Atomistry » Iron » PDB 6zzx-7ah6 » 6zzy
Atomistry »
  Iron »
    PDB 6zzx-7ah6 »
      6zzy »

Iron in PDB 6zzy: Structure of High-Light Grown Chlorella Ohadii Photosystem I

Enzymatic activity of Structure of High-Light Grown Chlorella Ohadii Photosystem I

All present enzymatic activity of Structure of High-Light Grown Chlorella Ohadii Photosystem I:
1.97.1.12;

Other elements in 6zzy:

The structure of Structure of High-Light Grown Chlorella Ohadii Photosystem I also contains other interesting chemical elements:

Magnesium (Mg) 252 atoms

Iron Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Iron atom in the Structure of High-Light Grown Chlorella Ohadii Photosystem I (pdb code 6zzy). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 12 binding sites of Iron where determined in the Structure of High-Light Grown Chlorella Ohadii Photosystem I, PDB code: 6zzy:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 12 in 6zzy

Go back to Iron Binding Sites List in 6zzy
Iron binding site 1 out of 12 in the Structure of High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe3001

b:13.9
occ:1.00
FE1 A:SF43001 0.0 13.9 1.0
SG B:CYS569 2.2 10.1 1.0
S4 A:SF43001 2.3 13.9 1.0
S2 A:SF43001 2.3 13.9 1.0
S3 A:SF43001 2.3 13.9 1.0
FE2 A:SF43001 2.7 13.9 1.0
FE3 A:SF43001 2.7 13.9 1.0
FE4 A:SF43001 2.7 13.9 1.0
CB B:CYS569 3.4 10.1 1.0
CA B:CYS569 3.7 10.1 1.0
S1 A:SF43001 3.9 13.9 1.0
N B:CYS569 4.0 10.1 1.0
CZ3 B:TRP668 4.2 8.1 1.0
CD1 A:ILE720 4.3 13.2 1.0
CB B:CYS560 4.5 10.2 1.0
SG B:CYS560 4.7 10.2 1.0
C B:THR568 4.7 10.3 1.0
CG2 A:ILE720 4.8 13.2 1.0
CE3 B:TRP668 4.8 8.1 1.0
SG A:CYS575 4.8 10.2 1.0
SG A:CYS584 4.9 10.8 1.0
CG1 A:ILE720 5.0 13.2 1.0

Iron binding site 2 out of 12 in 6zzy

Go back to Iron Binding Sites List in 6zzy
Iron binding site 2 out of 12 in the Structure of High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe3001

b:13.9
occ:1.00
FE2 A:SF43001 0.0 13.9 1.0
SG A:CYS584 2.2 10.8 1.0
S4 A:SF43001 2.3 13.9 1.0
S3 A:SF43001 2.3 13.9 1.0
S1 A:SF43001 2.3 13.9 1.0
FE1 A:SF43001 2.7 13.9 1.0
FE3 A:SF43001 2.7 13.9 1.0
FE4 A:SF43001 2.7 13.9 1.0
CB A:CYS584 3.3 10.8 1.0
S2 A:SF43001 3.9 13.9 1.0
CA A:CYS584 4.0 10.8 1.0
CD1 B:ILE703 4.3 11.6 1.0
CE3 B:TRP668 4.3 8.1 1.0
N A:CYS584 4.4 10.8 1.0
CZ3 B:TRP668 4.5 8.1 1.0
CB A:CYS575 4.6 10.2 1.0
SG A:CYS575 4.7 10.2 1.0
SG B:CYS569 4.7 10.1 1.0
CG1 B:ILE703 4.8 11.6 1.0
SG B:CYS560 4.9 10.2 1.0
CG2 B:ILE703 4.9 11.6 1.0

Iron binding site 3 out of 12 in 6zzy

Go back to Iron Binding Sites List in 6zzy
Iron binding site 3 out of 12 in the Structure of High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Structure of High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe3001

b:13.9
occ:1.00
FE3 A:SF43001 0.0 13.9 1.0
SG A:CYS575 2.2 10.2 1.0
S1 A:SF43001 2.3 13.9 1.0
S2 A:SF43001 2.3 13.9 1.0
S4 A:SF43001 2.3 13.9 1.0
FE1 A:SF43001 2.7 13.9 1.0
FE4 A:SF43001 2.7 13.9 1.0
FE2 A:SF43001 2.7 13.9 1.0
CB A:CYS575 3.1 10.2 1.0
S3 A:SF43001 3.9 13.9 1.0
CA A:CYS575 4.5 10.2 1.0
N B:PRO563 4.6 8.9 1.0
SG A:CYS584 4.6 10.8 1.0
N A:GLY577 4.6 9.3 1.0
SG B:CYS560 4.6 10.2 1.0
SG B:CYS569 4.7 10.1 1.0
CD B:PRO563 4.7 8.9 1.0
CD1 A:ILE720 4.7 13.2 1.0
CA A:GLY577 4.7 9.3 1.0
C B:GLY562 4.7 8.7 1.0
C A:GLY577 4.8 9.3 1.0
CB B:PRO563 4.8 8.9 1.0
N A:CYS575 4.9 10.2 1.0
CA B:PRO563 4.9 8.9 1.0
O A:GLY577 4.9 9.3 1.0
CA B:GLY562 5.0 8.7 1.0
CA A:CYS584 5.0 10.8 1.0

Iron binding site 4 out of 12 in 6zzy

Go back to Iron Binding Sites List in 6zzy
Iron binding site 4 out of 12 in the Structure of High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Structure of High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe3001

b:13.9
occ:1.00
FE4 A:SF43001 0.0 13.9 1.0
SG B:CYS560 2.2 10.2 1.0
S1 A:SF43001 2.3 13.9 1.0
S2 A:SF43001 2.3 13.9 1.0
S3 A:SF43001 2.3 13.9 1.0
FE1 A:SF43001 2.7 13.9 1.0
FE3 A:SF43001 2.7 13.9 1.0
FE2 A:SF43001 2.7 13.9 1.0
CB B:CYS560 2.9 10.2 1.0
S4 A:SF43001 3.9 13.9 1.0
CA B:CYS560 4.4 10.2 1.0
N B:GLY562 4.4 8.7 1.0
CA B:GLY562 4.5 8.7 1.0
N A:PRO578 4.6 9.3 1.0
CB A:PRO578 4.6 9.3 1.0
SG A:CYS584 4.7 10.8 1.0
SG A:CYS575 4.7 10.2 1.0
CD A:PRO578 4.7 9.3 1.0
N B:CYS560 4.8 10.2 1.0
CA A:PRO578 4.8 9.3 1.0
C B:GLY562 4.8 8.7 1.0
SG B:CYS569 4.8 10.1 1.0
C A:GLY577 4.9 9.3 1.0
N B:ASP561 4.9 10.2 1.0
CD1 B:ILE703 4.9 11.6 1.0
O B:GLY562 5.0 8.7 1.0

Iron binding site 5 out of 12 in 6zzy

Go back to Iron Binding Sites List in 6zzy
Iron binding site 5 out of 12 in the Structure of High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Structure of High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe3002

b:17.9
occ:1.00
FE1 C:SF43002 0.0 17.9 1.0
SG C:CYS54 2.3 12.9 1.0
S4 C:SF43002 2.3 17.9 1.0
S2 C:SF43002 2.3 17.9 1.0
S3 C:SF43002 2.3 17.9 1.0
FE3 C:SF43002 2.7 17.9 1.0
FE2 C:SF43002 2.7 17.9 1.0
FE4 C:SF43002 2.7 17.9 1.0
CB C:CYS54 3.4 12.9 1.0
CG2 C:VAL67 3.8 13.8 1.0
S1 C:SF43002 3.9 17.9 1.0
N C:CYS54 3.9 12.9 1.0
CA C:CYS54 4.3 12.9 1.0
N C:LYS52 4.4 10.9 1.0
CA C:LYS52 4.4 10.9 1.0
N C:ARG53 4.5 12.0 1.0
CD1 C:LEU26 4.7 18.5 1.0
SG C:CYS48 4.7 19.3 1.0
SG C:CYS51 4.8 11.8 1.0
C C:LYS52 4.8 10.9 1.0
SG C:CYS21 4.8 17.0 1.0

Iron binding site 6 out of 12 in 6zzy

Go back to Iron Binding Sites List in 6zzy
Iron binding site 6 out of 12 in the Structure of High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Structure of High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe3002

b:17.9
occ:1.00
FE2 C:SF43002 0.0 17.9 1.0
SG C:CYS51 2.3 11.8 1.0
S4 C:SF43002 2.3 17.9 1.0
S1 C:SF43002 2.3 17.9 1.0
S3 C:SF43002 2.3 17.9 1.0
FE3 C:SF43002 2.7 17.9 1.0
FE4 C:SF43002 2.7 17.9 1.0
FE1 C:SF43002 2.7 17.9 1.0
N C:CYS51 3.5 11.8 1.0
N C:LYS52 3.5 10.9 1.0
CB C:CYS51 3.7 11.8 1.0
CA C:CYS51 3.9 11.8 1.0
S2 C:SF43002 3.9 17.9 1.0
CD C:PRO22 4.0 18.0 1.0
C C:CYS51 4.1 11.8 1.0
N C:ARG53 4.1 12.0 1.0
C C:GLY50 4.3 11.8 1.0
CA C:LYS52 4.4 10.9 1.0
N C:GLY50 4.4 11.8 1.0
CG2 C:VAL49 4.4 16.5 1.0
SG C:CYS48 4.7 19.3 1.0
CA C:GLY50 4.7 11.8 1.0
CG C:PRO22 4.7 18.0 1.0
SG C:CYS54 4.7 12.9 1.0
SG C:CYS21 4.7 17.0 1.0
C C:LYS52 4.8 10.9 1.0
CB C:ARG53 4.8 12.0 1.0
N C:CYS54 4.9 12.9 1.0
CA C:ARG53 5.0 12.0 1.0

Iron binding site 7 out of 12 in 6zzy

Go back to Iron Binding Sites List in 6zzy
Iron binding site 7 out of 12 in the Structure of High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Structure of High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe3002

b:17.9
occ:1.00
FE3 C:SF43002 0.0 17.9 1.0
SG C:CYS21 2.3 17.0 1.0
S2 C:SF43002 2.3 17.9 1.0
S1 C:SF43002 2.3 17.9 1.0
S4 C:SF43002 2.3 17.9 1.0
FE2 C:SF43002 2.7 17.9 1.0
FE4 C:SF43002 2.7 17.9 1.0
FE1 C:SF43002 2.7 17.9 1.0
CB C:CYS21 3.3 17.0 1.0
CA C:CYS21 3.8 17.0 1.0
S3 C:SF43002 3.9 17.9 1.0
CD C:PRO22 4.0 18.0 1.0
CG2 C:VAL25 4.0 19.8 1.0
CB C:VAL25 4.1 19.8 1.0
OG1 C:THR23 4.3 21.5 1.0
N C:PRO22 4.6 18.0 1.0
C C:CYS21 4.6 17.0 1.0
SG C:CYS51 4.6 11.8 1.0
SG C:CYS54 4.7 12.9 1.0
SG C:CYS48 4.9 19.3 1.0
CD1 C:LEU26 4.9 18.5 1.0
N C:CYS21 4.9 17.0 1.0
N C:VAL25 4.9 19.8 1.0
CG C:LEU26 5.0 18.5 1.0
CG1 C:VAL25 5.0 19.8 1.0

Iron binding site 8 out of 12 in 6zzy

Go back to Iron Binding Sites List in 6zzy
Iron binding site 8 out of 12 in the Structure of High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Structure of High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe3002

b:17.9
occ:1.00
FE4 C:SF43002 0.0 17.9 1.0
SG C:CYS48 2.3 19.3 1.0
S3 C:SF43002 2.3 17.9 1.0
S1 C:SF43002 2.3 17.9 1.0
S2 C:SF43002 2.3 17.9 1.0
FE3 C:SF43002 2.7 17.9 1.0
FE2 C:SF43002 2.7 17.9 1.0
FE1 C:SF43002 2.7 17.9 1.0
CB C:CYS48 3.4 19.3 1.0
CA C:CYS48 3.9 19.3 1.0
S4 C:SF43002 3.9 17.9 1.0
N C:GLY50 4.0 11.8 1.0
N C:VAL49 4.2 16.5 1.0
CG2 C:VAL25 4.3 19.8 1.0
C C:CYS48 4.4 19.3 1.0
CA C:GLY50 4.4 11.8 1.0
CG2 C:VAL5 4.5 17.4 1.0
N C:CYS51 4.7 11.8 1.0
CB C:VAL25 4.7 19.8 1.0
CG2 C:VAL67 4.8 13.8 1.0
SG C:CYS21 4.8 17.0 1.0
CG1 C:VAL67 4.8 13.8 1.0
CG1 C:VAL25 4.9 19.8 1.0
SG C:CYS51 4.9 11.8 1.0
SG C:CYS54 4.9 12.9 1.0
C C:GLY50 4.9 11.8 1.0

Iron binding site 9 out of 12 in 6zzy

Go back to Iron Binding Sites List in 6zzy
Iron binding site 9 out of 12 in the Structure of High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Structure of High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe3003

b:21.8
occ:1.00
FE1 C:SF43003 0.0 21.8 1.0
SG C:CYS58 2.3 14.4 1.0
S3 C:SF43003 2.3 21.8 1.0
S2 C:SF43003 2.3 21.8 1.0
S4 C:SF43003 2.3 21.8 1.0
FE4 C:SF43003 2.7 21.8 1.0
FE3 C:SF43003 2.7 21.8 1.0
FE2 C:SF43003 2.7 21.8 1.0
CB C:CYS58 3.4 14.4 1.0
CA C:CYS58 3.8 14.4 1.0
S1 C:SF43003 3.9 21.8 1.0
CD C:PRO59 4.2 14.9 1.0
CB C:SER64 4.3 16.6 1.0
CG1 C:VAL65 4.3 14.6 1.0
OG1 C:THR60 4.5 15.9 1.0
SG C:CYS14 4.6 21.8 1.0
CB C:CYS17 4.6 17.6 1.0
N C:SER64 4.6 16.6 1.0
N C:VAL65 4.7 14.6 1.0
OG C:SER64 4.7 16.6 1.0
C C:CYS58 4.7 14.4 1.0
N C:PRO59 4.8 14.9 1.0
SG C:CYS17 4.8 17.6 1.0
N C:CYS58 4.9 14.4 1.0
SG C:CYS11 4.9 20.7 1.0
CB C:VAL65 4.9 14.6 1.0
CA C:SER64 4.9 16.6 1.0

Iron binding site 10 out of 12 in 6zzy

Go back to Iron Binding Sites List in 6zzy
Iron binding site 10 out of 12 in the Structure of High-Light Grown Chlorella Ohadii Photosystem I


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Structure of High-Light Grown Chlorella Ohadii Photosystem I within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe3003

b:21.8
occ:1.00
FE2 C:SF43003 0.0 21.8 1.0
SG C:CYS17 2.3 17.6 1.0
S4 C:SF43003 2.3 21.8 1.0
S3 C:SF43003 2.3 21.8 1.0
S1 C:SF43003 2.3 21.8 1.0
FE4 C:SF43003 2.7 21.8 1.0
FE1 C:SF43003 2.7 21.8 1.0
FE3 C:SF43003 2.7 21.8 1.0
CB C:CYS17 2.8 17.6 1.0
N C:CYS17 3.6 17.6 1.0
CA C:CYS17 3.8 17.6 1.0
S2 C:SF43003 3.9 21.8 1.0
CB C:ALA40 4.3 23.2 1.0
CG1 C:VAL65 4.5 14.6 1.0
N C:GLN16 4.5 20.1 1.0
SG C:CYS11 4.7 20.7 1.0
N C:VAL18 4.8 18.5 1.0
C C:CYS17 4.8 17.6 1.0
C C:GLN16 4.8 20.1 1.0
CB C:VAL65 4.8 14.6 1.0
SG C:CYS14 4.8 21.8 1.0
SG C:CYS58 4.8 14.4 1.0
N C:THR15 4.9 21.2 1.0
C C:THR15 5.0 21.2 1.0

Reference:

I.Caspy, N.Nelson, R.Nechushtai, Y.Shkolnisky, E.Neumann. Structural and Functional Alterations in Photosystem I of Chlorella Ohadii Grown at High and Low Light Conditions To Be Published.
Page generated: Wed Aug 7 21:40:55 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy