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Iron in PDB 6zsk: Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): Co Complex

Protein crystallography data

The structure of Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): Co Complex, PDB code: 6zsk was solved by H.R.Adams, M.A.Hough, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.22 / 1.60
Space group P 21 3
Cell size a, b, c (Å), α, β, γ (°) 105.49, 105.49, 105.49, 90, 90, 90
R / Rfree (%) 18.1 / 19.8

Other elements in 6zsk:

The structure of Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): Co Complex also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): Co Complex (pdb code 6zsk). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): Co Complex, PDB code: 6zsk:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 6zsk

Go back to Iron Binding Sites List in 6zsk
Iron binding site 1 out of 2 in the Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): Co Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): Co Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:26.1
occ:1.00
FE A:HEC201 0.0 26.1 1.0
C A:CMO205 1.8 27.6 1.0
NA A:HEC201 2.0 24.7 1.0
NB A:HEC201 2.0 23.8 1.0
NC A:HEC201 2.0 26.6 1.0
ND A:HEC201 2.0 25.4 1.0
NE2 A:HIS123 2.1 25.5 1.0
O A:CMO205 2.9 28.8 1.0
C1A A:HEC201 3.0 24.1 1.0
C4B A:HEC201 3.0 27.4 1.0
CE1 A:HIS123 3.0 26.4 1.0
C1B A:HEC201 3.0 26.0 1.0
C1D A:HEC201 3.0 28.5 1.0
C4D A:HEC201 3.0 25.7 1.0
C1C A:HEC201 3.0 30.2 1.0
C4C A:HEC201 3.1 31.8 1.0
C4A A:HEC201 3.1 24.0 1.0
CD2 A:HIS123 3.1 25.8 1.0
CHC A:HEC201 3.3 27.4 1.0
CHD A:HEC201 3.4 31.6 1.0
CHA A:HEC201 3.4 25.3 1.0
CHB A:HEC201 3.4 24.2 1.0
ND1 A:HIS123 4.2 27.8 1.0
C2D A:HEC201 4.2 27.6 1.0
C2B A:HEC201 4.2 27.4 1.0
C3B A:HEC201 4.2 27.9 1.0
C3A A:HEC201 4.2 23.5 1.0
C3D A:HEC201 4.3 27.6 1.0
CG A:HIS123 4.3 27.2 1.0
C2A A:HEC201 4.3 22.3 1.0
C2C A:HEC201 4.3 32.6 1.0
C3C A:HEC201 4.3 32.7 1.0
CE1 A:PHE32 4.8 52.4 1.0

Iron binding site 2 out of 2 in 6zsk

Go back to Iron Binding Sites List in 6zsk
Iron binding site 2 out of 2 in the Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): Co Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cytochrome C Prime Beta From Methylococcus Capsulatus (Bath): Co Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:27.0
occ:1.00
FE B:HEC201 0.0 27.0 1.0
C B:CMO204 1.9 30.9 1.0
ND B:HEC201 2.0 27.7 1.0
NB B:HEC201 2.0 27.9 1.0
NA B:HEC201 2.0 25.5 1.0
NC B:HEC201 2.1 28.3 1.0
NE2 B:HIS123 2.1 29.1 1.0
C1A B:HEC201 3.0 25.3 1.0
O B:CMO204 3.0 33.0 1.0
C4D B:HEC201 3.0 25.4 1.0
C1D B:HEC201 3.0 28.8 1.0
C1B B:HEC201 3.0 28.3 1.0
CE1 B:HIS123 3.0 28.9 1.0
C4A B:HEC201 3.0 26.0 1.0
C1C B:HEC201 3.0 29.6 1.0
C4C B:HEC201 3.1 29.2 1.0
C4B B:HEC201 3.1 28.4 1.0
CD2 B:HIS123 3.1 26.5 1.0
CHA B:HEC201 3.3 24.4 1.0
CHC B:HEC201 3.4 27.9 1.0
CHD B:HEC201 3.4 30.7 1.0
CHB B:HEC201 3.4 26.3 1.0
ND1 B:HIS123 4.2 27.8 1.0
C2A B:HEC201 4.2 25.8 1.0
C3D B:HEC201 4.2 26.0 1.0
C2D B:HEC201 4.2 26.0 1.0
C3A B:HEC201 4.2 25.4 1.0
C2C B:HEC201 4.2 29.3 1.0
CG B:HIS123 4.3 29.5 1.0
C3C B:HEC201 4.3 31.1 1.0
C2B B:HEC201 4.3 30.2 1.0
C3B B:HEC201 4.3 31.1 1.0
CE2 B:PHE32 5.0 38.4 1.0

Reference:

H.R.Adams, R.W.Strange, D.A.Svistunenko, C.R.Andrew, M.A.Hough. To Be Published To Be Published.
Page generated: Wed Aug 7 20:46:27 2024

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