Iron in PDB 7a4m: Cryo-Em Structure of Mouse Heavy-Chain Apoferritin at 1.22 A

Enzymatic activity of Cryo-Em Structure of Mouse Heavy-Chain Apoferritin at 1.22 A

All present enzymatic activity of Cryo-Em Structure of Mouse Heavy-Chain Apoferritin at 1.22 A:
1.16.3.1;

Other elements in 7a4m:

The structure of Cryo-Em Structure of Mouse Heavy-Chain Apoferritin at 1.22 A also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Cryo-Em Structure of Mouse Heavy-Chain Apoferritin at 1.22 A (pdb code 7a4m). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Cryo-Em Structure of Mouse Heavy-Chain Apoferritin at 1.22 A, PDB code: 7a4m:

Iron binding site 1 out of 1 in 7a4m

Go back to Iron Binding Sites List in 7a4m
Iron binding site 1 out of 1 in the Cryo-Em Structure of Mouse Heavy-Chain Apoferritin at 1.22 A


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of Mouse Heavy-Chain Apoferritin at 1.22 A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:23.5
occ:0.25
HE2 A:HIS173 2.3 28.0 0.0
HE2 A:HIS173 2.3 28.0 0.0
NE2 A:HIS173 3.2 25.1 0.5
NE2 A:HIS173 3.2 18.8 0.5
HD21 A:LEU169 3.4 18.4 1.0
HD22 A:LEU169 3.7 18.6 1.0
HE1 A:HIS173 3.8 26.7 0.5
CE1 A:HIS173 3.9 27.8 0.5
CD2 A:LEU169 4.0 18.8 1.0
HD13 A:LEU169 4.1 19.7 1.0
CE1 A:HIS173 4.1 18.6 0.5
HE1 A:HIS173 4.1 18.5 0.5
CD2 A:HIS173 4.2 19.2 0.5
CD2 A:HIS173 4.2 21.8 0.5
HD2 A:HIS173 4.3 18.8 0.5
HD2 A:HIS173 4.5 22.1 0.5
HD23 A:LEU169 4.7 18.8 1.0
CD1 A:LEU169 4.8 20.2 1.0
HD12 A:LEU169 4.8 19.6 1.0

Reference:

T.Nakane, A.Kotecha, A.Sente, G.Mcmullan, S.Masiulis, P.M.G.E.Brown, I.T.Grigoras, L.Malinauskaite, T.Malinauskas, J.Miehling, T.Uchanski, L.Yu, D.Karia, E.V.Pechnikova, E.De Jong, J.Keizer, M.Bischoff, J.Mccormack, P.Tiemeijer, S.W.Hardwick, D.Y.Chirgadze, G.Murshudov, A.R.Aricescu, S.H.W.Scheres. Single-Particle Cryo-Em at Atomic Resolution. Nature V. 587 152 2020.
ISSN: ESSN 1476-4687
PubMed: 33087931
DOI: 10.1038/S41586-020-2829-0
Page generated: Sun Dec 13 18:33:57 2020

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