Iron in PDB 6zr2: Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A
Enzymatic activity of Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A
All present enzymatic activity of Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A:
7.1.1.2;
Other elements in 6zr2:
The structure of Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A also contains other interesting chemical elements:
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
28;
Binding sites:
The binding sites of Iron atom in the Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A
(pdb code 6zr2). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 28 binding sites of Iron where determined in the
Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A, PDB code: 6zr2:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 28 in 6zr2
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Iron Binding Sites List in 6zr2
Iron binding site 1 out
of 28 in the Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_01.jpg) Mono view
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_01_stereo.jpg) Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe201
b:19.5
occ:1.00
|
FE1
|
B:SF4201
|
0.0
|
19.5
|
1.0
|
SG
|
B:CYS129
|
2.3
|
18.1
|
1.0
|
S2
|
B:SF4201
|
2.3
|
19.5
|
1.0
|
S3
|
B:SF4201
|
2.3
|
19.5
|
1.0
|
S4
|
B:SF4201
|
2.3
|
19.5
|
1.0
|
FE4
|
B:SF4201
|
2.7
|
19.5
|
1.0
|
FE3
|
B:SF4201
|
2.7
|
19.5
|
1.0
|
FE2
|
B:SF4201
|
2.8
|
19.5
|
1.0
|
CB
|
B:CYS129
|
3.1
|
18.1
|
1.0
|
S1
|
B:SF4201
|
3.9
|
19.5
|
1.0
|
OG1
|
B:THR101
|
3.9
|
19.6
|
1.0
|
N
|
B:CYS129
|
4.2
|
18.1
|
1.0
|
CA
|
B:CYS129
|
4.2
|
18.1
|
1.0
|
SG
|
B:CYS159
|
4.6
|
17.9
|
1.0
|
SG
|
B:CYS64
|
4.9
|
20.0
|
1.0
|
SG
|
B:CYS65
|
4.9
|
19.7
|
1.0
|
OG
|
B:SER128
|
5.0
|
18.0
|
1.0
|
NH2
|
D:2MR85
|
5.0
|
19.9
|
1.0
|
|
Iron binding site 2 out
of 28 in 6zr2
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Iron Binding Sites List in 6zr2
Iron binding site 2 out
of 28 in the Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_02.jpg) Mono view
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_02_stereo.jpg) Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe201
b:19.5
occ:1.00
|
FE2
|
B:SF4201
|
0.0
|
19.5
|
1.0
|
S1
|
B:SF4201
|
2.3
|
19.5
|
1.0
|
S3
|
B:SF4201
|
2.3
|
19.5
|
1.0
|
S4
|
B:SF4201
|
2.3
|
19.5
|
1.0
|
SG
|
B:CYS65
|
2.3
|
19.7
|
1.0
|
FE4
|
B:SF4201
|
2.7
|
19.5
|
1.0
|
FE3
|
B:SF4201
|
2.8
|
19.5
|
1.0
|
FE1
|
B:SF4201
|
2.8
|
19.5
|
1.0
|
CB
|
B:CYS65
|
3.5
|
19.7
|
1.0
|
S2
|
B:SF4201
|
3.9
|
19.5
|
1.0
|
N
|
B:CYS65
|
3.9
|
19.7
|
1.0
|
CA
|
B:CYS65
|
4.2
|
19.7
|
1.0
|
CA
|
B:PRO160
|
4.3
|
19.1
|
1.0
|
CA
|
B:CYS159
|
4.4
|
17.9
|
1.0
|
CA
|
B:GLY127
|
4.5
|
18.4
|
1.0
|
CB
|
B:PRO160
|
4.5
|
19.1
|
1.0
|
N
|
B:PRO160
|
4.7
|
19.1
|
1.0
|
CB
|
B:CYS64
|
4.7
|
20.0
|
1.0
|
SG
|
B:CYS64
|
4.8
|
20.0
|
1.0
|
SG
|
B:CYS129
|
4.8
|
18.1
|
1.0
|
SG
|
B:CYS159
|
4.8
|
17.9
|
1.0
|
O
|
B:GLY158
|
4.8
|
17.8
|
1.0
|
C
|
B:CYS159
|
4.9
|
17.9
|
1.0
|
C
|
B:CYS64
|
4.9
|
20.0
|
1.0
|
CB
|
B:CYS129
|
4.9
|
18.1
|
1.0
|
|
Iron binding site 3 out
of 28 in 6zr2
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Iron Binding Sites List in 6zr2
Iron binding site 3 out
of 28 in the Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_03.jpg) Mono view
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_03_stereo.jpg) Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe201
b:19.5
occ:1.00
|
FE3
|
B:SF4201
|
0.0
|
19.5
|
1.0
|
S2
|
B:SF4201
|
2.3
|
19.5
|
1.0
|
S4
|
B:SF4201
|
2.3
|
19.5
|
1.0
|
S1
|
B:SF4201
|
2.3
|
19.5
|
1.0
|
SG
|
B:CYS64
|
2.3
|
20.0
|
1.0
|
FE4
|
B:SF4201
|
2.7
|
19.5
|
1.0
|
FE1
|
B:SF4201
|
2.7
|
19.5
|
1.0
|
FE2
|
B:SF4201
|
2.8
|
19.5
|
1.0
|
CB
|
B:CYS64
|
3.1
|
20.0
|
1.0
|
CE1
|
D:HIS190
|
3.8
|
18.9
|
1.0
|
S3
|
B:SF4201
|
3.9
|
19.5
|
1.0
|
N
|
B:CYS64
|
3.9
|
20.0
|
1.0
|
CA
|
B:CYS64
|
4.1
|
20.0
|
1.0
|
CQ2
|
D:2MR85
|
4.2
|
19.9
|
1.0
|
N
|
B:CYS65
|
4.2
|
19.7
|
1.0
|
CG
|
D:ARG105
|
4.5
|
18.2
|
1.0
|
C
|
B:CYS64
|
4.6
|
20.0
|
1.0
|
ND1
|
D:HIS190
|
4.6
|
18.9
|
1.0
|
NE2
|
D:HIS190
|
4.7
|
18.9
|
1.0
|
SG
|
B:CYS65
|
4.8
|
19.7
|
1.0
|
CB
|
B:ALA63
|
4.8
|
20.6
|
1.0
|
SG
|
B:CYS129
|
4.8
|
18.1
|
1.0
|
SG
|
B:CYS159
|
4.8
|
17.9
|
1.0
|
NH2
|
D:2MR85
|
5.0
|
19.9
|
1.0
|
|
Iron binding site 4 out
of 28 in 6zr2
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Iron Binding Sites List in 6zr2
Iron binding site 4 out
of 28 in the Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_04.jpg) Mono view
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_04_stereo.jpg) Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe201
b:19.5
occ:1.00
|
FE4
|
B:SF4201
|
0.0
|
19.5
|
1.0
|
SG
|
B:CYS159
|
2.3
|
17.9
|
1.0
|
S1
|
B:SF4201
|
2.3
|
19.5
|
1.0
|
S2
|
B:SF4201
|
2.3
|
19.5
|
1.0
|
S3
|
B:SF4201
|
2.3
|
19.5
|
1.0
|
FE1
|
B:SF4201
|
2.7
|
19.5
|
1.0
|
FE3
|
B:SF4201
|
2.7
|
19.5
|
1.0
|
FE2
|
B:SF4201
|
2.7
|
19.5
|
1.0
|
CB
|
B:CYS159
|
3.3
|
17.9
|
1.0
|
CA
|
B:CYS159
|
3.3
|
17.9
|
1.0
|
C
|
B:CYS159
|
3.7
|
17.9
|
1.0
|
S4
|
B:SF4201
|
3.9
|
19.5
|
1.0
|
NE
|
D:ARG105
|
4.0
|
18.2
|
1.0
|
O
|
B:CYS159
|
4.1
|
17.9
|
1.0
|
N
|
B:PRO160
|
4.2
|
19.1
|
1.0
|
CE1
|
D:HIS190
|
4.3
|
18.9
|
1.0
|
ND1
|
D:HIS190
|
4.4
|
18.9
|
1.0
|
OG
|
B:SER128
|
4.6
|
18.0
|
1.0
|
CA
|
B:PRO160
|
4.6
|
19.1
|
1.0
|
CD
|
D:ARG105
|
4.6
|
18.2
|
1.0
|
SG
|
B:CYS129
|
4.6
|
18.1
|
1.0
|
N
|
B:CYS159
|
4.7
|
17.9
|
1.0
|
O
|
B:GLY158
|
4.7
|
17.8
|
1.0
|
NH2
|
D:ARG105
|
4.7
|
18.2
|
1.0
|
CZ
|
D:ARG105
|
4.8
|
18.2
|
1.0
|
SG
|
B:CYS64
|
4.8
|
20.0
|
1.0
|
CG
|
D:ARG105
|
4.8
|
18.2
|
1.0
|
SG
|
B:CYS65
|
4.9
|
19.7
|
1.0
|
CD
|
B:PRO160
|
5.0
|
19.1
|
1.0
|
|
Iron binding site 5 out
of 28 in 6zr2
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Iron Binding Sites List in 6zr2
Iron binding site 5 out
of 28 in the Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_05.jpg) Mono view
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_05_stereo.jpg) Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe301
b:50.4
occ:1.00
|
FE1
|
E:FES301
|
0.0
|
50.4
|
1.0
|
S2
|
E:FES301
|
2.2
|
50.4
|
1.0
|
S1
|
E:FES301
|
2.2
|
50.4
|
1.0
|
SG
|
E:CYS103
|
2.3
|
47.5
|
1.0
|
SG
|
E:CYS108
|
2.3
|
49.6
|
1.0
|
FE2
|
E:FES301
|
2.7
|
50.4
|
1.0
|
CB
|
E:CYS103
|
3.3
|
47.5
|
1.0
|
OG1
|
E:THR105
|
3.3
|
45.8
|
1.0
|
CB
|
E:CYS108
|
3.4
|
49.6
|
1.0
|
CA
|
E:CYS144
|
4.2
|
45.8
|
1.0
|
N
|
E:CYS108
|
4.4
|
49.6
|
1.0
|
CA
|
E:CYS148
|
4.5
|
49.9
|
1.0
|
CA
|
E:CYS108
|
4.5
|
49.6
|
1.0
|
N
|
E:LEU145
|
4.6
|
47.3
|
1.0
|
SG
|
E:CYS144
|
4.6
|
45.8
|
1.0
|
O
|
E:ALA151
|
4.6
|
51.5
|
1.0
|
SG
|
E:CYS148
|
4.6
|
49.9
|
1.0
|
CB
|
E:CYS144
|
4.7
|
45.8
|
1.0
|
CA
|
E:CYS103
|
4.7
|
47.5
|
1.0
|
CB
|
E:CYS148
|
4.7
|
49.9
|
1.0
|
CB
|
E:THR105
|
4.8
|
45.8
|
1.0
|
C
|
E:PRO107
|
4.8
|
47.4
|
1.0
|
CB
|
E:PRO107
|
4.9
|
47.4
|
1.0
|
C
|
E:CYS144
|
4.9
|
45.8
|
1.0
|
N
|
E:CYS144
|
4.9
|
45.8
|
1.0
|
|
Iron binding site 6 out
of 28 in 6zr2
Go back to
Iron Binding Sites List in 6zr2
Iron binding site 6 out
of 28 in the Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_06.jpg) Mono view
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_06_stereo.jpg) Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe301
b:50.4
occ:1.00
|
FE2
|
E:FES301
|
0.0
|
50.4
|
1.0
|
S2
|
E:FES301
|
2.2
|
50.4
|
1.0
|
S1
|
E:FES301
|
2.2
|
50.4
|
1.0
|
SG
|
E:CYS148
|
2.3
|
49.9
|
1.0
|
SG
|
E:CYS144
|
2.3
|
45.8
|
1.0
|
FE1
|
E:FES301
|
2.7
|
50.4
|
1.0
|
CB
|
E:CYS148
|
3.2
|
49.9
|
1.0
|
CB
|
E:CYS144
|
3.3
|
45.8
|
1.0
|
CA
|
E:CYS148
|
3.6
|
49.9
|
1.0
|
CA
|
E:CYS144
|
3.6
|
45.8
|
1.0
|
N
|
E:LEU145
|
3.6
|
47.3
|
1.0
|
N
|
E:CYS148
|
3.8
|
49.9
|
1.0
|
N
|
E:GLY146
|
3.9
|
47.6
|
1.0
|
C
|
E:CYS144
|
4.1
|
45.8
|
1.0
|
N
|
F:GLY103
|
4.3
|
48.1
|
1.0
|
SG
|
E:CYS103
|
4.3
|
47.5
|
1.0
|
OG1
|
E:THR105
|
4.4
|
45.8
|
1.0
|
SG
|
E:CYS108
|
4.4
|
49.6
|
1.0
|
CA
|
F:PRO102
|
4.5
|
44.5
|
1.0
|
N
|
E:ALA147
|
4.6
|
49.6
|
1.0
|
C
|
E:ALA147
|
4.6
|
49.6
|
1.0
|
CA
|
E:LEU145
|
4.7
|
47.3
|
1.0
|
CA
|
E:GLY146
|
4.7
|
47.6
|
1.0
|
C
|
E:LEU145
|
4.7
|
47.3
|
1.0
|
N
|
E:CYS144
|
4.8
|
45.8
|
1.0
|
C
|
F:PRO102
|
4.9
|
44.5
|
1.0
|
C
|
E:GLY146
|
5.0
|
47.6
|
1.0
|
CB
|
E:PRO107
|
5.0
|
47.4
|
1.0
|
CG
|
E:PRO107
|
5.0
|
47.4
|
1.0
|
|
Iron binding site 7 out
of 28 in 6zr2
Go back to
Iron Binding Sites List in 6zr2
Iron binding site 7 out
of 28 in the Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_07.jpg) Mono view
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_07_stereo.jpg) Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe502
b:33.6
occ:1.00
|
FE1
|
F:SF4502
|
0.0
|
33.6
|
1.0
|
SG
|
F:CYS362
|
2.3
|
30.0
|
1.0
|
S4
|
F:SF4502
|
2.3
|
33.6
|
1.0
|
S3
|
F:SF4502
|
2.3
|
33.6
|
1.0
|
S2
|
F:SF4502
|
2.3
|
33.6
|
1.0
|
FE2
|
F:SF4502
|
2.7
|
33.6
|
1.0
|
FE4
|
F:SF4502
|
2.7
|
33.6
|
1.0
|
FE3
|
F:SF4502
|
2.7
|
33.6
|
1.0
|
CB
|
F:CYS362
|
3.4
|
30.0
|
1.0
|
S1
|
F:SF4502
|
3.9
|
33.6
|
1.0
|
O
|
F:CYS362
|
4.0
|
30.0
|
1.0
|
CB
|
F:CYS365
|
4.0
|
30.6
|
1.0
|
N
|
F:CYS362
|
4.0
|
30.0
|
1.0
|
CA
|
F:CYS362
|
4.1
|
30.0
|
1.0
|
C
|
F:CYS362
|
4.4
|
30.0
|
1.0
|
N
|
F:ILE404
|
4.4
|
31.2
|
1.0
|
SG
|
F:CYS365
|
4.5
|
30.6
|
1.0
|
CB
|
F:THR403
|
4.6
|
30.7
|
1.0
|
CG2
|
F:THR403
|
4.7
|
30.7
|
1.0
|
SG
|
F:CYS359
|
4.7
|
32.8
|
1.0
|
N
|
F:CYS405
|
4.8
|
34.5
|
1.0
|
CB
|
F:ILE404
|
4.8
|
31.2
|
1.0
|
SG
|
F:CYS405
|
4.8
|
34.5
|
1.0
|
N
|
F:CYS365
|
5.0
|
30.6
|
1.0
|
|
Iron binding site 8 out
of 28 in 6zr2
Go back to
Iron Binding Sites List in 6zr2
Iron binding site 8 out
of 28 in the Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_08.jpg) Mono view
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_08_stereo.jpg) Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe502
b:33.6
occ:1.00
|
FE2
|
F:SF4502
|
0.0
|
33.6
|
1.0
|
SG
|
F:CYS365
|
2.2
|
30.6
|
1.0
|
S1
|
F:SF4502
|
2.3
|
33.6
|
1.0
|
S3
|
F:SF4502
|
2.3
|
33.6
|
1.0
|
S4
|
F:SF4502
|
2.3
|
33.6
|
1.0
|
FE1
|
F:SF4502
|
2.7
|
33.6
|
1.0
|
FE4
|
F:SF4502
|
2.7
|
33.6
|
1.0
|
FE3
|
F:SF4502
|
2.7
|
33.6
|
1.0
|
CB
|
F:CYS365
|
2.8
|
30.6
|
1.0
|
OG
|
F:SER358
|
3.2
|
33.9
|
1.0
|
S2
|
F:SF4502
|
3.9
|
33.6
|
1.0
|
CD2
|
F:LEU407
|
4.1
|
36.5
|
1.0
|
CA
|
F:CYS365
|
4.2
|
30.6
|
1.0
|
CB
|
F:SER358
|
4.3
|
33.9
|
1.0
|
N
|
F:CYS359
|
4.3
|
32.8
|
1.0
|
CB
|
F:LEU407
|
4.3
|
36.5
|
1.0
|
CA
|
F:SER358
|
4.5
|
33.9
|
1.0
|
C
|
F:CYS365
|
4.5
|
30.6
|
1.0
|
SG
|
F:CYS362
|
4.6
|
30.0
|
1.0
|
SG
|
F:CYS405
|
4.6
|
34.5
|
1.0
|
CG
|
F:LEU407
|
4.7
|
36.5
|
1.0
|
SG
|
F:CYS359
|
4.8
|
32.8
|
1.0
|
N
|
F:GLY360
|
4.8
|
31.1
|
1.0
|
O
|
F:CYS365
|
4.8
|
30.6
|
1.0
|
N
|
F:GLY408
|
4.9
|
35.4
|
1.0
|
N
|
F:CYS365
|
4.9
|
30.6
|
1.0
|
C
|
F:SER358
|
4.9
|
33.9
|
1.0
|
|
Iron binding site 9 out
of 28 in 6zr2
Go back to
Iron Binding Sites List in 6zr2
Iron binding site 9 out
of 28 in the Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_09.jpg) Mono view
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_09_stereo.jpg) Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe502
b:33.6
occ:1.00
|
FE3
|
F:SF4502
|
0.0
|
33.6
|
1.0
|
SG
|
F:CYS405
|
2.3
|
34.5
|
1.0
|
S4
|
F:SF4502
|
2.3
|
33.6
|
1.0
|
S2
|
F:SF4502
|
2.3
|
33.6
|
1.0
|
S1
|
F:SF4502
|
2.3
|
33.6
|
1.0
|
FE2
|
F:SF4502
|
2.7
|
33.6
|
1.0
|
FE4
|
F:SF4502
|
2.7
|
33.6
|
1.0
|
FE1
|
F:SF4502
|
2.7
|
33.6
|
1.0
|
CB
|
F:CYS405
|
3.3
|
34.5
|
1.0
|
S3
|
F:SF4502
|
3.9
|
33.6
|
1.0
|
CB
|
F:LEU407
|
4.0
|
36.5
|
1.0
|
N
|
F:CYS405
|
4.0
|
34.5
|
1.0
|
CA
|
F:CYS405
|
4.1
|
34.5
|
1.0
|
CD1
|
F:ILE185
|
4.3
|
37.3
|
1.0
|
CG
|
F:PRO203
|
4.4
|
34.4
|
1.0
|
C
|
F:CYS405
|
4.5
|
34.5
|
1.0
|
N
|
F:LEU407
|
4.5
|
36.5
|
1.0
|
SG
|
F:CYS365
|
4.8
|
30.6
|
1.0
|
SG
|
F:CYS359
|
4.8
|
32.8
|
1.0
|
CA
|
F:LEU407
|
4.8
|
36.5
|
1.0
|
CD
|
F:PRO203
|
4.8
|
34.4
|
1.0
|
SG
|
F:CYS362
|
4.8
|
30.0
|
1.0
|
O
|
F:CYS405
|
4.8
|
34.5
|
1.0
|
N
|
F:GLY408
|
5.0
|
35.4
|
1.0
|
CG1
|
F:ILE185
|
5.0
|
37.3
|
1.0
|
N
|
F:ALA406
|
5.0
|
37.1
|
1.0
|
|
Iron binding site 10 out
of 28 in 6zr2
Go back to
Iron Binding Sites List in 6zr2
Iron binding site 10 out
of 28 in the Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_10.jpg) Mono view
![](/pictures/FE/pdb/zr/6zr2-FE-sphere_10_stereo.jpg) Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Cryo-Em Structure of Respiratory Complex I in the Active State From Mus Musculus at 3.1 A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe502
b:33.6
occ:1.00
|
FE4
|
F:SF4502
|
0.0
|
33.6
|
1.0
|
SG
|
F:CYS359
|
2.2
|
32.8
|
1.0
|
S3
|
F:SF4502
|
2.3
|
33.6
|
1.0
|
S1
|
F:SF4502
|
2.3
|
33.6
|
1.0
|
S2
|
F:SF4502
|
2.3
|
33.6
|
1.0
|
FE2
|
F:SF4502
|
2.7
|
33.6
|
1.0
|
FE3
|
F:SF4502
|
2.7
|
33.6
|
1.0
|
FE1
|
F:SF4502
|
2.7
|
33.6
|
1.0
|
CB
|
F:CYS359
|
3.3
|
32.8
|
1.0
|
N
|
F:GLY360
|
3.6
|
31.1
|
1.0
|
N
|
F:CYS359
|
3.7
|
32.8
|
1.0
|
S4
|
F:SF4502
|
3.9
|
33.6
|
1.0
|
CA
|
F:CYS359
|
4.0
|
32.8
|
1.0
|
N
|
F:GLN361
|
4.2
|
31.3
|
1.0
|
C
|
F:CYS359
|
4.3
|
32.8
|
1.0
|
CD
|
F:PRO203
|
4.3
|
34.4
|
1.0
|
CG
|
F:GLN361
|
4.6
|
31.3
|
1.0
|
OG
|
F:SER358
|
4.6
|
33.9
|
1.0
|
CA
|
F:GLY360
|
4.6
|
31.1
|
1.0
|
N
|
F:CYS362
|
4.7
|
30.0
|
1.0
|
SG
|
F:CYS365
|
4.8
|
30.6
|
1.0
|
CG
|
F:PRO203
|
4.8
|
34.4
|
1.0
|
SG
|
F:CYS362
|
4.8
|
30.0
|
1.0
|
SG
|
F:CYS405
|
4.8
|
34.5
|
1.0
|
C
|
F:GLY360
|
4.9
|
31.1
|
1.0
|
C
|
F:SER358
|
4.9
|
33.9
|
1.0
|
CG1
|
F:ILE185
|
5.0
|
37.3
|
1.0
|
|
Reference:
H.R.Bridges,
J.G.Fedor,
J.N.Blaza,
A.Di Luca,
A.Jussupow,
O.D.Jarman,
J.J.Wright,
A.A.Agip,
A.P.Gamiz-Hernandez,
M.M.Roessler,
V.R.I.Kaila,
J.Hirst.
Structure of Inhibitor-Bound Mammalian Complex I. Nat Commun V. 11 5261 2020.
ISSN: ESSN 2041-1723
PubMed: 33067417
DOI: 10.1038/S41467-020-18950-3
Page generated: Wed Aug 7 20:44:54 2024
|