Iron in PDB 7a1g: Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex

The structure of Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex also contains other interesting chemical elements:

Magnesium	(Mg)	80 atoms
Zinc	(Zn)	2 atoms

The binding sites of Iron atom in the Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex (pdb code 7a1g). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex, PDB code: 7a1g:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Iron binding site 1 out of 8 in the Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex within 5.0Å range: probe atom residue distance (Å) B Occ x:Fe701 b:8.2 occ:1.00 FE1 x:SF4701 0.0 8.2 1.0 S4 x:SF4701 2.3 8.2 1.0 S3 x:SF4701 2.3 8.2 1.0 S2 x:SF4701 2.3 8.2 1.0 SG x:CYS21 2.3 11.7 1.0 FE3 x:SF4701 2.7 8.2 1.0 FE4 x:SF4701 2.7 8.2 1.0 FE2 x:SF4701 2.7 8.2 1.0 CB x:CYS21 3.4 11.7 1.0 S1 x:SF4701 3.9 8.2 1.0 SG x:CYS25 4.1 6.3 1.0 CA x:PRO18 4.2 8.0 1.0 CA x:GLN23 4.2 9.5 1.0 SG x:CYS16 4.3 7.7 1.0 CG2 x:VAL41 4.5 7.3 1.0 N x:GLN23 4.5 9.5 1.0 CG x:PRO18 4.6 8.0 1.0 CB x:PRO18 4.6 8.0 1.0 N x:PRO18 4.6 8.0 1.0 CB x:ALA48 4.7 7.6 1.0 CA x:CYS21 4.8 11.7 1.0 CG x:GLN23 4.8 9.5 1.0

Iron binding site 2 out of 8 in the Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex within 5.0Å range: probe atom residue distance (Å) B Occ x:Fe701 b:8.2 occ:1.00 FE2 x:SF4701 0.0 8.2 1.0 S1 x:SF4701 2.3 8.2 1.0 S3 x:SF4701 2.3 8.2 1.0 S4 x:SF4701 2.3 8.2 1.0 FE4 x:SF4701 2.7 8.2 1.0 FE1 x:SF4701 2.7 8.2 1.0 FE3 x:SF4701 2.7 8.2 1.0 SG x:CYS25 3.5 6.3 1.0 SG x:CYS16 3.7 7.7 1.0 S2 x:SF4701 3.9 8.2 1.0 CB x:CYS25 3.9 6.3 1.0 CB x:ALA48 4.0 7.6 1.0 SG x:CYS65 4.2 6.6 1.0 CD1 x:ILE70 4.4 5.0 1.0 CG1 x:ILE70 4.5 5.0 1.0 CG2 x:VAL11 4.7 5.0 1.0 CB x:ALA69 4.7 5.0 1.0 CB x:CYS16 4.8 7.7 1.0 SG x:CYS21 4.9 11.7 1.0

Iron binding site 3 out of 8 in the Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex within 5.0Å range: probe atom residue distance (Å) B Occ x:Fe701 b:8.2 occ:1.00 FE3 x:SF4701 0.0 8.2 1.0 S2 x:SF4701 2.3 8.2 1.0 S4 x:SF4701 2.3 8.2 1.0 S1 x:SF4701 2.3 8.2 1.0 FE1 x:SF4701 2.7 8.2 1.0 FE2 x:SF4701 2.7 8.2 1.0 FE4 x:SF4701 2.7 8.2 1.0 SG x:CYS16 3.5 7.7 1.0 CB x:CYS21 3.5 11.7 1.0 SG x:CYS65 3.8 6.6 1.0 CD2 x:PHE67 3.8 7.3 1.0 SG x:CYS21 3.9 11.7 1.0 S3 x:SF4701 3.9 8.2 1.0 N x:LYS17 3.9 8.9 1.0 CA x:CYS16 4.0 7.7 1.0 CE2 x:PHE67 4.1 7.3 1.0 CB x:CYS16 4.1 7.7 1.0 C x:CYS16 4.4 7.7 1.0 CB x:ALA69 4.4 5.0 1.0 C x:LYS17 4.6 8.9 1.0 O x:LYS17 4.7 8.9 1.0 N x:PRO18 4.8 8.0 1.0 CG x:PHE67 4.9 7.3 1.0 O x:LYS15 4.9 8.6 1.0 CA x:CYS21 4.9 11.7 1.0 CA x:LYS17 5.0 8.9 1.0

Iron binding site 4 out of 8 in the Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex within 5.0Å range: probe atom residue distance (Å) B Occ x:Fe701 b:8.2 occ:1.00 FE4 x:SF4701 0.0 8.2 1.0 S1 x:SF4701 2.3 8.2 1.0 S3 x:SF4701 2.3 8.2 1.0 S2 x:SF4701 2.3 8.2 1.0 FE1 x:SF4701 2.7 8.2 1.0 FE2 x:SF4701 2.7 8.2 1.0 FE3 x:SF4701 2.7 8.2 1.0 SG x:CYS65 3.2 6.6 1.0 CB x:CYS21 3.7 11.7 1.0 SG x:CYS21 3.7 11.7 1.0 S4 x:SF4701 3.9 8.2 1.0 N x:CYS25 4.0 6.3 1.0 CB x:CYS25 4.0 6.3 1.0 SG x:CYS25 4.1 6.3 1.0 CD x:PRO66 4.1 7.3 1.0 CB x:CYS65 4.2 6.6 1.0 N x:GLU24 4.2 9.2 1.0 CA x:CYS65 4.5 6.6 1.0 CG x:PRO66 4.5 7.3 1.0 O x:CYS21 4.6 11.7 1.0 CA x:CYS25 4.7 6.3 1.0 CA x:GLN23 4.7 9.5 1.0 C x:GLN23 4.8 9.5 1.0 C x:GLU24 4.9 9.2 1.0 CA x:GLU24 4.9 9.2 1.0 CB x:GLU24 4.9 9.2 1.0 CA x:CYS21 4.9 11.7 1.0 N x:GLN23 4.9 9.5 1.0 N x:PRO66 5.0 7.3 1.0

Iron binding site 5 out of 8 in the Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex within 5.0Å range: probe atom residue distance (Å) B Occ x:Fe702 b:5.0 occ:1.00 FE1 x:SF4702 0.0 5.0 1.0 SG x:CYS29 2.3 5.0 1.0 S3 x:SF4702 2.3 5.0 1.0 S4 x:SF4702 2.3 5.0 1.0 S2 x:SF4702 2.3 5.0 1.0 FE4 x:SF4702 2.7 5.0 1.0 FE2 x:SF4702 2.7 5.0 1.0 FE3 x:SF4702 2.7 5.0 1.0 CB x:CYS29 3.4 5.0 1.0 SG x:CYS38 3.7 7.7 1.0 S1 x:SF4702 3.9 5.0 1.0 CA x:CYS29 4.0 5.0 1.0 CD1 x:ILE39 4.1 6.9 1.0 CD x:PRO30 4.6 5.0 1.0 CG1 x:ILE39 4.6 6.9 1.0 SG x:CYS58 4.7 4.7 1.0 SG x:CYS61 4.8 5.0 1.0 C x:CYS29 4.8 5.0 1.0 N x:PRO30 4.8 5.0 1.0 CB x:CYS38 4.8 7.7 1.0 CB x:CYS61 4.8 5.0 1.0 SG x:CYS55 4.9 6.0 1.0 CG2 x:VAL31 5.0 4.8 1.0

Iron binding site 6 out of 8 in the Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex within 5.0Å range: probe atom residue distance (Å) B Occ x:Fe702 b:5.0 occ:1.00 FE2 x:SF4702 0.0 5.0 1.0 SG x:CYS55 2.3 6.0 1.0 S4 x:SF4702 2.3 5.0 1.0 S1 x:SF4702 2.3 5.0 1.0 S3 x:SF4702 2.3 5.0 1.0 FE3 x:SF4702 2.7 5.0 1.0 FE1 x:SF4702 2.7 5.0 1.0 FE4 x:SF4702 2.7 5.0 1.0 CB x:CYS55 3.3 6.0 1.0 CA x:CYS55 3.8 6.0 1.0 S2 x:SF4702 3.9 5.0 1.0 N x:GLY57 3.9 5.0 1.0 N x:ILE56 4.2 4.8 1.0 CB x:ALA9 4.3 3.7 1.0 SG x:CYS38 4.3 7.7 1.0 C x:CYS55 4.3 6.0 1.0 CA x:GLY57 4.4 5.0 1.0 SG x:CYS61 4.8 5.0 1.0 N x:CYS58 4.8 4.7 1.0 CG2 x:ILE50 4.8 5.0 1.0 SG x:CYS29 4.8 5.0 1.0 SG x:CYS58 4.8 4.7 1.0 N x:ALA9 4.9 3.7 1.0 C x:ILE56 5.0 4.8 1.0

Iron binding site 7 out of 8 in the Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex within 5.0Å range: probe atom residue distance (Å) B Occ x:Fe702 b:5.0 occ:1.00 FE3 x:SF4702 0.0 5.0 1.0 SG x:CYS61 2.2 5.0 1.0 S1 x:SF4702 2.3 5.0 1.0 S4 x:SF4702 2.3 5.0 1.0 S2 x:SF4702 2.3 5.0 1.0 FE2 x:SF4702 2.7 5.0 1.0 FE4 x:SF4702 2.7 5.0 1.0 FE1 x:SF4702 2.7 5.0 1.0 CB x:CYS61 3.0 5.0 1.0 S3 x:SF4702 3.9 5.0 1.0 N x:CYS61 3.9 5.0 1.0 CB x:ALA9 4.0 3.7 1.0 CA x:CYS61 4.1 5.0 1.0 SG x:CYS55 4.6 6.0 1.0 SG x:CYS58 4.7 4.7 1.0 CD1 x:ILE39 4.7 6.9 1.0 N x:GLY59 4.8 5.0 1.0 SG x:CYS29 4.8 5.0 1.0 N x:ILE60 4.9 4.9 1.0

Iron binding site 8 out of 8 in the Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Structure of A Crosslinked Yeast ABCE1-Bound 43S Pre-Initiation Complex within 5.0Å range: probe atom residue distance (Å) B Occ x:Fe702 b:5.0 occ:1.00 FE4 x:SF4702 0.0 5.0 1.0 SG x:CYS58 2.2 4.7 1.0 S2 x:SF4702 2.3 5.0 1.0 S1 x:SF4702 2.3 5.0 1.0 S3 x:SF4702 2.3 5.0 1.0 FE3 x:SF4702 2.7 5.0 1.0 FE1 x:SF4702 2.7 5.0 1.0 FE2 x:SF4702 2.7 5.0 1.0 N x:CYS58 3.6 4.7 1.0 CB x:CYS58 3.7 4.7 1.0 N x:GLY59 3.8 5.0 1.0 S4 x:SF4702 3.9 5.0 1.0 CA x:CYS58 4.1 4.7 1.0 CD x:PRO30 4.4 5.0 1.0 N x:ILE60 4.4 4.9 1.0 C x:CYS58 4.4 4.7 1.0 N x:GLY57 4.5 5.0 1.0 SG x:CYS29 4.5 5.0 1.0 C x:GLY57 4.5 5.0 1.0 CG x:PRO30 4.6 5.0 1.0 SG x:CYS61 4.6 5.0 1.0 SG x:CYS55 4.6 6.0 1.0 CG1 x:ILE56 4.6 4.8 1.0 CA x:GLY57 4.7 5.0 1.0 CA x:GLY59 4.8 5.0 1.0 N x:CYS61 4.8 5.0 1.0 CB x:ILE60 5.0 4.9 1.0

H.Kratzat, T.Mackens-Kiani, A.Ameismeier, J.Cheng, E.Dacheux, A.Namane, O.Berninghausen, M.Fromont-Racine, T.Becker, R.Beckmann. Structural Inventory of Native Ribosomal ABCE1-43S Pre-Initiation Complexes To Be Published.