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Iron in PDB 7cuq: 2.55-Angstrom Cryo-Em Structure of Cytochrome BO3 From Escherichia Coli in Native Membrane

Enzymatic activity of 2.55-Angstrom Cryo-Em Structure of Cytochrome BO3 From Escherichia Coli in Native Membrane

All present enzymatic activity of 2.55-Angstrom Cryo-Em Structure of Cytochrome BO3 From Escherichia Coli in Native Membrane:
7.1.1.3;

Other elements in 7cuq:

The structure of 2.55-Angstrom Cryo-Em Structure of Cytochrome BO3 From Escherichia Coli in Native Membrane also contains other interesting chemical elements:

Copper (Cu) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the 2.55-Angstrom Cryo-Em Structure of Cytochrome BO3 From Escherichia Coli in Native Membrane (pdb code 7cuq). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the 2.55-Angstrom Cryo-Em Structure of Cytochrome BO3 From Escherichia Coli in Native Membrane, PDB code: 7cuq:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 7cuq

Go back to Iron Binding Sites List in 7cuq
Iron binding site 1 out of 2 in the 2.55-Angstrom Cryo-Em Structure of Cytochrome BO3 From Escherichia Coli in Native Membrane


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of 2.55-Angstrom Cryo-Em Structure of Cytochrome BO3 From Escherichia Coli in Native Membrane within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1001

b:100.4
occ:1.00
FE A:HEM1001 0.0 100.4 1.0
ND A:HEM1001 2.0 100.4 1.0
NB A:HEM1001 2.0 100.4 1.0
NA A:HEM1001 2.0 100.4 1.0
NC A:HEM1001 2.0 100.4 1.0
NE2 A:HIS421 2.1 98.8 1.0
NE2 A:HIS106 2.1 101.6 1.0
CE1 A:HIS421 3.0 98.8 1.0
C1C A:HEM1001 3.0 100.4 1.0
C4B A:HEM1001 3.0 100.4 1.0
CE1 A:HIS106 3.0 101.6 1.0
C1A A:HEM1001 3.0 100.4 1.0
C4D A:HEM1001 3.1 100.4 1.0
C1D A:HEM1001 3.1 100.4 1.0
CD2 A:HIS106 3.1 101.6 1.0
C4A A:HEM1001 3.1 100.4 1.0
C1B A:HEM1001 3.1 100.4 1.0
C4C A:HEM1001 3.1 100.4 1.0
CD2 A:HIS421 3.1 98.8 1.0
CHC A:HEM1001 3.4 100.4 1.0
CHA A:HEM1001 3.4 100.4 1.0
CHD A:HEM1001 3.4 100.4 1.0
CHB A:HEM1001 3.4 100.4 1.0
ND1 A:HIS421 4.1 98.8 1.0
ND1 A:HIS106 4.2 101.6 1.0
CG A:HIS106 4.2 101.6 1.0
CG A:HIS421 4.2 98.8 1.0
C2C A:HEM1001 4.3 100.4 1.0
C2A A:HEM1001 4.3 100.4 1.0
C3D A:HEM1001 4.3 100.4 1.0
C2D A:HEM1001 4.3 100.4 1.0
C3B A:HEM1001 4.3 100.4 1.0
C3A A:HEM1001 4.3 100.4 1.0
C2B A:HEM1001 4.3 100.4 1.0
C3C A:HEM1001 4.3 100.4 1.0

Iron binding site 2 out of 2 in 7cuq

Go back to Iron Binding Sites List in 7cuq
Iron binding site 2 out of 2 in the 2.55-Angstrom Cryo-Em Structure of Cytochrome BO3 From Escherichia Coli in Native Membrane


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of 2.55-Angstrom Cryo-Em Structure of Cytochrome BO3 From Escherichia Coli in Native Membrane within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1002

b:105.3
occ:1.00
FE A:HEO1002 0.0 105.3 1.0
NA A:HEO1002 2.0 105.3 1.0
NC A:HEO1002 2.0 105.3 1.0
NB A:HEO1002 2.0 105.3 1.0
ND A:HEO1002 2.0 105.3 1.0
NE2 A:HIS419 2.1 100.2 1.0
CE1 A:HIS419 2.8 100.2 1.0
C1C A:HEO1002 3.0 105.3 1.0
C4D A:HEO1002 3.0 105.3 1.0
C1A A:HEO1002 3.0 105.3 1.0
C4B A:HEO1002 3.1 105.3 1.0
C4C A:HEO1002 3.1 105.3 1.0
C1D A:HEO1002 3.1 105.3 1.0
C1B A:HEO1002 3.1 105.3 1.0
C4A A:HEO1002 3.1 105.3 1.0
CD2 A:HIS419 3.2 100.2 1.0
CHC A:HEO1002 3.5 105.3 1.0
CHA A:HEO1002 3.5 105.3 1.0
CHD A:HEO1002 3.6 105.3 1.0
CHB A:HEO1002 3.6 105.3 1.0
ND1 A:HIS419 4.0 100.2 1.0
C3C A:HEO1002 4.2 105.3 1.0
C2C A:HEO1002 4.2 105.3 1.0
CG A:HIS419 4.3 100.2 1.0
C3D A:HEO1002 4.3 105.3 1.0
C3B A:HEO1002 4.3 105.3 1.0
C2A A:HEO1002 4.3 105.3 1.0
C2D A:HEO1002 4.3 105.3 1.0
C2B A:HEO1002 4.3 105.3 1.0
C3A A:HEO1002 4.3 105.3 1.0

Reference:

J.Li, R.B.Gennis, K.Zhang, J.P.Zhu. 2.55-Angstrom Cryo-Em Structure of Cytochrome BO3 From Escherichia Coli in Native Membrane To Be Published.
Page generated: Thu Aug 8 03:23:35 2024

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