Iron in PDB 7a4l: Pre-Only Solution Structure of the Iron-Sulfur Protein Pioc From Rhodopseudomonas Palustris Tie-1

The binding sites of Iron atom in the Pre-Only Solution Structure of the Iron-Sulfur Protein Pioc From Rhodopseudomonas Palustris Tie-1 (pdb code 7a4l). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Pre-Only Solution Structure of the Iron-Sulfur Protein Pioc From Rhodopseudomonas Palustris Tie-1, PDB code: 7a4l:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Pre-Only Solution Structure of the Iron-Sulfur Protein Pioc From Rhodopseudomonas Palustris Tie-1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Pre-Only Solution Structure of the Iron-Sulfur Protein Pioc From Rhodopseudomonas Palustris Tie-1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe101 b:0.7 occ:1.00 FE1 A:SF4101 0.0 0.7 1.0 S4 A:SF4101 2.1 0.8 1.0 S2 A:SF4101 2.2 0.7 1.0 FE3 A:SF4101 2.3 0.6 1.0 S3 A:SF4101 2.3 0.8 1.0 SG A:CYS34 2.4 0.7 1.0 HD12 A:ILE41 2.7 3.0 1.0 FE2 A:SF4101 2.7 0.7 1.0 FE4 A:SF4101 2.8 0.6 1.0 HB2 A:CYS34 2.9 0.8 1.0 HD13 A:ILE41 3.1 3.4 1.0 HD11 A:ILE41 3.1 3.7 1.0 CD1 A:ILE41 3.1 2.7 1.0 CB A:CYS34 3.2 0.7 1.0 HB A:VAL37 3.4 2.3 1.0 H A:VAL37 3.7 1.2 1.0 HB3 A:CYS34 3.7 0.8 1.0 HB A:THR36 3.7 1.9 1.0 SG A:CYS22 3.8 0.8 1.0 HG22 A:VAL37 3.8 2.1 1.0 S1 A:SF4101 3.8 0.6 1.0 HG21 A:VAL37 3.9 2.1 1.0 HB3 A:CYS22 4.2 0.9 1.0 CG2 A:VAL37 4.2 1.9 1.0 CB A:VAL37 4.2 1.9 1.0 HA A:PHE28 4.3 0.8 1.0 HA A:CYS22 4.3 0.8 1.0 H A:ILE35 4.3 1.6 1.0 H A:THR36 4.4 1.3 1.0 N A:VAL37 4.5 1.5 1.0 HD1 A:PHE28 4.5 3.0 1.0 CB A:CYS22 4.5 0.9 1.0 CA A:CYS34 4.6 0.7 1.0 HA A:CYS34 4.6 0.8 1.0 CG1 A:ILE41 4.6 1.4 1.0 HB2 A:PHE28 4.7 1.1 1.0 CB A:THR36 4.8 1.9 1.0 H A:ALA51 4.8 3.5 1.0 SG A:CYS47 4.8 1.1 1.0 HB3 A:CYS47 4.8 1.1 1.0 HG13 A:ILE41 5.0 2.1 1.0 SG A:CYS25 5.0 0.7 1.0 CA A:CYS22 5.0 0.8 1.0

Iron binding site 2 out of 4 in the Pre-Only Solution Structure of the Iron-Sulfur Protein Pioc From Rhodopseudomonas Palustris Tie-1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Pre-Only Solution Structure of the Iron-Sulfur Protein Pioc From Rhodopseudomonas Palustris Tie-1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe101 b:0.7 occ:1.00 FE2 A:SF4101 0.0 0.7 1.0 S3 A:SF4101 2.2 0.8 1.0 S1 A:SF4101 2.2 0.6 1.0 S4 A:SF4101 2.3 0.8 1.0 SG A:CYS25 2.4 0.7 1.0 FE3 A:SF4101 2.6 0.6 1.0 FE4 A:SF4101 2.6 0.6 1.0 FE1 A:SF4101 2.7 0.7 1.0 HB3 A:CYS25 3.0 1.7 1.0 HA A:CYS22 3.1 0.8 1.0 CB A:CYS25 3.2 1.1 1.0 HB2 A:TYR50 3.2 2.1 1.0 HB2 A:CYS25 3.3 1.6 1.0 HB3 A:TYR50 3.6 2.2 1.0 HB2 A:PHE28 3.6 1.1 1.0 S2 A:SF4101 3.8 0.7 1.0 CB A:TYR50 3.9 1.6 1.0 H A:ALA51 4.0 3.5 1.0 HA A:PHE28 4.1 0.8 1.0 H A:PHE28 4.2 1.3 1.0 SG A:CYS22 4.2 0.8 1.0 HA A:TYR50 4.2 2.5 1.0 CA A:CYS22 4.2 0.8 1.0 HA A:TRP46 4.3 3.0 1.0 H A:GLY23 4.3 1.9 1.0 H A:ARG26 4.3 1.7 1.0 H A:CYS47 4.4 2.0 1.0 N A:PHE28 4.4 0.8 1.0 SG A:CYS34 4.4 0.7 1.0 CB A:PHE28 4.5 0.8 1.0 SG A:CYS47 4.5 1.1 1.0 H A:CYS25 4.6 1.4 1.0 CA A:PHE28 4.6 0.7 1.0 CB A:CYS22 4.6 0.9 1.0 HB3 A:CYS22 4.6 0.9 1.0 CA A:TYR50 4.6 1.7 1.0 CA A:CYS25 4.7 1.4 1.0 HD1 A:TRP46 4.7 4.8 1.0 O A:ARG21 4.7 0.9 1.0 HD12 A:ILE41 4.7 3.0 1.0 HD11 A:ILE41 4.8 3.7 1.0 HD1 A:PHE28 4.8 3.0 1.0 N A:ALA51 4.9 3.6 1.0 N A:GLY23 4.9 1.2 1.0 HB2 A:CYS34 5.0 0.8 1.0 N A:CYS22 5.0 0.9 1.0 HB1 A:ALA51 5.0 5.8 1.0

Iron binding site 3 out of 4 in the Pre-Only Solution Structure of the Iron-Sulfur Protein Pioc From Rhodopseudomonas Palustris Tie-1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Pre-Only Solution Structure of the Iron-Sulfur Protein Pioc From Rhodopseudomonas Palustris Tie-1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe101 b:0.6 occ:1.00 FE3 A:SF4101 0.0 0.6 1.0 SG A:CYS22 1.9 0.8 1.0 S2 A:SF4101 2.1 0.7 1.0 S4 A:SF4101 2.2 0.8 1.0 S1 A:SF4101 2.3 0.6 1.0 FE1 A:SF4101 2.3 0.7 1.0 FE4 A:SF4101 2.5 0.6 1.0 FE2 A:SF4101 2.6 0.7 1.0 HD12 A:ILE41 2.8 3.0 1.0 HA A:CYS22 2.9 0.8 1.0 HA A:TRP46 3.1 3.0 1.0 CB A:CYS22 3.2 0.9 1.0 H A:TRP46 3.2 1.3 1.0 HB3 A:CYS22 3.4 0.9 1.0 S3 A:SF4101 3.5 0.8 1.0 CA A:CYS22 3.6 0.8 1.0 HD11 A:ILE41 3.7 3.7 1.0 CD1 A:ILE41 3.7 2.7 1.0 CA A:TRP46 3.8 2.3 1.0 H A:CYS47 3.8 2.0 1.0 N A:TRP46 3.9 1.4 1.0 C A:TRP46 4.0 1.9 1.0 HB3 A:CYS47 4.0 1.1 1.0 N A:CYS47 4.0 1.8 1.0 HB2 A:CYS22 4.1 1.1 1.0 HG22 A:VAL37 4.1 2.1 1.0 N A:CYS22 4.2 0.9 1.0 HD13 A:ILE41 4.3 3.4 1.0 HB3 A:CYS25 4.4 1.7 1.0 SG A:CYS47 4.5 1.1 1.0 H A:CYS22 4.6 1.2 1.0 O A:TRP46 4.6 1.9 1.0 CB A:CYS47 4.7 1.2 1.0 HG21 A:VAL37 4.7 2.1 1.0 SG A:CYS34 4.7 0.7 1.0 HB2 A:CYS34 4.8 0.8 1.0 HA3 A:GLY45 4.8 2.3 1.0 HG12 A:ILE41 4.8 2.5 1.0 SG A:CYS25 4.8 0.7 1.0 HB A:VAL37 4.8 2.3 1.0 C A:CYS22 4.9 1.1 1.0 CG1 A:ILE41 4.9 1.4 1.0 CG2 A:VAL37 4.9 1.9 1.0 HB3 A:TYR50 4.9 2.2 1.0 C A:ARG21 4.9 0.8 1.0 HD1 A:TRP46 4.9 4.8 1.0 HB2 A:PHE28 5.0 1.1 1.0

Iron binding site 4 out of 4 in the Pre-Only Solution Structure of the Iron-Sulfur Protein Pioc From Rhodopseudomonas Palustris Tie-1


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Pre-Only Solution Structure of the Iron-Sulfur Protein Pioc From Rhodopseudomonas Palustris Tie-1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe101 b:0.6 occ:1.00 FE4 A:SF4101 0.0 0.6 1.0 SG A:CYS47 2.2 1.1 1.0 S1 A:SF4101 2.2 0.6 1.0 S3 A:SF4101 2.2 0.8 1.0 S2 A:SF4101 2.3 0.7 1.0 FE3 A:SF4101 2.5 0.6 1.0 FE2 A:SF4101 2.6 0.7 1.0 FE1 A:SF4101 2.8 0.7 1.0 HB3 A:CYS47 2.9 1.1 1.0 HB3 A:TYR50 3.1 2.2 1.0 HA A:TYR50 3.1 2.5 1.0 CB A:CYS47 3.1 1.2 1.0 H A:CYS47 3.2 2.0 1.0 N A:CYS47 3.5 1.8 1.0 HB A:THR36 3.6 1.9 1.0 HB2 A:TYR50 3.7 2.1 1.0 CB A:TYR50 3.8 1.6 1.0 S4 A:SF4101 3.8 0.8 1.0 CA A:CYS47 3.9 1.6 1.0 CA A:TYR50 3.9 1.7 1.0 HB2 A:CYS47 4.0 1.4 1.0 HA A:TRP46 4.0 3.0 1.0 H A:ALA51 4.1 3.5 1.0 HG21 A:THR36 4.2 3.1 1.0 C A:TRP46 4.2 1.9 1.0 HG1 A:THR36 4.3 2.2 1.0 HG21 A:VAL37 4.3 2.1 1.0 SG A:CYS22 4.3 0.8 1.0 SG A:CYS34 4.4 0.7 1.0 HB2 A:CYS25 4.5 1.6 1.0 O A:CYS47 4.5 2.5 1.0 CB A:THR36 4.5 1.9 1.0 C A:CYS47 4.6 1.9 1.0 HB3 A:CYS25 4.6 1.7 1.0 HD12 A:ILE41 4.6 3.0 1.0 N A:TYR50 4.7 1.3 1.0 SG A:CYS25 4.7 0.7 1.0 HG22 A:VAL37 4.7 2.1 1.0 HG22 A:THR36 4.7 3.7 1.0 CG2 A:THR36 4.7 2.8 1.0 CA A:TRP46 4.7 2.3 1.0 HA A:CYS47 4.8 1.5 1.0 HA A:CYS22 4.8 0.8 1.0 CB A:CYS25 4.9 1.1 1.0 H A:TYR50 4.9 1.5 1.0 N A:ALA51 4.9 3.6 1.0 OG1 A:THR36 4.9 2.1 1.0 O A:TRP46 4.9 1.9 1.0

I.B.Trindade, M.Invernici, F.Cantini, R.O.Louro, M.Piccioli. Pre-Driven Protein uc(Nmr) Structures: An Alternative Approach in Highly Paramagnetic Systems. Febs J. 2020.
ISSN: ISSN 1742-464X
PubMed: 33124176
DOI: 10.1111/FEBS.15615