 0.0 16.0 1.0
NC A:HEM201 2.0 17.0 1.0
NB A:HEM201 2.0 15.3 1.0
NA A:HEM201 2.0 18.4 1.0
ND A:HEM201 2.1 16.1 1.0
NE2 A:HIS87 2.2 16.3 1.0
O A:HOH303 2.3 28.9 1.0
C1C A:HEM201 3.0 15.1 1.0
C4B A:HEM201 3.0 16.2 1.0
C4C A:HEM201 3.1 16.2 1.0
C4D A:HEM201 3.1 20.8 1.0
C1D A:HEM201 3.1 16.1 1.0
C1A A:HEM201 3.1 16.7 1.0
CE1 A:HIS87 3.1 15.4 1.0
C1B A:HEM201 3.1 14.8 1.0
C4A A:HEM201 3.1 15.3 1.0
CD2 A:HIS87 3.2 17.6 1.0
CHC A:HEM201 3.3 17.6 1.0
CHA A:HEM201 3.4 17.9 1.0
CHD A:HEM201 3.5 16.6 1.0
CHB A:HEM201 3.5 16.3 1.0
NE2 A:HIS58 4.2 18.7 1.0
C2C A:HEM201 4.2 16.2 1.0
ND1 A:HIS87 4.2 18.3 1.0
C3C A:HEM201 4.3 17.4 1.0
C3B A:HEM201 4.3 18.0 1.0
C2B A:HEM201 4.3 16.8 1.0
C3D A:HEM201 4.3 18.1 1.0
C2D A:HEM201 4.3 15.2 1.0
C2A A:HEM201 4.3 21.8 1.0
CG A:HIS87 4.3 16.3 1.0
CE1 A:HIS58 4.3 21.8 1.0
C3A A:HEM201 4.3 19.2 1.0
CG2 A:VAL62 4.9 18.3 1.0

Iron binding site 2 out of 4 in 6zmx

Go back to Iron Binding Sites List in 6zmx
Iron binding site 2 out of 4 in the Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:20.7
occ:1.00
FE B:HEM201 0.0 20.7 1.0
NC B:HEM201 2.0 17.8 1.0
NA B:HEM201 2.0 20.0 1.0
ND B:HEM201 2.0 19.2 1.0
NB B:HEM201 2.1 19.5 1.0
NE2 B:HIS92 2.2 21.1 1.0
O B:HOH333 2.3 28.8 1.0
C1C B:HEM201 3.0 19.3 1.0
C4A B:HEM201 3.0 23.1 1.0
C4C B:HEM201 3.0 17.1 1.0
C1D B:HEM201 3.0 18.1 1.0
C4B B:HEM201 3.1 20.4 1.0
C1A B:HEM201 3.1 22.0 1.0
C4D B:HEM201 3.1 22.4 1.0
C1B B:HEM201 3.1 18.6 1.0
CE1 B:HIS92 3.1 25.4 1.0
CD2 B:HIS92 3.2 20.1 1.0
CHC B:HEM201 3.4 19.9 1.0
CHD B:HEM201 3.4 18.9 1.0
CHB B:HEM201 3.4 20.0 1.0
CHA B:HEM201 3.5 21.0 1.0
C2C B:HEM201 4.2 18.4 1.0
NE2 B:HIS63 4.2 25.7 1.0
C3A B:HEM201 4.3 26.9 1.0
C3C B:HEM201 4.3 19.1 1.0
C2D B:HEM201 4.3 24.5 1.0
ND1 B:HIS92 4.3 25.7 1.0
C3D B:HEM201 4.3 22.3 1.0
C2A B:HEM201 4.3 26.2 1.0
C2B B:HEM201 4.3 19.4 1.0
C3B B:HEM201 4.3 21.1 1.0
CG B:HIS92 4.3 21.5 1.0
CG2 B:VAL67 4.7 24.7 1.0
CE1 B:HIS63 4.7 26.1 1.0

Iron binding site 3 out of 4 in 6zmx

Go back to Iron Binding Sites List in 6zmx
Iron binding site 3 out of 4 in the Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe201

b:17.0
occ:1.00
FE C:HEM201 0.0 17.0 1.0
NC C:HEM201 2.0 17.3 1.0
NB C:HEM201 2.0 16.5 1.0
NA C:HEM201 2.0 18.2 1.0
ND C:HEM201 2.0 17.4 1.0
NE2 C:HIS87 2.2 17.6 1.0
O C:HOH307 2.3 26.5 1.0
C1C C:HEM201 3.0 15.7 1.0
C4B C:HEM201 3.0 16.5 1.0
C4C C:HEM201 3.1 13.2 1.0
C4D C:HEM201 3.1 18.4 1.0
C1B C:HEM201 3.1 18.4 1.0
C1A C:HEM201 3.1 20.5 1.0
C4A C:HEM201 3.1 16.8 1.0
C1D C:HEM201 3.1 15.9 1.0
CE1 C:HIS87 3.1 18.9 1.0
CD2 C:HIS87 3.2 18.6 1.0
CHC C:HEM201 3.4 18.1 1.0
CHA C:HEM201 3.4 17.8 1.0
CHB C:HEM201 3.4 15.1 1.0
CHD C:HEM201 3.4 16.3 1.0
C2C C:HEM201 4.2 17.9 1.0
C3C C:HEM201 4.3 15.6 1.0
C3B C:HEM201 4.3 18.7 1.0
ND1 C:HIS87 4.3 19.5 1.0
NE2 C:HIS58 4.3 21.1 1.0
C2B C:HEM201 4.3 16.3 1.0
C3D C:HEM201 4.3 21.4 1.0
C2D C:HEM201 4.3 18.2 1.0
C3A C:HEM201 4.3 22.5 1.0
C2A C:HEM201 4.3 23.9 1.0
CG C:HIS87 4.3 17.8 1.0
CE1 C:HIS58 4.3 22.8 1.0
CG2 C:VAL62 4.8 18.9 1.0

Iron binding site 4 out of 4 in 6zmx

Go back to Iron Binding Sites List in 6zmx
Iron binding site 4 out of 4 in the Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe201

b:17.2
occ:1.00
FE D:HEM201 0.0 17.2 1.0
NC D:HEM201 2.0 14.5 1.0
NA D:HEM201 2.0 15.6 1.0
ND D:HEM201 2.1 17.4 1.0
NB D:HEM201 2.1 15.9 1.0
NE2 D:HIS92 2.2 19.8 1.0
O D:HOH325 2.2 22.6 1.0
C4A D:HEM201 3.0 17.2 1.0
C4C D:HEM201 3.0 14.9 1.0
C1C D:HEM201 3.0 14.4 1.0
C1D D:HEM201 3.0 18.0 1.0
C1A D:HEM201 3.1 16.4 1.0
C1B D:HEM201 3.1 18.5 1.0
C4D D:HEM201 3.1 18.3 1.0
C4B D:HEM201 3.1 16.0 1.0
CE1 D:HIS92 3.1 20.4 1.0
CD2 D:HIS92 3.1 16.6 1.0
CHD D:HEM201 3.4 16.2 1.0
CHB D:HEM201 3.4 18.8 1.0
CHA D:HEM201 3.4 19.8 1.0
CHC D:HEM201 3.4 16.0 1.0
ND1 D:HIS92 4.2 20.0 1.0
NE2 D:HIS63 4.3 21.3 1.0
C3A D:HEM201 4.3 19.7 1.0
C3C D:HEM201 4.3 18.2 1.0
C2C D:HEM201 4.3 18.1 1.0
C2D D:HEM201 4.3 21.3 1.0
C2A D:HEM201 4.3 21.1 1.0
C2B D:HEM201 4.3 18.8 1.0
C3D D:HEM201 4.3 20.3 1.0
CG D:HIS92 4.3 17.6 1.0
C3B D:HEM201 4.3 18.5 1.0
CG2 D:VAL67 4.7 23.3 1.0
CE1 D:HIS63 4.7 23.0 1.0

Reference:

R.Pandian, N.Shobana, S.S.Sundaresan, Y.Sayed, M.N.Ponnuswamy. Crystal Structure of Hemoglobin From Turkey (Meleagiris Gallopova) Crystallized in Orthorhombic Form at 1.4 Angstrom Resolution To Be Published.
Page generated: Sun Dec 13 18:26:16 2020

Last articles

Tb in 6TVY
Si in 6Y7O
Rh in 6WRM
Rh in 6WRL
Ni in 6Y8Z
Ni in 6Y8Y
Na in 6ZXZ
Na in 7ACG
Na in 6YLS
Na in 6Y8Z
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy